New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2432323 =35 (0.780)4 (0.090) 4/264 NT 11.2% coding (618/1269 nt) folC bifunctional folylpolyglutamate synthase/ dihydrofolate synthase
?NC_000913 2432375 = 30 (0.700)coding (566/1269 nt) folC bifunctional folylpolyglutamate synthase/ dihydrofolate synthase

CGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCGCCCAGCCCTACTTCCAGAATCACCACGTCAAG  >  NC_000913/2432230‑2432523
                                                                                                                                                 |                                                                                                                                                    
cGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAGCAGTGCACCTTTTTCCTGCGCCCCATCAGCAATGGTAGAAGGCATTTCCAGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCtt                                                                                                                                                   >  2:356468/1‑149 (MQ=255)
 gCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGGTTTTCGCTGCGGAAGATGCCTGCttt                                                                                                                                                  >  2:373241/1‑149 (MQ=255)
   ccAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTtctc                                                                                                                                               <  1:120423/149‑1 (MQ=255)
    gacgccgatgtcgcggtagtaaccagtattgcgctggatcataccgactggctgggtccagatcgcgaaagtattggtcgcgagaaagaAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTtctc                                                                                                                                               >  1:170236‑M1/90‑149 (MQ=255)
      gTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTcgc                                                                                                                                             <  2:477165/149‑1 (MQ=255)
      gTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTcgc                                                                                                                                             <  1:614666/149‑1 (MQ=255)
       gccgatgtcgcggtagtaaccagtattgcgctggatcataccgactggctgggtccagatcgcgaaagtattggtcgcgagaaagcAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTcgcg                                                                                                                                            >  2:139583‑M1/87‑149 (MQ=255)
        cATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGTCGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCCCCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTcgcgc                                                                                                                                           <  2:738331/149‑2 (MQ=255)
            acgggTGACCGGATAGGTGCACTCAACGCCCCGCCGTTGTAACGGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCaa                                                                                                                                       <  2:472819/146‑1 (MQ=255)
                       aaTAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGa                                                                                                                            <  2:581413/149‑1 (MQ=255)
                            ttCCACTCAACGCCCCGACGTTGTGACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTgg                                                                                                                       >  1:595488/1‑149 (MQ=255)
                            ttCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTACCGGTTTTTCGCTGCGGAAGATGCCCGCTTTCTCGCGACCAAACCTCTCGCGATCTgg                                                                                                                       >  2:268743/1‑149 (MQ=255)
                                aCTCAACGCCCCGACGTTGTAACAGTGCGCCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATCTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGAccc                                                                                                                   >  1:481599/1‑149 (MQ=255)
                                aCTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGAccc                                                                                                                   >  1:175390/1‑149 (MQ=255)
                                           cGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGTACGCAAACACGGCGATCCGCCAAGTGCCGGTTTTTCGCTGCAGAAGATGCGTGCTTTCTCGGGACCAATACTTTCGCGATCTGGACCGCGCCAGACggc                                                                                                        >  2:332783/1‑148 (MQ=255)
                                           cGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGt                                                                                                        >  2:707613/1‑149 (MQ=255)
                                                    aaCAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAg                                                                                               <  1:649499/149‑1 (MQ=255)
                                                     aCAGTGCACCTGTTTCCTGCGCCCCCTCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAgc                                                                                              <  2:237786/149‑1 (MQ=255)
                                                                   tCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTtac                                                                                <  1:128862/149‑1 (MQ=255)
                                                                     cTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGAACCAGCCAGTCGGTATTTTCCAGCGCTATACTGGTtacta                                                                              <  2:73571/149‑1 (MQ=255)
                                                                         gcCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTCTGATCCAGCGCAATACTGGTTACTACcgc                                                                          >  1:468417/1‑149 (MQ=255)
                                                                         gcCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGATGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCCGCCAGTCGGTATGATCCGGCGCAATACTGGGTACCACagc                                                                          >  2:464766/1‑149 (MQ=255)
                                                                               tCAGCAATGGTAGAAGGCACTGCCGCTCCCCCGACAATTGCCGTTTTCCCGCTGCGGATGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATc                                                                    <  2:317970/149‑1 (MQ=255)
                                                                                  cgcgagaaagcaggcatcttccgcagcgaaaaaccggcaattgtcggtgagccggaaatgcctGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGc                                                                 >  2:139583‑M2/64‑149 (MQ=255)
                                                                                     gagaaagcaggcatcttccgcagcgaaaaaccggcaattgtcggtgagccggaaatgcctTCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTc                                                              >  1:170236‑M2/61‑149 (MQ=255)
                                                                                            aaGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAata                                                       <  1:460486/149‑1 (MQ=255)
                                                                                            aaGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAata                                                       <  1:373241/149‑1 (MQ=255)
                                                                                             aggcatcttccgcagcgaaaaaccggcaattgttggtgagccggaaatgcctGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGCCGACAatat                                                      >  2:434555‑M2/53‑149 (MQ=255)
                                                                                                cATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGACTATGCCCGCCTTCTCGCGACCCATGATTTCTCGATCTGAGCCCAGCCCGTCGGTATCCTCCAGACCAATCCTGGCTACTCCCGCGACATCCGCCCCCACACTATTgg                                                   >  2:216503/1‑149 (MQ=255)
                                                                                                CATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTgg                                                   <  1:775129‑M1/149‑1 (MQ=255)
                                                                                                        gCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTcc                                           <  1:356468/149‑1 (MQ=255)
                                                                                                           cACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAga                                        >  1:288852/1‑149 (MQ=255)
                                                                                                                 cAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCg                                  <  2:311801/149‑1 (MQ=255)
                                                                                                                  aaTTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGACCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCGc                                 >  1:403189/1‑149 (MQ=255)
                                                                                                                    ttGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCGccc                               >  2:533161/1‑149 (MQ=255)
                                                                                                                    ttGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGGATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTGCAGACGACCGccc                               >  2:641924/1‑149 (MQ=255)
                                                                                                                       caattgtcggtgagccggaaatgcctGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCGCCCAGc                            <  1:139583‑M2/123‑1 (MQ=255)
                                                                                                                                 gCTGCGGAAGATGCCTGTTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCTGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCGCCCAGCCCTACTTCCa                  <  1:332783/149‑1 (MQ=255)
                                                                                                                                 gCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCGCCCAGCCCTACTTCCa                  <  1:707613/149‑1 (MQ=255)
                                                                                                                                        aaGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCGCCCAGCCCTACTTCCAGAATcac           >  1:138832/1‑149 (MQ=255)
                                                                                                                                              cctGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCGCCCAGCCCTCCTTCCAGAATCACCCCGTc     >  1:375567‑M2/4‑149 (MQ=255)
                                                                                                                                              cctGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCGCCCAGCCCTACTTCCAGAATCACCACGTc     >  2:795085‑M2/4‑149 (MQ=255)
                                                                                                                                                 gCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCGCCCAGCCCTACTTCCAGAATCACCACGTCAAg  <  1:349302/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CGCCCAGTCATGATCGGTGACGGAATAGTTCCACTCAACGCCCCGACGTTGTAACAGTGCACCTTTTTCCTGCGCCACATCAGCAATGGTAGAAGGCATTTCCGGCTCACCGACAATTGCCGGTTTTTCGCTGCGGAAGATGCCTGCTTTCTCGCGACCAATACTTTCGCGATCTGGACCCAGCCAGTCGGTATGATCCAGCGCAATACTGGTTACTACCGCGACATCGGCGTCGACAATATTGGTTGCGTCCAGACGACCGCCCAGCCCTACTTCCAGAATCACCACGTCAAG  >  NC_000913/2432230‑2432523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.