New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 69943155 (0.970)4 (0.070) 4/280 8.4 6.4% noncoding (7/98 nt) RIP61 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP61 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3639230 64 (1.180)noncoding (23/98 nt) RIP261 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP261 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGGCTGCGGTACTGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTA  >  NC_000913/3639085‑3639371
                                                                                                                                                 |                                                                                                                                             
cGGCTGCGGTACTGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATc                                                                                                                                            <  2:816357/149‑1 (MQ=255)
 ggCTGCGGTACTGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATcc                                                                                                                                           >  2:825075/1‑149 (MQ=255)
    tGCGGTACTGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                                                                                        >  1:10111/1‑149 (MQ=255)
    tGCGGTACTGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                                                                                        <  2:486325/149‑1 (MQ=255)
    tGCGGTACTGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCACGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                                                                                        <  1:494019/149‑1 (MQ=255)
    tGCGGTACTGCTTTCCGGCGGGCTGTACTGGCTCTCCTGGCAGTTCCTGTAATCGTACGCACTAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                                                                                        <  1:640850/149‑1 (MQ=255)
      cGGTACTGCTTTCCGGCGGGCTGTACTGGCCCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGACGGCCTTATCCGGCCt                                                                                                                                      >  2:15303/1‑149 (MQ=255)
      cGGTACTGCTTTCCGGCGGGCTGTACTGGCCCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCAGGCCGGATAAGGCGTTCACGCCGCATCCGGcat                                                                                                                                      <  1:712846/149‑3 (MQ=255)
       ggTACTGCTTTCCGTCGGGCTGTACTGGCTCTCCTTACACTTGCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGTGTGAACGTCTTATCCGGCCTa                                                                                                                                     <  1:668492/149‑1 (MQ=38)
            tGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaaa                                                                                                                                <  2:936157/149‑1 (MQ=255)
            tGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaaa                                                                                                                                >  2:768040/1‑149 (MQ=255)
            tGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGACGCGGCGGGGACGCCTTATCCGGCCTACaaaa                                                                                                                                >  1:837085/1‑149 (MQ=255)
             gCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaaaa                                                                                                                               >  1:401236/1‑149 (MQ=255)
              cTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAAc                                                                                                                              <  1:385325/149‑1 (MQ=255)
               tttCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAAcg                                                                                                                             >  1:112890/1‑148 (MQ=255)
                   cggcggGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCa                                                                                                                         >  2:458249/1‑149 (MQ=255)
                           tGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGACTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAAt                                                                                                                 >  1:330175/1‑149 (MQ=255)
                               ctcgCTCTCCCTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGAt                                                                                                             <  2:924407/146‑1 (MQ=255)
                                 ggCCCTCCTTGCAGTTCCTGTAACCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTg                                                                                                           <  1:372048/149‑1 (MQ=255)
                                  gCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGc                                                                                                          >  2:93689/1‑149 (MQ=255)
                                   ctctCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCa                                                                                                         <  1:892597/149‑1 (MQ=255)
                                    tctcCTGGCAACTCCTGTAATCGTACGCACCAAAACGAGCGGGCCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCag                                                                                                        <  2:417922/149‑1 (MQ=25)
                                     ctcCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCaga                                                                                                       >  2:193742/1‑149 (MQ=255)
                                       ccTGGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAgaga                                                                                                     <  2:618747/149‑1 (MQ=255)
                                         ttGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGAtt                                                                                                   <  2:495071/149‑1 (MQ=255)
                                         ttGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCCGTGACGGCGGGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGAtt                                                                                                   >  1:221351/1‑149 (MQ=38)
                                             aGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGt                                                                                               <  2:377049/149‑1 (MQ=255)
                                                  cTGTAATCGTACGCACCATGACGAGCGGGTCAGATGGCCCGCTTCAGATTGTGACATAGAGGTCTTGGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGcc                                                                                          >  1:693304/1‑149 (MQ=25)
                                                   tGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCt                                                                                         >  1:711918/1‑149 (MQ=255)
                                                    gTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTg                                                                                        >  2:636493/1‑149 (MQ=255)
                                                        tCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATaa                                                                                    >  1:335532/1‑149 (MQ=255)
                                                              gCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAg                                                                              <  1:582409/149‑1 (MQ=255)
                                                                 ccAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTCCAGCGATTAAGTAGGCCTGATAAGCGTAgcgc                                                                           >  2:269879/1‑149 (MQ=255)
                                                                  cAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAGGCGTAGCGCa                                                                          >  2:307165/1‑149 (MQ=255)
                                                                  cAAAACGAGCGGGTCAGCTGGCCCGCTTCAGAATGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGGTTGCAGAGATTATGTAGGCCTGATAAGCGTAGCCCa                                                                          >  2:181276/1‑149 (MQ=255)
                                                                  cAAAACGAGCGGGCCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGTAAATTCAATAGATTGCAGAGATTATGTAGACCTGATAAGCGTAGCGCa                                                                          >  2:575790/1‑149 (MQ=255)
                                                                   aaaaCGAGCGGGTCAGCTGGCCCGCTTCCGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATGATGTAGGCCTGATCAGCGGAggacat                                                                         >  1:854106/1‑144 (MQ=21)
                                                                         aGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                   >  1:244407/1‑149 (MQ=255)
                                                                          gCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                                  <  2:300265/149‑1 (MQ=255)
                                                                            gggTCAGCGGGCCCGCTTCAGATTGTGACAGAGTGCGCTTTGTTCATGCCGAATGCGGCGTGAACGCCTTATCCGGCCAAAAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt                                                                <  1:647646/149‑1 (MQ=21)
                                                                              gTCGGCTGGCCCGCTTGAGGTTGTGTCATAGTTCTCTTTGTTCATGCCGGAGGTGGCGTGCACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGCTTACGTAGGCCCGATAACCGTAGCGCATCCGGCAAtttt                                                              <  2:826182/149‑1 (MQ=18)
                                                                                cAGCTGGCCCGCTTGAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGc                                                            <  1:719403/149‑1 (MQ=255)
                                                                                   cTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGCTGCGGCGTGAACGCCTTATCCGACCTACAAAAACATGCAAATGCAATAGATTGCAGAGAGAATCTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTggggt                                                         >  2:356167/1‑145 (MQ=18)
                                                                                   cTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGGTTGCAGAGATTATGTAGGCCTGATAAGCCGAGCGCATGAGGCAATTTTGCGtt                                                         >  1:686836/1‑149 (MQ=255)
                                                                                    tGGCCCGCTGCAGATTGTGACATAGGGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGttt                                                        <  2:2669/149‑1 (MQ=255)
                                                                                            ttCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAg                                                >  1:457354/1‑149 (MQ=255)
                                                                                              cAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGtc                                              >  1:414980/1‑149 (MQ=255)
                                                                                                    gtgACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGTCTTTGTAATCAGTCTCGAGc                                        >  2:238137/1‑149 (MQ=255)
                                                                                                    gtgACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGc                                        <  2:241346/149‑1 (MQ=255)
                                                                                                    gtgACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGc                                        <  2:120563/149‑1 (MQ=255)
                                                                                                     tgACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCATGCGAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGGGCCTCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCg                                       >  2:437963/1‑149 (MQ=255)
                                                                                                      gACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCgg                                      <  1:805072/149‑1 (MQ=255)
                                                                                                          tAGCGCGCTTTGCTCCTGCGGGATGCCGCGTGAACGCCTTATCCGGCCTACAAAAATATGCAAACTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCa                                  <  1:26158/149‑1 (MQ=18)
                                                                                                           aGTGCGCTTTGTTCATGCCGGATGCGGCGCGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCCGAGAGTATGTAGGCCTCATAAGCGTAGCGCCACAGGCCATTTGGCGCTTGCCATCAGTCGCGAGCgggcccg                                 >  2:713624/1‑145 (MQ=17)
                                                                                                               cgcTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAACCAGTCTCAGGAGGGTCAGTTTa                             >  2:20708/1‑149 (MQ=18)
                                                                                                                  tttGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTg                          <  2:330175/149‑1 (MQ=255)
                                                                                                                  tttGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTg                          <  2:208794/149‑1 (MQ=255)
                                                                                                                   ttGTTCATGCCGGATGCGGCGTGAACGCCGTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTgg                         >  1:665586/1‑149 (MQ=255)
                                                                                                                    tGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGc                        <  2:837085/149‑1 (MQ=255)
                                                                                                                      ttCATGCCGGATGCGGCGTGAACGTCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGccc                      >  1:703714/1‑149 (MQ=255)
                                                                                                                       tCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTAAGTAGACGTGATAAACGAAGCGCATCAGGCAATTTTGCGTTGTGCATCAGTCTCGACCGGGTCAGTTTACTCGCCCg                     >  2:338529/1‑149 (MQ=18)
                                                                                                                       tCATGCCGGAGGCGGCGTGAACGCCTTGTCCGGCCTACAAAAACATGCAAATTCAATAGAGTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTCTGTAATCAGCCTCGAGCGGGTCAGTTTACTGGCCCg                     <  2:229268/149‑1 (MQ=21)
                                                                                                                         acgCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTTATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACCGGCCCACt                   <  2:352738/147‑1 (MQ=255)
                                                                                                                         aTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTATACTGGCCCGCt                   >  2:267624/1‑149 (MQ=255)
                                                                                                                         aTGCCGGAGGCGGCGTGACCGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGACTGCGGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCt                   <  1:638885/149‑1 (MQ=255)
                                                                                                                          tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCtt                  >  2:427150/1‑149 (MQ=255)
                                                                                                                             cGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCACAGATTAAGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTACTCAGTCTCAAGCGGGTCGGTTTACTGGCCCGCtttct               >  2:191075/1‑147 (MQ=21)
                                                                                                                               gATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCttttttt             <  1:636493/149‑1 (MQ=255)
                                                                                                                                 tGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTAt           <  2:69928/149‑1 (MQ=255)
                                                                                                                                       gTGACCGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGTGTCAGTTTACTGGCCCGCTTTTTTTATGCGtta     <  1:691196/149‑1 (MQ=255)
                                                                                                                                          aaCGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGttatta  >  1:278555/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                             
CGGCTGCGGTACTGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAATCGTACGCACCAAAACGAGCGGGTCAGCTGGCCCGCTTCAGATTGTGACATAGTGCGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTA  >  NC_000913/3639085‑3639371

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.