BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 982946	107 (0.780)	11 (0.080)	10/214	NT	9.5%	intergenic (+52/‑129)	ldtD/ycbK	murein L,D‑transpeptidase/M15A protease‑related family periplasmic protein
*	?	NC_000913	= 982957	108 (0.830)	11 (0.080)	10/214	NT	9.5%	intergenic (+63/‑118)	ldtD/ycbK	murein L,D‑transpeptidase/M15A protease‑related family periplasmic protein

Only 100 of 156 total aligned reads displayed.

GTCGTACCCAGTATCGTACAGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTA  >  NC_000913/982800‑983093

gTCGTACCCAGTATCGTACAGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGa                                                                                                                                                   <  1:60491/149‑1 (MQ=255)

    tACCCAGTATCGTACAGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCtgcaga                                                                                                                                               >  1:1457611‑M1/1‑143 (MQ=255)

    tACCCAGTATCGTACAGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATtct                                                                                                                                               >  1:114049/1‑149 (MQ=255)

      cccAGTATCGTACAGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTctct                                                                                                                                             <  4:239309/149‑1 (MQ=255)

       ccAGTATCGTACAGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTg                                                                                                                                            <  1:1217713/149‑1 (MQ=255)

         aGTATCGTACAGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGa                                                                                                                                                   >  1:1060505/1‑140 (MQ=255)

                tACAGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTctct                                                                                                                                             >  4:1063684/1‑139 (MQ=255)

                   aGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAgcccc                                                                                                                                     <  2:559323‑M2/144‑6 (MQ=255)

                   aGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAgcccc                                                                                                                                     >  1:559323‑M2/1‑139 (MQ=255)

                   aGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCa                                                                                                                                >  1:586996/1‑149 (MQ=255)

                           aCAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTggg                                                                                                                        >  1:22673/1‑149 (MQ=255)

                               ttATGATCTGCCTGTGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTg                                                                                                                    >  1:286932/1‑149 (MQ=255)

                               ttATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTg                                                                                                                    >  1:913507/1‑149 (MQ=255)

                                tATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGa                                                                                                                   <  2:286932/149‑1 (MQ=255)

                                     tCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTctct                                                                                                                                             >  4:819626/1‑118 (MQ=255)

                                     tCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTctct                                                                                                                                             <  3:819626/118‑1 (MQ=255)

                                     tCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGa                                                                                                                   >  2:1066180/1‑144 (MQ=255)

                                     tCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGa                                                                                                                   <  1:1066180/144‑1 (MQ=255)

                                       tgcctgcGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCtgcagagaatcgccccc                                                                                                                                    <  2:435033‑M1/125‑18 (MQ=255)

                                         cctgcGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTg                                                                                                          <  2:114049/149‑1 (MQ=255)

                                           tgcGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGTGTCATCTTGAc                                                                                                        <  3:839438/149‑1 (MQ=255)

                                                  tCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATCGGGGGCtgcagagaatcgcccccaat                                                                                                                                 <  2:826150‑M1/117‑21 (MQ=255)

                                                  tCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATCGGGGGCtgcagagaatcgcccccaat                                                                                                                                 >  1:826150‑M1/1‑97 (MQ=255)

                                                     aGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCa                                                                                                                                          <  2:1380949/105‑1 (MQ=255)

                                                        tCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTggg                                                                                                                        >  2:921841/1‑120 (MQ=255)

                                                        tCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGtt                                                                                                                     >  1:1425564/1‑123 (MQ=255)

                                                        tCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGtt                                                                                                                     <  2:1425564/123‑1 (MQ=255)

                                                                 gTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAg                                                                                  <  2:913507/149‑1 (MQ=255)

                                                                  tATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGtt                                                                                                                     >  3:502499/1‑113 (MQ=255)

                                                                  tATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGtt                                                                                                                     <  4:502499/113‑1 (MQ=255)

                                                                   aTCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCg                                                                                                                                                    <  3:561833/81‑1 (MQ=255)

                                                                       aaaGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGa                                                                                                                   <  3:118769/110‑1 (MQ=255)

                                                                       aaaGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCct                                                                            >  2:976829/1‑149 (MQ=255)

                                                                         aGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCtgcagagaatcgcccccaa                                                                                                                                  >  1:754681‑M1/1‑74 (MQ=255)

                                                                         aGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCtgcagagaatcgcccccaa                                                                                                                                  <  2:754681‑M1/93‑20 (MQ=255)

                                                                            ggAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGt                                                                                                                      >  3:499928/1‑102 (MQ=255)

                                                                            ggAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTtgt                                                                       >  2:619289/1‑149 (MQ=255)

                                                                            ggAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTtgt                                                                       >  2:1101750/1‑149 (MQ=255)

                                                                             gAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAgccc                                                                                                                                      <  2:682297‑M2/85‑5 (MQ=255)

                                                                              aaCAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTgg                                                                                                                         <  2:1165839/97‑1 (MQ=255)

                                                                              aaCAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTgg                                                                                                                         >  1:1165839/1‑97 (MQ=255)

                                                                                 aaTTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTgg                                                                                                                         <  4:649345/94‑1 (MQ=255)

                                                                                 aaTTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTgg                                                                                                                         >  3:649345/1‑94 (MQ=255)

                                                                                 aaTTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCAt                                                                                                              <  3:992924/105‑1 (MQ=255)

                                                                                 aaTTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGcc                                                                  >  1:321269/1‑149 (MQ=255)

                                                                                   ttAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAgccc                                                                                                                                      >  2:1283168‑M2/1‑75 (MQ=255)

                                                                                   ttAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAgccc                                                                                                                                      <  1:1283168‑M2/79‑5 (MQ=255)

                                                                                   ttAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGc                                                                                         <  4:492295/124‑1 (MQ=255)

                                                                                   ttAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTACAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCtt                                                                         >  4:1200417/1‑140 (MQ=255)

                                                                                   ttAATCAGGTAAATGAAGTAGTTCGAGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCtt                                                                         <  3:1200417/140‑1 (MQ=255)

                                                                                      aTCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAg                                                             >  1:818757/1‑149 (MQ=255)

                                                                                       tCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCtgcagagaatcgcccccaat                                                                                                                                 >  4:925980‑M1/1‑60 (MQ=255)

                                                                                       tCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCa                                                                                                                                >  4:510292/1‑81 (MQ=255)

                                                                                           gTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCat                                                        >  1:968946/1‑149 (MQ=255)

                                                                                           gTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCa                                                         >  4:1117587/1‑148 (MQ=255)

                                                                                             aaaTGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCatat                                                      <  2:22673/149‑1 (MQ=255)

                                                                                              aaTGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCtgcagagaatcgccc                                                                                                                                      <  1:1125904‑M1/68‑16 (MQ=255)

                                                                                              aaTGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCtgcagagaatcgccc                                                                                                                                      >  2:1125904‑M1/1‑53 (MQ=255)

                                                                                                tGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATaaa                                                   >  3:928277/1‑149 (MQ=255)

                                                                                                tGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATaaa                                                   >  1:86569/1‑149 (MQ=255)

                                                                                                tGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCATTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATaaa                                                   <  1:1101750/149‑1 (MQ=255)

                                                                                                 gAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGa                                                                                                         >  3:565552/1‑94 (MQ=255)

                                                                                                 gAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGa                                                                                                         <  1:247992/94‑1 (MQ=255)

                                                                                                 gAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGa                                                                                                         <  4:565552/94‑1 (MQ=255)

                                                                                                 gAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAAc                                                  <  2:1049444/149‑1 (MQ=255)

                                                                                                   agtagtTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAAc                                                  <  3:1093965/147‑1 (MQ=255)

                                                                                                   agtagtTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAAc                                                  >  4:1093965/1‑147 (MQ=255)

                                                                                                    gtagtTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACgg                                                                                           >  1:103884/1‑105 (MQ=255)

                                                                                                    gtagtTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACgg                                                                                           >  3:454732/1‑105 (MQ=255)

                                                                                                    gtagtTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACgg                                                                                           <  2:103884/105‑1 (MQ=255)

                                                                                                    gtagtTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACgg                                                                                           <  4:454732/105‑1 (MQ=255)

                                                                                                          cGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCTATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACAtt                                         <  1:976829/149‑1 (MQ=255)

                                                                                                             ggAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAAc                                                  >  2:284004/1‑137 (MQ=255)

                                                                                                                  tCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTggg                                                                                                                        >  4:1405491/1‑62 (MQ=255)

                                                                                                                  tCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTggg                                                                                                                        <  3:1405491/62‑1 (MQ=255)

                                                                                                                     gTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCtt                                                                                                           >  3:792825/1‑72 (MQ=255)

                                                                                                                      ttGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGa                                                                                                                   <  1:67972/63‑1 (MQ=255)

                                                                                                                         tCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACAtt                                         >  1:101328/1‑134 (MQ=255)

                                                                                                                         tCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGa                          <  4:817690/149‑1 (MQ=255)

                                                                                                                            taataaTTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCtt                                                                         >  1:1329213/1‑99 (MQ=255)

                                                                                                                            gaataatTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGGTTGACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGa                               >  4:946298/2‑141 (MQ=255)

                                                                                                                                aatTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCAAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCAt                   >  3:261572/1‑149 (MQ=255)

                                                                                                                                     gCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTAt                      >  3:1068349/1‑141 (MQ=255)

                                                                                                                                      cATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACaa             >  3:18220/1‑149 (MQ=255)

                                                                                                                                          aTTGGGGGCGATTCTCTGCAgcccccgatcatgctaattattacgacaactgatttccccgaactacttcatttacctgattaattgttccgctttcgatacgatttgcgagctgga                                         <  2:826150‑M2/117‑98 (MQ=255)

                                                                                                                                          aTTGGGGGCGATTCTCTGCAgcccccaatcatggtaattattacgacaactgatttccccgaactacttcatttacctga                                                                              <  3:925980‑M2/80‑61 (MQ=255)

                                                                                                                                          aTTGGGGGCGATTCTCTGCAgcccccaatcatgctaattattacgacaactgatttccccgaactacttcatttacctga                                                                              >  4:925980‑M2/1‑20 (MQ=255)

                                                                                                                                           ttGGGGGCGATTCTCTGCAgcccccaatcatgctaattattacgacaactgatttccccgaactacttcatttacctgattaattgttccgct                                                                <  2:754681‑M2/93‑75 (MQ=255)

                                                                                                                                             gggggCGATTCTCTGCAgcccccaatcatgctaattattacgacaactgatttccccgaactacttcatttacctgattaattgttccgctttcgatacgatttgcgagctggatcgcgcaggca                              >  1:435033‑M2/1‑17 (MQ=255)

                                                                                                                                             gggggCGATTCTCTGCAgcccccaatcatgctaattattacgacaactgatttccccgaactacttcatttacctgattaattgttccgctttcgatacgatttgcgagctggatcgcgcaggca                              <  2:435033‑M2/125‑109 (MQ=255)

                                                                                                                                              ggggCtgcagagaatcgcccccaatcatgctaattattacgacaactgatttccccgaactacttcatttacctgattaattgttccgctttcgatacgatttgcgagctggatcgcgcaggcagatcataattgtaaatatct          >  1:559323‑M1/1‑5 (MQ=255)

                                                                                                                                              ggggCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATg                  <  4:77149/136‑1 (MQ=255)

                                                                                                                                              ggggCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATg                  >  3:77149/1‑136 (MQ=255)

                                                                                                                                               gggCtgcagagaatcgcccccaatcatgctaattattacgacaactgatttccccgaactacttcatttacctgattaattgttc                                                                    <  2:682297‑M1/85‑82 (MQ=255)

                                                                                                                                               gggCtgcagagaatcgcccccaatcatgctaattattacgacaactgatttccccgaactacttcatttacctgattaattgttc                                                                    >  1:682297‑M1/1‑4 (MQ=255)

                                                                                                                                               gggCtgcagagaatcgcccccaatcatgctaattattacgacaactgatttccccgaactacttcatttacctgattaa                                                                          >  2:1283168‑M1/1‑4 (MQ=255)

                                                                                                                                                ggCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGa                                                                                                         >  3:1391459/1‑47 (MQ=255)

                                                                                                                                                ggCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGa                                                                                                         <  4:1391459/47‑1 (MQ=255)

                                                                                                                                                 gCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTg                                        >  2:566052/1‑111 (MQ=255)

                                                                                                                                                 gCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTa  <  4:18220/149‑1 (MQ=255)

GTCGTACCCAGTATCGTACAGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAAATGAAGTAGTTCGGGGAAATCAGTTGTCGTAATAATTAGCATGATTGGGGGCGATTCTCTGCAGCCCCCGTCACTGCTGGGGTTGAGTCATCTTGACGTCTGCTTTACGGGCGGTTAAGGTGCCTCTTGTGCGCCAGAAGTGCATATAAACGATAACATTGACCTGTAGACTTGATTATCATGGACAAATTCGACGCTA  >  NC_000913/982800‑983093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.