New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1021683 =152 (1.100)16 (0.120) 11/216 NT 10.3% coding (546/630 nt) sxy CRP‑S‑dependent promoter expression factor
?NC_000913 1021709 = 132 (1.000)coding (572/630 nt) sxy CRP‑S‑dependent promoter expression factor

Only 100 of 178 total aligned reads displayed.

GGGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAGTAATGCAATCAATAATCCAACTTGTTGTACGAC  >  NC_000913/1021537‑1021831
                                                                                                                                                  |                                                                                                                                                    
gggcagacagcaaagaacctctggtcgtacaacaagttggattattgattgcattactgcctgagattggtcgtctgcaacgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCt                                                                                                                                                    >  3:558879‑M1/147‑149 (MQ=255)
    agacagcaaagaacctctggtcgtacaacaagttggattattgattgcattactgcctgagattggtcgtctgcaacgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCCg                                                                                                                                                <  2:1340657‑M1/7‑1 (MQ=255)
       tGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTg                                                                                                                                             <  2:1360279/149‑1 (MQ=255)
        ggggATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTgg                                                                                                                                            >  2:809881/1‑149 (MQ=255)
         gggATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGc                                                                                                                                           >  2:83826/1‑149 (MQ=255)
          ggATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGt                                                                                                                                              >  2:338752/1‑145 (MQ=255)
           aaagaacctctggtcgtacaacaagttggattattgattgcattactgcctgagattggtcgtctgcaacgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCCGGTGGCAc                                                                                                                                         >  1:1340657‑M1/136‑149 (MQ=255)
               aaGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCAcgccg                                                                                                                                     >  4:513412/1‑149 (MQ=255)
                 ggATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACgccgcc                                                                                                                                   >  3:1146064/1‑149 (MQ=255)
                     tggtcgtacaacaagttggattattgattgcattactgcctgagattggtcgtctgcaacgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCCGGTGGCACGCCGCCAGGa                                                                                                                               >  3:512637‑M1/126‑149 (MQ=255)
                     gTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGa                                                                                                                               >  2:874856/1‑149 (MQ=255)
                     gTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGa                                                                                                                               >  1:529506/1‑149 (MQ=255)
                      tACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAg                                                                                                                              >  3:312777/1‑149 (MQ=255)
                       aCGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGc                                                                                                                             <  1:281510/149‑1 (MQ=255)
                            cGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCa                                                                                                                        <  4:312777/149‑1 (MQ=255)
                            acaacaagttggattattgattgcattactgcctgagattggtcgtctgcaacgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCCGGTGGCACGCCGCCAGGa                                                                                                                               <  3:938565‑M1/24‑1 (MQ=255)
                            acaacaagttggattattgattgcattactgcctgagattggtcgtctgcaacgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCCGGTGGCACGCCGCCAGGa                                                                                                                               >  4:938565‑M1/119‑142 (MQ=255)
                                    ttggattattgattgcattactgcctgagattggtcgtctgcaacgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTc                                                                                                                                                   >  3:824662‑M1/111‑114 (MQ=255)
                                    ttggattattgattgcattactgcctgagattggtcgtctgcaacgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCCGGTGGCACGCCGCCAGGa                                                                                                                               <  1:827049‑M1/24‑1 (MQ=255)
                                     tggattattgattgcattactgcctgagattggtcgtctgcaacgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCCGGTGGCACGCCGCCAgg                                                                                                                                >  1:908673‑M1/110‑132 (MQ=255)
                                       cTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGa                                                                                                             <  2:529506/149‑1 (MQ=255)
                                        ttGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGAc                                                                                                            >  1:1174433/1‑149 (MQ=255)
                                            ggCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGActctc                                                                                                        <  1:83826/149‑1 (MQ=255)
                                            ggCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGActctc                                                                                                        <  2:1373608/149‑1 (MQ=255)
                                                 aaaTGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCAcgccgc                                                                                                                                    <  4:782933/116‑1 (MQ=255)
                                                        ttggttgCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCa                                                                                                                                  <  1:823535/111‑1 (MQ=255)
                                                        ttggttgCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGc                                                                                                                         <  1:100978/120‑1 (MQ=255)
                                                        ttggttgCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGc                                                                                                                         >  2:100978/1‑120 (MQ=255)
                                                        ttggttgCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATggg                                                                                                                 <  3:1312098/128‑1 (MQ=255)
                                                        ttggttgCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAAc                                                                                            >  3:1082878/1‑149 (MQ=255)
                                                         tggttgCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACa                                                                                           <  2:119741/149‑1 (MQ=255)
                                                          ggttgCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAg                                                                                          <  4:1171826/149‑1 (MQ=255)
                                                             tgCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAg                                                                                       <  4:213596/149‑1 (MQ=255)
                                                                       gcagcaAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCgg                                                                             >  1:581846/1‑149 (MQ=255)
                                                                            gcaacgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCCGGTGGCACGCCGCCAGGa                                                                                                                               >  2:1067989‑M1/71‑94 (MQ=255)
                                                                            gcaacgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCCGGTGGCACGCCGCCAGGa                                                                                                                               <  1:1067989‑M1/24‑1 (MQ=255)
                                                                             aaaCAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAg                                                                                                                                 <  3:845412/91‑1 (MQ=255)
                                                                             aaaCAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAg                                                                                                                                 >  4:845412/1‑91 (MQ=255)
                                                                              aaCAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGa                                                                      <  4:1146064/149‑1 (MQ=255)
                                                                               acgccagattactcaagttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCTGGTGGCAc                                                                                                                                         >  2:1156192‑M1/68‑81 (MQ=255)
                                                                                          aCAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGa                                                                                        >  3:48140/1‑119 (MQ=255)
                                                                                            aGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACtt                                                                        <  2:1416515/133‑1 (MQ=255)
                                                                                             gAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGAGTCTCTTACGcc                                                                                                 <  4:1003945/107‑1 (MQ=255)
                                                                                             gAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGcc                                                                                                 >  3:1003945/1‑107 (MQ=255)
                                                                                             gAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGc                                                       >  4:564766/1‑149 (MQ=255)
                                                                                             gAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGc                                                       <  2:581846/149‑1 (MQ=255)
                                                                                             gAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTAAGCCGaaa                                                                                             <  2:795350/111‑1 (MQ=255)
                                                                                              aaacGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAg                                                                                          >  1:681785/1‑113 (MQ=255)
                                                                                              aaaaGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAg                                                                                          <  2:681785/113‑1 (MQ=255)
                                                                                              aaaaGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGa                                                                      <  3:277931/133‑1 (MQ=255)
                                                                                               gttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCCGGTGGCACGCCGCCAGGa                                                                                                                               >  2:602833‑M1/52‑75 (MQ=255)
                                                                                               gttccgcaggaaactcctgtttcggcgtaagagagtcagcccattctgcaaGCTCCCGGTGGCACGCCGCCAGGa                                                                                                                               <  1:602833‑M1/24‑1 (MQ=255)
                                                                                               aaaGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAg                                                     >  3:750665/1‑149 (MQ=255)
                                                                                               aaaGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAg                                                     >  1:62944/1‑149 (MQ=255)
                                                                                                aaGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACtt                                                                        <  4:201791/129‑1 (MQ=255)
                                                                                                aaGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACtt                                                                        >  3:201791/1‑129 (MQ=255)
                                                                                                 aGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAgac                                                   >  1:1146021/1‑149 (MQ=255)
                                                                                                  gATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTg                                                        >  2:453990/1‑143 (MQ=255)
                                                                                                    ttCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAg                                                                                       >  4:349114/1‑110 (MQ=255)
                                                                                                    ttCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAgacgac                                                >  3:1113080/1‑149 (MQ=255)
                                                                                                     tCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAgacga                                                 >  1:1399714/1‑147 (MQ=255)
                                                                                                     tCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGAcc                                               >  1:20496/1‑149 (MQ=255)
                                                                                                        gTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAAt                                            >  4:500808/1‑149 (MQ=255)
                                                                                                        gTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAAt                                            >  3:327849/1‑149 (MQ=255)
                                                                                                         tttATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGaaa                                                                                             <  3:1357724/99‑1 (MQ=255)
                                                                                                         tttATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAAtc                                           <  4:1113080/149‑1 (MQ=255)
                                                                                                            aTGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGtt                                                                                     <  1:809717/104‑1 (MQ=255)
                                                                                                            aTGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCa                                        <  2:952578/149‑1 (MQ=255)
                                                                                                             tGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAg                                       <  2:1146021/149‑1 (MQ=255)
                                                                                                                ttGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGActctc                                                                                                        >  3:595497/1‑81 (MQ=255)
                                                                                                                ttGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGa                                                                      >  4:1322953/1‑115 (MQ=255)
                                                                                                                ttGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGa                                                                      <  3:724781/115‑1 (MQ=255)
                                                                                                                ttGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGa                                                                      >  4:724781/1‑115 (MQ=255)
                                                                                                                ttGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCa                                    >  2:482725/1‑149 (MQ=255)
                                                                                                                 tGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAg                                   <  2:20496/149‑1 (MQ=255)
                                                                                                                      gTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGa                                                                      <  4:822517/109‑1 (MQ=255)
                                                                                                                      gTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGa                                                                      >  3:822517/1‑109 (MQ=255)
                                                                                                                          cATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTg                                                                       >  3:868005/1‑104 (MQ=255)
                                                                                                                          cATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTg                                                                       <  4:868005/104‑1 (MQ=255)
                                                                                                                              aTCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAg                                   <  3:688352/136‑1 (MQ=255)
                                                                                                                              aTCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAg                                   >  4:688352/1‑136 (MQ=255)
                                                                                                                               tCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCt                                                                                 <  4:1029834/89‑1 (MQ=255)
                                                                                                                                cGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAGTAATGCAATCaataa                    <  2:62944/149‑1 (MQ=255)
                                                                                                                                cGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAGTAATGCAATCaataa                    <  1:1446076/149‑1 (MQ=255)
                                                                                                                                  gCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTGTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGa                                                                      >  2:518935/1‑97 (MQ=255)
                                                                                                                                  gCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGa                                                                      <  1:518935/97‑1 (MQ=255)
                                                                                                                                    aTTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGaaa                                                                                             <  3:1372464/72‑1 (MQ=255)
                                                                                                                                    aTTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGaaa                                                                                             >  4:1372464/1‑72 (MQ=255)
                                                                                                                                        aTGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAgacga                                                 >  4:1191274/1‑112 (MQ=255)
                                                                                                                                        aTGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAgacga                                                 <  3:1191274/112‑1 (MQ=255)
                                                                                                                                        aTGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAAtc                                           >  2:1249000/1‑118 (MQ=255)
                                                                                                                                        aTGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAAtc                                           <  1:1249000/118‑1 (MQ=255)
                                                                                                                                        aTGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAAtc                                           <  1:463336/118‑1 (MQ=255)
                                                                                                                                        aTGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAGTAATGCAATCAATAATCCaa               <  1:354140/146‑1 (MQ=255)
                                                                                                                                        aTGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAGTAATGCAATCAATAATCCaa               >  2:354140/1‑146 (MQ=255)
                                                                                                                                        aTGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAGTAATGCAATCAATAATCCAAc              <  2:670501/147‑1 (MQ=255)
                                                                                                                                        aTGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAGTAATGCAATCAATAATCCAAc              >  1:670501/1‑147 (MQ=255)
                                                                                                                                          gAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAg                                                                     >  4:128393/1‑90 (MQ=255)
                                                                                                                                               tGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAGTAACGCAATCAATAATCCAACTTGTTGTAc     <  1:1209303/149‑1 (MQ=255)
                                                                                                                                                aaGCTCCTGGCGGCGTGCCACCGGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCa                                        <  2:825707‑M1/111‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GGGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAATCTGGCGTTGCAGACGACCAATCTCAGGCAGTAATGCAATCAATAATCCAACTTGTTGTACGAC  >  NC_000913/1021537‑1021831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.