New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4180954 =	35 (0.720)	7 (0.160) +GAAATCAGGCTGAT	7/266	4.7	18.1%	intergenic (+30/‑290)	rplL/rpoB	50S ribosomal subunit protein L7/L12/RNA polymerase, beta subunit
	?	NC_000913	= 4180989	35 (0.720)					intergenic (+65/‑255)	rplL/rpoB	50S ribosomal subunit protein L7/L12/RNA polymerase, beta subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGGACGTCCTGTCGCAGTATATTAAGTCGTCGATAGAAACAAGCATTGAAAGGCACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4181095‑4180954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGATTTCTCAGGCTGCAACCGGAAGGGTTGGCTTATTTAACTTCAACTTCAGCGCCAGCTTCTTCCAGAGCTTTTTTCAGTGCTTCTGCGTCGTCTTTGCTCACGCCTTCTT  <  NC_000913/4180989‑4180845                                                                                                                                               ||||||||||||||                                                                                                                                                  CGGACGTCCTGTCGCAGTATATTAAGTCGTCGATAGAAACAAGCATTGAAAGGCACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGAGAAATCA                                                                                                                                                          <  2:226744/149‑1         CTGTCGCAGTATATTAAGTCGTCGATAGAAACAAGCATTGAAAGGCACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGAGAAATCAGGCTGcaa                                                                                                                                                  >  1:524162/1‑146                                    GAAACAAGCATTGAAAGGCACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTAGAAAGTCACCAGCCAT                                                                                                                       >  1:590556/1‑149                                                                 TCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGAGAAATCAGGCTGATGGCTGGTGGCTAAACAGTCACCAGCCATCCGCCAGAGTTCTCAGGCTGCAACCGGAA                                                                                          >  1:783114/1‑149                                                                     ACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTAAAAAGTCACCAGCCATCATTCTGATTTCTCTGGCTGCAGCGGGTAGGGT                                                                                      >  1:763332/1‑149                                                                                             TTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGAGAAATCAGGCTGATGGCTGGGGACTAAAAAGTCACCAGCCATCAGCCTGATGTCTCAGGCTGCAGCCGGCAGGGTTGGCTTATTGAACTTCAACTTCAG                                                              >  1:783737/1‑149                                                                                                   CGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTAAAAAGTCACCAGCCATCCGCCTGATCTCTCAGGCTGCAACCGGAAGGGTTGGCTTACTTAACTTCAACTTCAGCGCCAG                                                        >  1:691104/1‑149                                                                                                                     TAAAAAGTCACCAGCCATCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGATTTCTCAGGCTGCAACCGGAAGGGTTGGCTTATTTAACTTCAACTTCAGCGCCAGCTTCTTCCAGAGCTTTTT                                      >  1:296860/1‑149                                                                                                                               CCAGCCATCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGATTTCTCAGGCTGCAACCGGAAGGGTTGGCTTATTTAACTTCAACTTCAGCGCCAGCTTCTTCCAGAGCTTTTTTCAGTGCTTC                            <  2:296860/149‑1                                                                                                                                                         TGATGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGATTTCTCAGGCTGCAACCGGAAGGGTTGGCTTATTTAACTTCAACTTCAGCGCCAGCTTCTTCCAGAGCTTTTTTCAGTGCTTCTGCGTCGTCCTTGCCCCCGCCTTCTT  >  2:765779/1‑149                                                                                                                                               ||||||||||||||                                                                                                                                                  CGGACGTCCTGTCGCAGTATATTAAGTCGTCGATAGAAACAAGCATTGAAAGGCACAGCAGTAGTCAAACAGTGTGAAACGCTACTGGCGCCTTACAGCGCAAAAAGGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4181095‑4180954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCTGGTGACTAAAAAGTCACCAGCCATCAGCCTGATTTCTCAGGCTGCAACCGGAAGGGTTGGCTTATTTAACTTCAACTTCAGCGCCAGCTTCTTCCAGAGCTTTTTTCAGTGCTTCTGCGTCGTCTTTGCTCACGCCTTCTT  <  NC_000913/4180989‑4180845

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.