BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4136023 =	107 (1.000)	5 (0.050)	4/278	16.5	4.6%	intergenic (+9/‑84)	katG/yijE	catalase‑peroxidase HPI, heme b‑containing/EamA‑like transporter family protein
*	?	NC_000913	4136057 =	107 (1.060)	5 (0.050)	4/278	16.5	4.6%	intergenic (+43/‑50)	katG/yijE	catalase‑peroxidase HPI, heme b‑containing/EamA‑like transporter family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 120 total aligned reads displayed.

GGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACC  >  NC_000913/4135909‑4136205

ggTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGt                                                                                                                                                      >  1:1462880/1‑149 (MQ=255)

 gTGGCGGAAGTTTACGCCAGTAGCGATGCCAACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGtt                                                                                                                                                     <  2:1690359/149‑1 (MQ=255)

  tGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTc                                                                                                                                                    >  1:376598/1‑149 (MQ=255)

  tGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTc                                                                                                                                                    <  1:1120901/149‑1 (MQ=255)

  tGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTc                                                                                                                                                    >  2:1520534/1‑149 (MQ=255)

  tGGCGGAAGGTTACGCCAGTAGGGGTGCCCACGAGAAGTGTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGACCCTCGAGCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTc                                                                                                                                                    <  2:1093052/149‑1 (MQ=255)

    gCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAACGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGCTCAGCGGCTGCTTGCTGGCGGCCGCTGCACGCTCtt                                                                                                                                                  >  2:943886/1‑149 (MQ=255)

    gCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCtt                                                                                                                                                  <  1:1364247/149‑1 (MQ=255)

     cGGAGGTTTACGCCANTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGTGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACTTGCTGTAATCTGACCCCGCTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCttt                                                                                                                                                 <  1:1426964/149‑1 (MQ=255)

     cGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGATCCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCttt                                                                                                                                                 <  1:691077/149‑1 (MQ=255)

      ggAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGCTCtttc                                                                                                                                                >  2:343517/1‑148 (MQ=255)

       gAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTAc                                                                                                                                               <  1:516116/149‑1 (MQ=255)

        aaGTTTACGCCAGTAGCGATGGCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTAcc                                                                                                                                              <  2:115480/149‑1 (MQ=255)

           tttACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTGATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTAACAGc                                                                                                                                           >  2:1658484/1‑149 (MQ=255)

             tACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGt                                                                                                                                         <  2:688562/149‑1 (MQ=255)

                gCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGtata                                                                                                                                      >  2:1014503/1‑149 (MQ=255)

                 ccAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGTCAGTCGCTGGACGTTCTTTACCAGCGtatac                                                                                                                                     <  2:1302604/149‑2 (MQ=255)

                  cAGTAGCGATGCCCACGAGAAGTTTGTTAAGGACTTCGTGGCGGCATGGGTGAAGGTGATGTATCTTGCCGGTTTTGGCGTGTTGTGATGTGGGCCGGTTCGGCGGGTTCTTGCTGGCGGTGGCTGGACGGTCTTTTCCCGCGTGTAGt                                                                                                                                    >  2:1168069/1‑149 (MQ=255)

                         gATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGACCCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGcgaa                                                                                                                             <  1:1510393/149‑1 (MQ=255)

                         gATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGcgaa                                                                                                                             <  1:1509864/149‑1 (MQ=255)

                               cACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTGGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTGGCTGAAAGTTCTTTACCAGCGTATAGTGGGcgcacgaaca                                                                                                                       >  2:137995/1‑147 (MQ=255)

                                  gagaAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTa                                                                                                                    >  2:1142419/1‑149 (MQ=255)

                                       gTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTacacac                                                                                                               >  2:1285076/1‑149 (MQ=255)

                                        tttGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACt                                                                                                              >  1:1035920/1‑149 (MQ=255)

                                           gTTAAAGACTTTGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGa                                                                                                           >  2:1319822/1‑149 (MQ=255)

                                            ttAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCATATAGTGGGCGAACGAAAACTACACACTGGAt                                                                                                          >  2:1001262/1‑149 (MQ=255)

                                              aaaGACCTCGTGGCGGCATGGGTGAAAGTGATTAATCTCGACCTTTTCGACCTGCTGTAATCTGACGCCGTTCAGCGGCTGCTTGCTGGCAGTCGCGGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtct                                                                                                        <  1:41826/149‑1 (MQ=255)

                                                aGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtctct                                                                                                      <  2:1454192/149‑1 (MQ=255)

                                                   cTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCAt                                                                                                   <  1:302631/149‑1 (MQ=255)

                                                    ttCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATg                                                                                                  >  2:103379/1‑149 (MQ=255)

                                                     tCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTCCCAGCGTATAGTGGGCGACCGAAAACTACTCACTGGATCTCGGATGt                                                                                                 >  2:1506409/1‑149 (MQ=255)

                                                      cGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACGACAAACTGGAtccctcgcgtc                                                                                                >  2:1279615/1‑144 (MQ=255)

                                                          gcggcATGGTTGAAAGTTTTGACCCTCGACCGTTTCGACATGCTGTAGTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGTTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGcc                                                                                            <  2:1515276/149‑1 (MQ=255)

                                                             gcATGGTTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCa                                                                                         <  2:210225/149‑1 (MQ=255)

                                                             gcATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTCCCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCa                                                                                         <  1:249279/149‑1 (MQ=255)

                                                             gcATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCa                                                                                         <  1:285662/149‑1 (MQ=255)

                                                                  ggTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGaaa                                                                                    >  2:1003973/1‑149 (MQ=255)

                                                                   gTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAATAAATCCTTTACGCTGGATCTCTCAGGTCTGCCGCAGGAAag                                                                                   <  1:432513/149‑1 (MQ=255)

                                                                   gTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAACTCTCATGTCTGCCGCAGGAAag                                                                                   >  2:577849/1‑149 (MQ=255)

                                                                    tGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAaga                                                                                  <  1:1382313/149‑1 (MQ=255)

                                                                             tgaCCCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTGCAGCGGCTGCTGGCTGGCAGTCGCTGAACGTTCTCTACCAGCGTATAGTGGGCGAACGAAAACGACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCAc                                                                         <  2:27219/149‑1 (MQ=255)

                                                                              gaACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGc                                                                                          <  2:778352/131‑1 (MQ=255)

                                                                              gaACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGc                                                                                          >  1:778352/1‑131 (MQ=255)

                                                                               aaCCTCGCCCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTCCCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTg                                                                       <  2:346606/149‑1 (MQ=255)

                                                                                 ccTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATCGTGGCCGAACGAAAACTACGCCCTGGATCTCTCATGTCTGCCGCAGGAAAGAGCACCCCACTGGc                                                                     >  1:582017/1‑149 (MQ=255)

                                                                                 ccTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGc                                                                     >  1:1285406/1‑149 (MQ=255)

                                                                                   tCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGcca                                                                   >  1:84016/1‑147 (MQ=255)

                                                                                    cggccttttCGACCTGTTGTAATCTGACCCCGTCCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAAt                                                                  <  2:456208/143‑1 (MQ=255)

                                                                                    cGACCGTTTCGGCCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCACGCATGCCGCAGGAAAGAGCAACCCACTGGCAAt                                                                  <  1:1316268/149‑1 (MQ=255)

                                                                                     gACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATc                                                                 >  2:1685554/1‑149 (MQ=255)

                                                                                      aCCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCa                                                                <  1:103379/149‑1 (MQ=255)

                                                                                       ccGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAg                                                               <  2:1574530/149‑1 (MQ=255)

                                                                                          tttCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTgg                                                            >  1:1469871/1‑149 (MQ=255)

                                                                                             cGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGACGCCGAACTGTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCt                                                         <  1:500004/149‑1 (MQ=255)

                                                                                              caCCTCCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTg                                                        <  1:542784/148‑1 (MQ=255)

                                                                                                 ctgctgTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGtt                                                     >  1:1076462/1‑149 (MQ=255)

                                                                                                   gctgTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTGTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATGGCTCATGTCTGCTGCAGCAAAGCGCAACCCCCTGGCCATCAGTGGCCTGGtgat                                                   >  2:1145716/1‑146 (MQ=255)

                                                                                                      gTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCGTGGTTGTGCt                                                >  1:970993/1‑149 (MQ=255)

                                                                                                       tAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTc                                               >  1:169679/1‑149 (MQ=255)

                                                                                                       tAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTc                                               >  2:1255436/1‑149 (MQ=255)

                                                                                                        aaTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTca                                              >  2:667784/1‑149 (MQ=255)

                                                                                                        aaTCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCAAGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTca                                              <  1:1014503/149‑1 (MQ=255)

                                                                                                           cTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCacac                                           <  2:376598/149‑1 (MQ=255)

                                                                                                           cTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCacac                                           <  1:1665207/149‑1 (MQ=255)

                                                                                                                 acGTTCAGCGGCCCCCAGCTGGCAGTCGCTGAACGTTCTTTACACAAGTCGGGCGGGCGAACGAAAACCAGACACTGGACCTCTCATGTCTCCCGCAGGAAAGAGCCACAAACTGGCAACCAGTGGCCTGGTTGTGCTCACACTGATCt                                     >  2:744972/2‑149 (MQ=255)

                                                                                                                  cGTTCCACGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTGCCAGCGTATAGTGGTCTAACGAAAACTACACACTGGATCTCGCATGGCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTg                                    >  2:1490272/1‑149 (MQ=255)

                                                                                                                  cGTTCAGCGGCTGGTTGCTGGCAGTCGCTGGCCACTCTTTACCAGCGTATAGTGGGCGAACGAACACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTg                                    <  2:136511/149‑1 (MQ=255)

                                                                                                                  cGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTg                                    >  1:509233/1‑149 (MQ=255)

                                                                                                                     cgcgCGGCTCCTGCCTGGCAGCCGCTGAACGTTCTTGACCAGCGTATGGTGGGCGAACGAAAACTACCCACGGGATCTCGCATGTCTGCCGCAGGAAAGAGCAACCCACTTGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAg                                 <  1:455757/146‑1 (MQ=255)

                                                                                                                      cAGCGGCTGCTTGCTGGCAGTCGCTTAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGt                                <  1:1249362/149‑1 (MQ=255)

                                                                                                                         cGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTtat                             >  1:627276/1‑149 (MQ=255)

                                                                                                                             tgcttgctGTCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCCCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCt                         <  1:343517/149‑1 (MQ=255)

                                                                                                                               cttgctGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTgg                       <  1:1319822/149‑1 (MQ=255)

                                                                                                                                ttgctGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGa                      <  1:667784/149‑1 (MQ=255)

                                                                                                                                ttgctGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGGTATAGCTggg                      >  2:326819/1‑148 (MQ=255)

                                                                                                                                ttgctGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAAACACCTAGTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGa                      >  1:855892/1‑149 (MQ=255)

                                                                                                                                ttgctGGCAGTCGCGTAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGa                      <  1:170882/149‑1 (MQ=255)

                                                                                                                                    tGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCACTTAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGAtttt                  <  1:1393218/149‑1 (MQ=255)

                                                                                                                                    tGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATATCTCATGTCTGCCGCAGGAAAGAGCAAAAGATCCTGAATTCTTGGCCTGGTTGTGCTCACACTTATCTGGAGTGATAGCTGGAtttt                  >  1:51844/1‑149 (MQ=255)

                                                                                                                                    cgccAGTCGCCGAACCTTCTTCACCACCGTAGACTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGAttct                  <  2:599093/146‑3 (MQ=255)

                                                                                                                                     ggCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTc                 <  1:1028845/149‑1 (MQ=255)

                                                                                                                                     ggCAGTCGATGAACATTCTTTACCAGCGTACAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTc                 <  2:1675268/149‑1 (MQ=255)

                                                                                                                                      gCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCa                <  1:225198/149‑1 (MQ=255)

                                                                                                                                      gCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGGGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCa                >  2:965721/1‑149 (MQ=255)

                                                                                                                                      gCAGTCGCTGAACGTTCTTCACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCa                <  1:917065/149‑1 (MQ=255)

                                                                                                                                       cAGTCGCTGATCGGTCCTTACCAGCTGATAGTAGTCGGACGATAACTTCACGCTGGATCTCTCAGGGCTGCCGCAGGCGTGAGTATCCCACCGGCAATCAGTGGCCTGGTTGTGATTAAACTCCTCCGGAGTTATAGCTGGATTTTCAt               <  2:163960/149‑1 (MQ=255)

                                                                                                                                       cAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGGACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCAt               <  2:78337/149‑1 (MQ=255)

                                                                                                                                       cAGTCGCTGAACGTTCGTCACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCAt               <  1:813131/149‑1 (MQ=255)

                                                                                                                                        aGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATGGCTGGATTTTCATg              >  1:1611197/1‑149 (MQ=255)

                                                                                                                                        aGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATg              >  2:1347787/1‑149 (MQ=255)

                                                                                                                                            gCTGAACGTTCTTTACCGGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGGGGCCGGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGc          >  1:264284/1‑149 (MQ=255)

                                                                                                                                            gCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCCGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGc          >  2:852892/1‑149 (MQ=255)

                                                                                                                                             cTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCa         >  1:707469/1‑149 (MQ=255)

                                                                                                                                              tGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCGGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACCTATCTGGAGTTATAGCTGGATTTTCATGAAGCaa        <  1:1461665/149‑1 (MQ=255)

                                                                                                                                               gAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATGGATGGTTGTTGATGACGCAAg       >  2:280442/1‑149 (MQ=255)

                                                                                                                                                aaCGTTCTTTACCAGCGTATAGTGGGCGAACGAAACCTACACACTGGATCACTCATGTCTGCCGCAGGCAAGAGCAACCCACTGGCCATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGt      >  2:208422/1‑149 (MQ=255)

                                                                                                                                                aaCGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTCATAGCTGGATTTTCATGAAGCAAGt      >  2:229131/1‑149 (MQ=255)

                                                                                                                                                aaCGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCACATGTCTGCCACAGACACGAGCAACCCACTGGCAATCAGTGGCCTGGCTGTGCCCACCCTTATCTGCACTCATAGCTGCACTGTCGCGAAGCCAGt      >  2:124612/1‑149 (MQ=255)

                                                                                                                                                 aCGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGCGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTc     >  1:1437980/1‑149 (MQ=255)

                                                                                                                                                   gTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCAc   >  1:1665255/1‑149 (MQ=255)

GGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACC  >  NC_000913/4135909‑4136205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.