New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3210131 =76 (0.790)3 (0.030) 3/244 NT 3.8% coding (413/1014 nt) tsaD tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein
?NC_000913 3210172 = 81 (0.900)coding (372/1014 nt) tsaD tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein
Rejected: Frequency below/above cutoff threshold.

CGCCATTTTCGACAGTAACGGCCCGCCAGGATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCA  >  NC_000913/3209983‑3210278
                                                                                                                                                    |                                                                                                                                                   
tgtggcctataccgcaggccctggattagtcggcgcgctactggttggcgcgaccgtggggcgttctctggcgtttgcctgggacgttccggcgatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacc                                                                                                                                                     <  3:187320‑M1/1‑1 (MQ=255)
tgtggcctataccgcaggccctggattagtcggcgcgctactggttggcgcgaccgtggggcgttctctggcgtttgcctgggacgttccggcgatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacc                                                                                                                                                     <  4:610708‑M1/1‑1 (MQ=255)
cgccATTTTCGACAGTAACGGCCCGCCAGGATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGAc                                                                                                                                                     >  3:403446/1‑149 (MQ=255)
cgccATTTTCGACAGTAACGGCCCGCCAGGATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGAc                                                                                                                                                     >  3:60578/1‑149 (MQ=255)
 gtggcctataccgcaggccctggattagtcggcgcgctacttgttggcgcgaccgtggggcgttctctggcgtttgccttggacgttccggcgatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataaccc                                                                                                                                                    >  2:79275‑M1/148‑149 (MQ=255)
  tggcctataccgcaggccctggattagtcggcgcgctactggttggcgcgaccgtggggcgttctctggcgtttgcctgggacgttccggcgatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacccg                                                                                                                                                   <  1:320974‑M1/3‑1 (MQ=255)
     cctataccgcaggccctggattagtcggcgcgctactggttggcgcgaccgtggggcgttctctggcgtttgcctgggacgttccggcgatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacccgccg                                                                                                                                                <  1:749758‑M1/6‑1 (MQ=255)
      ctataccgcaggccctggattagtcggcgcgctactggttggcgcgaccgtggggcgttctctggcgtttgcctgggacgttccggcgatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacCCGCCgg                                                                                                                                               <  2:27034‑M1/7‑1 (MQ=255)
       tataccgcaggccctggattagtcggcgcgctactggttggcgcgaccgtggggcgttctctggcgtttgcctgggacgttccggcgatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacCCGCCGGa                                                                                                                                              <  3:701053‑M1/8‑1 (MQ=255)
       tataccgcaggccctggattagtcggcgcgctactggttggcgcgaccgtggggcgttctctggcgtttgcctgggacgttccggcgatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacCCGCCGGa                                                                                                                                              <  4:532761‑M1/8‑1 (MQ=255)
       tataccgcaggccctggattagtcggcgcgctactggttggcgcgaccgtggggcgttctctggcgtttgcctgggacgttccggcgatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacCCGCCGGa                                                                                                                                              <  1:426835‑M1/8‑1 (MQ=255)
        ataccgcaggccctggattagtcggcgcgctactggttggcgcgaccgtggggcgttctctggcgtttgcctgggacgttccggcgatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacCCGCCGGaa                                                                                                                                             >  2:90496‑M1/141‑149 (MQ=255)
          gACAGTAACGGCCCGCCAGGATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAAc                                                                                                                                           >  2:453275/1‑149 (MQ=255)
             aGTAACGGCCCGCCAGGATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAag                                                                                                                                        <  1:37683/149‑1 (MQ=255)
              gTAACGGCCCGCCAGGATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAagc                                                                                                                                       <  1:232390/149‑1 (MQ=255)
                aaCGGCCCGCCAGGATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAagcag                                                                                                                                     >  2:122263/1‑149 (MQ=255)
                        gCCAGGATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGcaacaa                                                                                                                             <  1:55986/149‑1 (MQ=255)
                        gCCAGGATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGcaacaa                                                                                                                             >  3:203188/1‑149 (MQ=255)
                           aGGATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACg                                                                                                                          >  3:379312/1‑149 (MQ=255)
                            ggATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACgg                                                                                                                         >  4:205299/1‑149 (MQ=255)
                             gATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGa                                                                                                                        >  3:82685/1‑149 (MQ=255)
                                aaTCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCTAGCAGCTCGTACTGACCATTGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGTAAt                                                                                                                     <  4:549424/149‑1 (MQ=255)
                                     aGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCcgg                                                                                                                >  4:131676/1‑149 (MQ=255)
                                     aGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCcgg                                                                                                                >  2:452071/1‑149 (MQ=255)
                                         ccAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCggg                                                                                                            >  1:281960/1‑149 (MQ=255)
                                               gcgcgaccgtggggcgttctctggcgtttgcctgggacgttccggcgatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacCCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCt                                                                                                      >  1:772122‑M1/102‑149 (MQ=255)
                                               gcTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCt                                                                                                      <  2:111620/149‑1 (MQ=255)
                                                  tCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTcc                                                                                                   <  4:82685/149‑1 (MQ=255)
                                                   cgcgGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCa                                                                                                  <  3:581938/149‑1 (MQ=255)
                                                    gcgGTTTTATCAAACGCTTCCCCGGCGGCATCATCGCTAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTCACTTCGTATGACCGACGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCac                                                                                                 >  2:629902/1‑148 (MQ=255)
                                                        ttttATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATc                                                                                             >  2:749758/1‑149 (MQ=255)
                                                            aTCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGgcg                                                                                         <  4:387938/149‑1 (MQ=255)
                                                              cAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGAAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCt                                                                                       >  2:157896/1‑149 (MQ=255)
                                                                   gCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAg                                                                                  >  2:200506/1‑149 (MQ=255)
                                                                     ttCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATGCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGAt                                                                                <  1:374618/149‑1 (MQ=255)
                                                                      tCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATg                                                                               <  4:203188/149‑1 (MQ=255)
                                                                      tCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATg                                                                               <  3:32286/149‑1 (MQ=255)
                                                                       ccccGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGc                                                                              <  1:116521/149‑1 (MQ=255)
                                                                         ccGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCGCGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGc                                                                              >  3:605423/1‑147 (MQ=255)
                                                                         ccGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGccc                                                                            >  3:557596/1‑149 (MQ=255)
                                                                         ccGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGccc                                                                            >  3:768027/1‑149 (MQ=255)
                                                                         ccGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGccc                                                                            <  3:862383/149‑1 (MQ=255)
                                                                         ccGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGc                                                                              <  4:605423/147‑1 (MQ=255)
                                                                         ccGGCGGCATCATCCATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGccc                                                                            >  4:443445/1‑149 (MQ=255)
                                                                                catcatCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCata                                                                     <  1:479480/149‑1 (MQ=255)
                                                                                  tcatcGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATg                                                                   <  1:122263/149‑1 (MQ=255)
                                                                                  gcatcGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATg                                                                   >  2:744701/2‑149 (MQ=255)
                                                                                    atcGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGgt                                                                 >  4:701053/1‑149 (MQ=255)
                                                                                     tcGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGgtg                                                                >  3:854398/1‑149 (MQ=255)
                                                                                         tAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACa                                                            <  1:509197/149‑1 (MQ=255)
                                                                                          aGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAg                                                           <  3:178020/149‑1 (MQ=255)
                                                                                            aCTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAggg                                                         <  1:854510/149‑1 (MQ=255)
                                                                                             gatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacCCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCcggc                                                                                                               <  1:199201‑M1/39‑1 (MQ=255)
                                                                                             gatccctgtacaccatatggaagggcatctgttagcgccgatgctggaagataacCCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCcggc                                                                                                               >  2:199201‑M1/56‑94 (MQ=255)
                                                                                              tCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGAt                                                       >  2:656240/1‑149 (MQ=255)
                                                                                              tCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATGAACTGCGTATGACCGCCGGAAACAAGCAGCCCAACAATCGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCATTCCATATGGTGTACAGGGAt                                                       <  1:629902/149‑1 (MQ=255)
                                                                                               cGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATc                                                      <  1:157896/149‑1 (MQ=255)
                                                                                                 ccGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGc                                                    >  3:853988/1‑149 (MQ=255)
                                                                                                 ccGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGc                                                    <  3:659667/149‑1 (MQ=255)
                                                                                                   gAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCg                                                  <  1:153831/149‑1 (MQ=255)
                                                                                                         cTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGt                                            >  1:576127/1‑149 (MQ=255)
                                                                                                         cTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGt                                            >  2:388230/1‑149 (MQ=255)
                                                                                                          tCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTc                                           <  3:350964/149‑1 (MQ=255)
                                                                                                           cGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTcc                                          <  2:576127/149‑1 (MQ=255)
                                                                                                             tACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCa                                        <  2:54032/149‑1 (MQ=255)
                                                                                                             tACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCa                                        >  1:168278/1‑149 (MQ=255)
                                                                                                              aCTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAg                                       >  1:344263/1‑149 (MQ=255)
                                                                                                                tGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGc                                     >  3:588692/1‑149 (MQ=255)
                                                                                                                  aCCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATc                                                      <  1:298500/130‑1 (MQ=255)
                                                                                                                  aCCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATc                                                      >  2:298500/1‑130 (MQ=255)
                                                                                                                  aCCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCaa                                   >  4:538545/1‑149 (MQ=255)
                                                                                                                  aCCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCaa                                   >  2:236481/1‑149 (MQ=255)
                                                                                                                    cAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATc                                                      >  4:179068/1‑128 (MQ=255)
                                                                                                                    cAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATc                                                      <  3:179068/128‑1 (MQ=255)
                                                                                                                         ccAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTACCAGGCAAACGCCag                            >  3:628783/1‑149 (MQ=255)
                                                                                                                          cAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCATCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCaga                           <  3:54951/149‑1 (MQ=255)
                                                                                                                            gTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAgaga                         >  2:454122/1‑149 (MQ=255)
                                                                                                                             tCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGaa                        <  3:91589/149‑1 (MQ=255)
                                                                                                                             tCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGaa                        <  2:281960/149‑1 (MQ=255)
                                                                                                                              cACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAAc                       <  1:408979/149‑1 (MQ=255)
                                                                                                                               aCGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACg                      <  2:408343/149‑1 (MQ=255)
                                                                                                                                cGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCAGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGc                     >  1:558552/1‑149 (MQ=255)
                                                                                                                                   tGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGcccc                  >  4:176610/1‑149 (MQ=255)
                                                                                                                                       tAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACgg              >  1:303120/1‑149 (MQ=255)
                                                                                                                                         aCTGCGTATGACCGCCGGAAACTAGGAGCGCAACAAACGGAAATTCCGGCGTGTTCTCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACATGGACCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTc            >  4:538750/1‑149 (MQ=255)
                                                                                                                                          cTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTc                                                                                                                   <  4:362863/45‑1 (MQ=255)
                                                                                                                                          cTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTc                                                                                                                   >  3:362863/1‑45 (MQ=255)
                                                                                                                                          cTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTcc                                                                        <  3:206417/88‑1 (MQ=255)
                                                                                                                                          cTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTcc                                                                        >  4:206417/1‑88 (MQ=255)
                                                                                                                                           tGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTcgc          >  3:559346/1‑149 (MQ=255)
                                                                                                                                              gTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGcc       >  3:532761/1‑149 (MQ=255)
                                                                                                                                               tATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGccc                   >  2:714249/1‑136 (MQ=255)
                                                                                                                                               tATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGccc                   <  1:714249/136‑1 (MQ=255)
                                                                                                                                                 tGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAAc    >  1:192461/1‑149 (MQ=255)
                                                                                                                                                  gACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATc                                                      >  1:694590/1‑98 (MQ=255)
                                                                                                                                                  gACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATc                                                      <  2:694590/98‑1 (MQ=255)
                                                                                                                                                  gACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAAcc   >  1:455121/1‑149 (MQ=255)
                                                                                                                                                   aCCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCa  <  4:853988/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CGCCATTTTCGACAGTAACGGCCCGCCAGGATAATCCAGCCCCAGCAGCTTCGCGGTTTTATCAAACGCTTCCCCGGCGGCATCATCGATAGACTCGCCGAGCAGCTCGTACTGACCAATGCCAGTCACGCTGATTAACTGCGTATGACCGCCGGAAACAAGCAGCGCAACAAACGGAAATTCCGGCGGGTTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCA  >  NC_000913/3209983‑3210278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.