| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4180954 = | 35 (0.720) | 7 (0.160) +GAAATCAGGCTGAT |
7/266 | 4.7 | 18.1% | intergenic (+30/‑290) | rplL/rpoB | 50S ribosomal subunit protein L7/L12/RNA polymerase, beta subunit |
| ? | NC_000913 | = 4180989 | 35 (0.720) | intergenic (+65/‑255) | rplL/rpoB | 50S ribosomal subunit protein L7/L12/RNA polymerase, beta subunit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAAGAAGGCGTGAGCAAAGACGACGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGA > NC_000913/4180844‑4181131 | aaaGAAGGCGTGAGCAAAGACGACGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCttt < 2:284264/149‑1 (MQ=255) aagaagGCGGGGGCAAGGACGACGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGccatca < 2:765779/149‑5 (MQ=255) gAGCAAAGACGACGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCAAACCCGTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCGGGTGTCTTTTTAGTCACCCCCCCTTTTGCGCTgaga > 2:350906/1‑146 (MQ=255) gCAAAGACGACGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCTCTGTaatg > 1:2548/1‑147 (MQ=255) acgacgacGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGgcgc < 2:407573/147‑1 (MQ=255) aaGACGACGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGgcgc < 2:407570/149‑1 (MQ=255) gacggcGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCa < 2:593677/149‑1 (MQ=255) cACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTAGCGCTGTAAGGCGCCCGTAGCGTTTcgca > 2:713967/1‑149 (MQ=255) aaaaaGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGATTTCTCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGttt < 2:801926/149‑1 (MQ=255) aaaGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGa < 1:653092/149‑1 (MQ=255) ctctGGAAGGAGCTGGCGCTGAAGTCGAAGTTAAATAAGCCACCCCTTCCGGTTGCAGCCTGATTTCTCAGGCTGATGGCGGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCTCCAGTAGCCTTGCACACTGTTTGactac < 2:97291/149‑1 (MQ=255) gaagCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGTGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTTTTTGTCTActgcctttc > 1:563733/1‑144 (MQ=255) gaagCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGc < 1:696574/149‑1 (MQ=255) agCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGATTTCTCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCt < 2:513580/149‑1 (MQ=255) tGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGGGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTc > 2:468083/1‑149 (MQ=255) tgaagttgaagtTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCt < 2:116867/149‑1 (MQ=255) ttgaagttAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCTCTGTACGGCGCCAGTAGCGTTTCACCCTCTTTGACCACCGCCGTGTCGTCCAATCCttagtc > 1:308741/1‑145 (MQ=255) tgaagttAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTc < 1:169805/149‑1 (MQ=255) ttAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACCCTTTTTGACTCCTGCCGTGCCTTTCAATGCTTGTTTCttggt > 2:590556/1‑145 (MQ=255) cAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAat < 2:72797/149‑1 (MQ=255) ccatcAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACa > 1:695781/5‑149 (MQ=255) atcAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATGTACTGCGACAgg > 1:582484/3‑149 (MQ=255) atcAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATCTACTGCGACAgg > 1:484799/3‑149 (MQ=255) tgatttctCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCg > 2:226744/8‑149 (MQ=255) aTCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCtgt < 2:484799/149‑1 (MQ=255) tCAGGCTGATGGCTGGTGACTTTTTAGTTGTTGGCCTTTTTGCGCTGTAAGGCGGTAGTCGCGTTTCACAGTGTTTGACTACTGCTGTGCGTTTCAATGCTTGTTTCTATGGACGACTTAATGTACTGCGACCGGAGGTCGGttttttg > 2:17848/1‑144 (MQ=255) aGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTTTTTTTTTTTGCGCCAGTAGCGTTTCACACTGTTTGAGTACTGCTGTGCCTTTCAATGCTTGTTTATCTTGACGACTTCATATACTGCGAGAGGCCGTCCGTTCTgtgtg > 2:523846/1‑148 (MQ=255) aGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGGCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGAGGTCCGTTCTgtgtc > 2:675859/1‑148 (MQ=255) tGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAAtac > 2:275355/1‑147 (MQ=255) tGGTGACTTTTTAGTCACCAGCCTTTTTGAGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTCAACTGCTCCTAGGACTTTCAATGCTTGTTTCTCTCGACGACTTACTATACTGCGAGAGGAGGTCCGTTCGAGGTAAATCGACATGa > 2:503190/1‑149 (MQ=255) tttAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTa > 2:811073/1‑149 (MQ=255) tttAGTCACCAGCCTTTTTGCGCTGTAAAGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCAGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAAGACGTCCGTTCTGTGTAAATCGAAATGAAATGGTTTa > 1:533373/1‑149 (MQ=255) tCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGGTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGt < 1:272826/149‑1 (MQ=255) aCCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGa < 2:695781/149‑1 (MQ=255) aCCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACAGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGCAATGGTTTAAGCGTGa > 1:467063/1‑149 (MQ=255) aCCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGATTAACTACTGCCGTGCCGTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAAAGGTTTAAGCGTGa > 2:539145/1‑149 (MQ=255) | AAAGAAGGCGTGAGCAAAGACGACGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGGACGTCCGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGA > NC_000913/4180844‑4181131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |