Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,185,992 Δ18 bp coding (644‑661/4224 nt) rpoC → RNA polymerase, beta prime subunit

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4185992 4186009 18 62 [0] [0] 62 rpoC RNA polymerase, beta prime subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 41859910 (0.000)56 (0.910) 48/274 0.3 100% coding (643/4224 nt) rpoC RNA polymerase, beta prime subunit
?NC_000913 4186010 = 0 (0.000)coding (662/4224 nt) rpoC RNA polymerase, beta prime subunit

TTCGGTGACGAATTCGACGCGAAGATGGGGGCGGAAGCAATCCAGGCTCTGCTGAAGAGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTAAAAAGCTGACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATC  >  NC_000913/4185862‑4186156
                                                                                                                                                    |                                                                                                                                                  
ctggacgcgctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaacccactccgaaaccaagcgtat                                                                                                                                                    >  2:111113‑M2/149‑149 (MQ=255)
ctggacgcgctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtat                                                                                                                                                    >  2:110924‑M2/149‑149 (MQ=255)
        gctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAActgc                                                                                                                                            >  1:154507‑M2/141‑149 (MQ=255)
         ctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggaggaagagtgcgaacagctgcgtgaagagctgaacgaaacctactccgaaaccaagcgtaTCAAActgct                                                                                                                                           <  1:659170‑M2/10‑1 (MQ=255)
         ctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAActgct                                                                                                                                           <  1:260603‑M2/10‑1 (MQ=255)
             aagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGaa                                                                                                                                       <  2:163729‑M2/14‑1 (MQ=255)
                 gttcggtgacgaattcgacgcgaagatgggggcggaagcaatccgggctctacggaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGcgt                                                                                                                                   <  1:478400‑M2/18‑1 (MQ=255)
                  ttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACAGCTGGAAGcgtt                                                                                                                                  >  2:88430‑M2/131‑149 (MQ=255)
                     ggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGcgttcgt                                                                                                                               >  1:691659‑M2/128‑149 (MQ=255)
                     ggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGcgttcgt                                                                                                                               >  1:691553‑M2/128‑149 (MQ=255)
                        gacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCa                                                                                                                            >  1:982247‑M2/125‑149 (MQ=255)
                        gacgaattcgacgcgaagagggggtcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCa                                                                                                                            <  2:115131‑M2/25‑1 (MQ=255)
                           gaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaCCAAACTGCTGGAAGCGCACGTTCAGTc                                                                                                                         >  2:759084‑M2/122‑149 (MQ=255)
                            aattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCt                                                                                                                        >  1:27527‑M2/121‑149 (MQ=255)
                               tcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGt                                                                                                                     >  1:860264‑M2/118‑149 (MQ=255)
                                    gcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCCAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACaa                                                                                                                >  2:1054560‑M2/113‑149 (MQ=255)
                                      gaagatgggggcggaagcaatccaggctctgctgaagagcatggataaggtgcaagattgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGCAAcaaaa                                                                                                              >  2:822773‑M2/111‑148 (MQ=255)
                                          atgggggcgggagcaatccaggctctggtgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCaga                                                                                                          <  1:64538‑M2/43‑1 (MQ=255)
                                           tgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCagag                                                                                                         <  2:365060‑M2/44‑1 (MQ=255)
                                             ggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTg                                                                                                       >  2:674878‑M2/104‑149 (MQ=255)
                                                  ggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGCAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGGGgatga                                                                                                  >  2:850950‑M2/99‑149 (MQ=255)
                                                      gcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctacgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTGTGGTAACAAACCAGAGTGGATGATCCt                                                                                              >  1:622637‑M2/95‑149 (MQ=255)
                                                         atccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagacctgaaagaaaccaactccgaaaccaagcgtaTCAAACAGGTGGAAGCGTACGTTCAGTCTGGTAACAAACCAGAGTGTAGGATCCTGAc                                                                                           >  1:908434‑M2/92‑149 (MQ=255)
                                                            caggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGGGGATGATCCTGACCGt                                                                                        >  1:438469‑M2/89‑149 (MQ=255)
                                                            caggctctgctgaagagcatggatctggagcaacggccctaacagctgcgtgaagagctgaacgaacccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATGCTGACCGt                                                                                        >  2:775605‑M2/89‑149 (MQ=255)
                                                                ctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACAAGAGTGGATGATCCTGACCGTCCTg                                                                                    >  1:1089468‑M2/85‑149 (MQ=255)
                                                                   tgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCg                                                                                 >  1:822656‑M2/82‑149 (MQ=255)
                                                                           agcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGATCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTgcc                                                                         >  1:486948‑M2/74‑149 (MQ=255)
                                                                             caggggtctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCGGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTgccgc                                                                       <  1:310550‑M2/78‑1 (MQ=255)
                                                                                  atctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGAt                                                                  <  2:154507‑M2/83‑1 (MQ=255)
                                                                                   tctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATc                                                                 <  1:676983‑M2/84‑1 (MQ=255)
                                                                                    ctggagcaagagtgcgaacagcggcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCt                                                                <  2:509904‑M2/85‑1 (MQ=255)
                                                                                            agagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCCGATCTGCGTCCGc                                                        >  2:513660‑M2/57‑149 (MQ=255)
                                                                                             gagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGGGGATGATCCTGACCGTTCTGCCGGTCCTGCCGCCAGATCTGCGTCCGCt                                                       >  2:354286‑M2/56‑149 (MQ=255)
                                                                                              agtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTg                                                      <  2:446245‑M2/95‑1 (MQ=255)
                                                                                                tgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGt                                                    >  2:535017‑M2/53‑149 (MQ=255)
                                                                                                     acagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaACAAACTGCTGGAAGCGTTCGTTCAGGCTGGTAACAAACAGGAGTGGATGATCCTGACCGTTCTGCCGGTGCTGCCGACAGATCTGCGTCCGATGGTTCGGc                                               >  1:293299‑M2/48‑149 (MQ=255)
                                                                                                      cagctgcgtgaagggctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCt                                              <  1:361473‑M2/103‑1 (MQ=255)
                                                                                                       agctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTg                                             >  2:1061961‑M2/46‑149 (MQ=255)
                                                                                                        gctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTgg                                            <  1:494358‑M2/105‑1 (MQ=255)
                                                                                                            cgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGAtgg                                        >  1:126000‑M2/41‑149 (MQ=255)
                                                                                                                aagagctgaacgaaaccaaccccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATggtggt                                    <  2:357439‑M2/113‑1 (MQ=255)
                                                                                                                 agagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTc                                   >  2:2201‑M2/36‑149 (MQ=255)
                                                                                                                        aacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCCGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTcgc                            >  1:960973‑M2/29‑149 (MQ=255)
                                                                                                                        aacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTcgc                            <  2:407582‑M2/121‑1 (MQ=255)
                                                                                                                        aacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGCTCGTTTcgc                            >  2:430251‑M2/29‑149 (MQ=255)
                                                                                                                              accaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGGGGATGATCCTGACCGTTCTGCCGGGACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGCGGTCGTTTCGCGACTTc                      >  2:115178‑M2/23‑149 (MQ=255)
                                                                                                                              accaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCACAGTGGATGATCCTGACAGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTTGTTTCGCGACGTc                      >  1:909266‑M2/23‑149 (MQ=255)
                                                                                                                               ccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGCTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCt                     >  1:774484‑M2/22‑149 (MQ=255)
                                                                                                                                caactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGGAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTg                    >  2:181211‑M2/21‑149 (MQ=255)
                                                                                                                                  actccgaaaccaagcgcaTAAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGCGTGGATGATCCTGACCGTTCGGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGAc                  <  1:288353‑M2/131‑1 (MQ=255)
                                                                                                                                    tccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCt                >  2:486668‑M2/17‑149 (MQ=255)
                                                                                                                                    tccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCt                >  1:161949‑M2/17‑149 (MQ=255)
                                                                                                                                     ccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTg               >  2:819132‑M2/16‑149 (MQ=255)
                                                                                                                                        aaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCTAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAAc            <  2:691659‑M2/137‑1 (MQ=255)
                                                                                                                                        aaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAAc            <  2:691553‑M2/137‑1 (MQ=255)
                                                                                                                                            caagcgtaGCAACCTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGATGGGATGAGCCTGACCGTTCTGCCGGTACTGCCGCCAGAGCTTCGTCCGCTGGTTCCGCTGGCTGGTGGTCGTTTCGCGACTTCTGACCTGAACGATc        <  2:656569‑M2/141‑1 (MQ=255)
                                                                                                                                              agcgtaTCAAACCGCCGGAAGCGTTCGTCCAGTCTGGTAACAAACCAGAGTGGATGATCCCGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTg      <  2:581606‑M2/143‑1 (MQ=255)
                                                                                                                                                 gtttCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATTATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTAt   <  2:504103/146‑1 (MQ=255)
                                                                                                                                                  taTCAAACTGCTGGCAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACGGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATc  <  1:238583‑M2/147‑1 (MQ=255)
                                                                                                                                                  taTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATc  <  2:822656‑M2/147‑1 (MQ=255)
                                                                                                                                                  taTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATc  <  1:454551‑M2/147‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
TTCGGTGACGAATTCGACGCGAAGATGGGGGCGGAAGCAATCCAGGCTCTGCTGAAGAGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTAAAAAGCTGACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATC  >  NC_000913/4185862‑4186156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.