New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4027517 =139 (3.280)4 (0.100) 4/262 NT 3.0% noncoding (197/281 nt) REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 4027549 = 129 (3.210)noncoding (229/281 nt) REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences
Rejected: Frequency below/above cutoff threshold.

Only 100 of 160 total aligned reads displayed.

CCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGC  >  NC_000913/4027369‑4027664
                                                                                                                                                    |                                                                                                                                                   
tgatggaacgcaaagacgttcagtttggtctggcgacgatgtgtatcggtctgggtcagggtattgcgacggtgtttgagcgggtttaaccacttgccggatgcggcgtgaacgccttatccggtctaccgatccggcaccaatgtagg                                                                                                                                                     <  1:411848‑M1/1‑1 (MQ=255)
ccGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCatgatg                                                                                                                                                     >  1:299885/1‑149 (MQ=255)
   ttgaacgcaaagacgttcagtttggtctggcgacgatgtgtatcggtctgggtcagggtattgcgacggtgtttgagcgggtttaaccacttgccggatgcggcgtgaacgccttatccggtctaccgatccggcaccaatgtagGCCt                                                                                                                                                  >  1:653639‑M1/146‑149 (MQ=255)
   tggaacgcaaagacgttcagtttggtctggcgacgatgtgtatcggtctgggtcagggtattgcgacggtgtttgagcgggtttaaccacttgccggatgcggcgtgaacgccttatccggtctaccgatccggcaccaatgtagGCCt                                                                                                                                                  <  1:460797‑M1/4‑1 (MQ=255)
    ggaacgccaagacgttcagtttggtctggcgacgatgtgtatcggtctgggtcagggtattgcgacggtgtttgagcgggtgtaaccacttgccggatgcggcgtgaacgccttatccggtctaccgatccggcaccaatgtagGCCTg                                                                                                                                                 >  1:187365‑M1/145‑149 (MQ=255)
    ggaacgcaaagacgttcagtttggtctggcgacgatgtgtatcggtctgggtcagggtattgcgacggtgtttgagcgggtttaaccacttgccggatgcggcgtgaacgccttatccggtctaccgatccggcaccaatgtagGCCTg                                                                                                                                                 <  1:462388‑M1/5‑1 (MQ=255)
      gCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACTGGAGCATGATGCCTGag                                                                                                                                               >  2:507597/1‑148 (MQ=255)
       ccGGATAAGGCGCTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATg                                                                                                                                              <  1:27653/149‑1 (MQ=255)
             aaGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTACTGCGACGc                                                                                                                                        >  1:697738/1‑149 (MQ=255)
             aaGGCGTTTACGCCGCATCAGGTAATTGGTGCATGATTCCGGATGCGGCGCTGTCGCGTCTTAGCGTGCCTACAAATAGTGCATTCCTGAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGc                                                                                                                                        <  1:22029/149‑1 (MQ=17)
              aGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCt                                                                                                                                       <  1:593619/149‑1 (MQ=255)
              aGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGAGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCCGCCACTGGGGGATGATGCCTGATGCGACGcc                                                                                                                                       >  2:312352/1‑148 (MQ=18)
                     ttcgccgcATCCGGAATTGGGTAAATCATGCCCGATGCGCCGCTGTCGCGTCTTATCGTGCCTCCAAATAGTCCGAATCGTAGGCCGGATAAGGTGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGt                                                                                                                                <  2:440794/147‑1 (MQ=11)
                       cggcgtaTCCGGTAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCt                                                                                                                              <  2:145733/143‑1 (MQ=255)
                       cgccgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGGGCATGATGCCTGATGCGACGCTGGCCCGCCt                                                                                                                              >  2:725308/1‑149 (MQ=255)
                       cgccccATCCGGCAATTGGTGCACGATGCCTGATGCGACGCTGTCGCTTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCt                                                                                                                              <  2:478027/149‑1 (MQ=255)
                          cgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGCCGCTGGCGCGTCTTAt                                                                                                                           >  2:407023/1‑149 (MQ=255)
                           gcATCCGGCAACTGGTCAAGGATGCCGGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATc                                                                                                                          <  2:294747/149‑1 (MQ=14)
                            cATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCa                                                                                                                         <  1:537740/149‑1 (MQ=255)
                              tCCGGCAATTGGTGCATGATGCCGGATGCGCCGCTGGCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAgg                                                                                                                       <  2:602079/149‑1 (MQ=255)
                                 ggCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGCCGCTGGCGAGTCTTATCAGGCCt                                                                                                                    >  1:418818/1‑149 (MQ=255)
                                      ttGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAtt                                                                                                               >  1:547129/1‑149 (MQ=255)
                                       aggTGCATGATGCCTGATGCGACGCAGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGACGCGACGCTGGCGCCACTTATCAGGCCTACATTg                                                                                                              <  1:552620/148‑1 (MQ=17)
                                            cATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTCGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGcc                                                                                                         >  1:363955/1‑149 (MQ=255)
                                            cATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGcc                                                                                                         >  1:11953/1‑149 (MQ=255)
                                            cATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGcc                                                                                                         <  2:493959/149‑1 (MQ=255)
                                             ggtttgCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATAGGGGccc                                                                                                        >  2:552620/5‑148 (MQ=11)
                                             atgatgCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCg                                                                                                        <  2:252054/149‑1 (MQ=255)
                                              tgatgaCTGAGGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCgg                                                                                                       <  2:193833/149‑1 (MQ=255)
                                               gatgCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGa                                                                                                      <  1:569988/149‑1 (MQ=255)
                                                atgCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGAt                                                                                                     <  2:200288/149‑1 (MQ=255)
                                                atgCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGACCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACCTTGGTGCCGGAt                                                                                                     >  1:539533/1‑149 (MQ=255)
                                                   ccTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCgg                                                                                                  >  1:295360/1‑149 (MQ=255)
                                                    cggATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGt                                                                                                 <  1:256852/147‑1 (MQ=255)
                                                    cTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGt                                                                                                 <  1:453476/149‑1 (MQ=255)
                                                     tGATGCGACGCTGTCGCGTCTTATCGTGCATACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTa                                                                                                <  1:176757/149‑1 (MQ=255)
                                                       aTGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGa                                                                                              <  1:269161/149‑1 (MQ=255)
                                                        tGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGAc                                                                                             <  1:511544/149‑1 (MQ=255)
                                                        tGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGAc                                                                                             <  1:396768/149‑1 (MQ=255)
                                                        tGCGACGCTGTCGCGTCTTAGCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGAc                                                                                             <  2:249490/149‑1 (MQ=255)
                                                         gCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGAcc                                                                                            <  1:326375/149‑1 (MQ=255)
                                                          cGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCg                                                                                           >  2:579364/1‑149 (MQ=255)
                                                          cGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCg                                                                                           >  1:369188/1‑149 (MQ=255)
                                                              gcgggcgcgGCGTAGCGTGCCTACAAAGGGGCGGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATa                                                                                       <  2:12067/144‑1 (MQ=18)
                                                               cTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTGCATTGGTGCCGGATCGGTAGACGCGATaa                                                                                      >  1:384308/1‑149 (MQ=255)
                                                               cTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATaa                                                                                      <  2:456808/149‑1 (MQ=255)
                                                               cTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATaa                                                                                      >  1:254352/1‑149 (MQ=255)
                                                               cTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATaa                                                                                      <  2:456643/149‑1 (MQ=255)
                                                               cTGTCGCGTATTATCGTGCATACAAAGAGTCCGAACCGTAGGCCGGATGAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTATTGCAACTTCTACATTGGTGCCGGATCGGTAGACCGGATaa                                                                                      <  1:366325/149‑1 (MQ=17)
                                                                    gcgTCTTATCGTTCCTACAAATAGTCCTAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGTGGTGCATGATGCCTGATCCGACGCCGGCGCGTCTTATCAGGCCTACCTTGGTGCCGGATCGGTAGACCCGATAGGGCGt                                                                                 >  2:1150/1‑149 (MQ=17)
                                                                    gcgTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGTGTTTACGACGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCTGGATCGGTAGACCGGATAAGGCGt                                                                                 <  1:556230/149‑1 (MQ=255)
                                                                    gcgTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCGATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGt                                                                                 >  2:658834/1‑149 (MQ=255)
                                                                    gcgTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGt                                                                                 >  2:694863/1‑149 (MQ=255)
                                                                    gcgTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGt                                                                                 <  1:717607/149‑1 (MQ=255)
                                                                     cgTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGtt                                                                                <  1:647492/149‑1 (MQ=255)
                                                                     cgTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGtt                                                                                <  1:647495/149‑1 (MQ=255)
                                                                      gTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCCGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTc                                                                               <  1:462822/149‑1 (MQ=255)
                                                                              gTGCCTACAAATACTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCa                                                                       >  2:523715/1‑149 (MQ=255)
                                                                                gCCTACAAATAGTCCGACCCGTAGTCCTGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATc                                                                     <  1:507597/149‑1 (MQ=255)
                                                                                 ccTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATcc                                                                    <  1:21139/149‑1 (MQ=255)
                                                                                   tACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGGTAAGGCGTTCCCGCCGCATCCgg                                                                  >  2:671852/1‑149 (MQ=255)
                                                                                   tACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCgg                                                                  >  1:350541/1‑149 (MQ=255)
                                                                                            tCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGtt                                                         <  1:613404/149‑1 (MQ=255)
                                                                                              cGACCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGGAGACCGGATAAGGCGTTCACGCCGCACCCGGCAGGTggcaca                                                       >  2:93482/1‑145 (MQ=21)
                                                                                               gAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCCGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTaaa                                                      >  1:688415/1‑149 (MQ=255)
                                                                                                aaCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAAc                                                     <  2:287251/149‑1 (MQ=255)
                                                                                                     tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAATTGGTTAAACCCGCt                                                <  2:276410/149‑1 (MQ=255)
                                                                                                     tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCt                                                <  2:164127/149‑1 (MQ=255)
                                                                                                       ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCgtttc                                              <  2:655418/149‑5 (MQ=255)
                                                                                                         gcgtgaacgccttatccggtctaccgatccggcaccaatgtagGCCTGATAAGACGCGCCCGCGTCGCATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCaaa                                            <  1:112592‑M1/106‑1 (MQ=255)
                                                                                                         ccGGATAAGGGGGTTACGCCGCATCCGGCAATTGGTGCATGATGCCTCATGCGACTCTGGCGCGTCTTATCAGTCCTACATTGGTGCCGGATCGGTAGATCGGATAAGGCGTTCACGTCGGAGCCGGCAAGTGGGTAAACCCGCTCaaa                                            <  1:555586/149‑1 (MQ=25)
                                                                                                         ccGGATAAGGCGTTTACGCCGCATCTGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCaaa                                            <  1:462213/149‑1 (MQ=255)
                                                                                                             aTAAGGCGTTTACGCCGCATCCGGCAAGTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACAcc                                        <  2:304827/149‑1 (MQ=255)
                                                                                                                aGGCGTTTACGCCGCATCCGGCAATTGATGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATCGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCCAGTGGTTAAACCCGCTCAAACACCGTc                                     <  1:524175/149‑1 (MQ=255)
                                                                                                                      ttACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCCACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATa                               <  1:154197/149‑1 (MQ=255)
                                                                                                                        aCGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATAcc                             <  1:223551/149‑1 (MQ=255)
                                                                                                                        aCGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATAcc                             <  1:547096/149‑1 (MQ=255)
                                                                                                                           ccgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTg                          <  1:490475/149‑1 (MQ=255)
                                                                                                                            cgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGa                         <  1:737230/149‑1 (MQ=255)
                                                                                                                            cgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGa                         >  1:578519/1‑149 (MQ=255)
                                                                                                                            cgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGa                         >  2:411848/1‑149 (MQ=255)
                                                                                                                             gcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTGCCCCGCCTAAGGATTTCATTCCTCATCCGGCAGGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGAc                        <  2:86066/149‑1 (MQ=25)
                                                                                                                              cATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGAAAAAAGTTAAACCCCTTCATACGCCTTCTCATTACCCTgtct                       <  2:745640/149‑4 (MQ=21)
                                                                                                                               atgcGGCCATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCCGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCCTCCGGCAAGTGGTTAAACCCGCTCAAACCCCGTCGCAATACCCTGAccc                      <  2:671085/146‑1 (MQ=37)
                                                                                                                                tCCGGCCATTGCGGCTTGAGGCCTGGTGCGCCTCTCGCGCCTCTTATCAGGCCTACCTAGGTGCCGGATCGGACACCCGCTTATATCTTCCCCTCCGCATAAAGCAAATTTTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCa                     <  2:722976/149‑1 (MQ=255)
                                                                                                                                 ccGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAg                    <  1:190618/149‑1 (MQ=255)
                                                                                                                                  cGGCAATTGGTGCATGCTGTCTGATGCGACGCTGGCGCGTCTTATCAGGACTTCATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCCCGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGa                   <  1:143311/149‑1 (MQ=38)
                                                                                                                                  cGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGa                   >  1:309244/1‑149 (MQ=255)
                                                                                                                                  cGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGa                   <  1:725308/149‑1 (MQ=255)
                                                                                                                                  cGGAAATTGGTGCATGATGCCGGGTGCGCCGCTGGCGCGTCTTCTCGGGGGTACATTGGGGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGa                   <  1:143342/149‑1 (MQ=38)
                                                                                                                                   ggCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGAc                  >  1:63065/1‑149 (MQ=255)
                                                                                                                                     cAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCg                >  1:427127/1‑149 (MQ=255)
                                                                                                                                       aTTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCCAGTGGTTAAACCAGCTCAAACACCATCGGAATACGCTGACCCAGACCGAt              >  2:326683/1‑149 (MQ=37)
                                                                                                                                        ttGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATa             <  2:299885/149‑1 (MQ=255)
                                                                                                                                          accaatgtagGCCTGATAAGACGCGCCAGCGTCGCATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATaca           <  2:527262‑M1/139‑1 (MQ=255)
                                                                                                                                            tGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATAcaca         >  2:338765/1‑149 (MQ=255)
                                                                                                                                            tGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTCCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGCTAcaca         >  1:517063/1‑149 (MQ=255)
                                                                                                                                                 gatgCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGATTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACCtcgtc    >  1:359072/1‑149 (MQ=255)
                                                                                                                                                   tgCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGAACGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGc  <  1:173851/149‑1 (MQ=255)
                                                                                                                                                   tgCCTGATGCGACACTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGc  <  2:1351/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGC  >  NC_000913/4027369‑4027664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.