BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3291700	201 (1.460)	14 (0.110)	5/214	NT	6.5%	coding (360/1092 nt)	yraK	putative fimbrial‑like adhesin protein
*	?	NC_000913	= 3291705	210 (1.610)	14 (0.110)	5/214	NT	6.5%	coding (365/1092 nt)	yraK	putative fimbrial‑like adhesin protein

Only 100 of 261 total aligned reads displayed.

CCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTA  >  NC_000913/3291552‑3291846

ccTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACC                                                                                                                                                    <  2:321508‑M1/149‑1 (MQ=255)

 cTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCg                                                                                                                                                   >  2:1162911/1‑149 (MQ=255)

  tGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACACAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGa                                                                                                                                                  >  2:380105/1‑149 (MQ=255)

         cGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAggtt                                                                                                                                           >  1:1040631‑M2/1‑145 (MQ=255)

           ggTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAggttgt                                                                                                                                         >  4:319986‑M2/1‑143 (MQ=255)

             tAAGGCAGTTACACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCtggtcggttgtga                                                                                                                                       <  1:435404‑M1/149‑14 (MQ=255)

             tAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCtggtcggttgtga                                                                                                                                       <  4:431528‑M1/149‑14 (MQ=255)

              aaGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGtctc                                                                                                                                      >  1:834988/1‑149 (MQ=255)

               aGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAggtt                                                                                                                                           >  2:608485‑M2/1‑139 (MQ=255)

                    gTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTaa                                                                                                                                <  1:152909/149‑1 (MQ=255)

                           ttGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGa                                                                                                                         >  4:176307/1‑149 (MQ=255)

                                 atatGTTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGa                                                                                                                                                  >  3:736309/1‑118 (MQ=255)

                                 atatGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTcaca                                                                                                                   <  3:176307/149‑1 (MQ=255)

                                    tGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAg                                                                                                                >  3:1278897/1‑149 (MQ=255)

                                     ggTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACAcc                                                                                                                            >  4:667326/1‑136 (MQ=255)

                                     ggTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACAcc                                                                                                                            <  3:667326/136‑1 (MQ=255)

                                           ccccGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATaaaaa                                                                                                         >  2:531026/1‑149 (MQ=255)

                                           ccccGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATaaaaa                                                                                                         >  1:797212/1‑149 (MQ=255)

                                             ccGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCtggtcggttgtga                                                                                                                                       >  3:1296271‑M1/1‑104 (MQ=255)

                                             ccGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGt                                                                                                                                   <  4:1093277/121‑1 (MQ=255)

                                             ccGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGt                                                                                                                                   >  3:1093277/1‑121 (MQ=255)

                                             ccGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAaac                                                                                                       >  4:281826/1‑149 (MQ=255)

                                               gTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAaacaa                                                                                                     <  4:1197339/149‑1 (MQ=255)

                                                   ttACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGa                                                                                                                         >  2:992470/1‑125 (MQ=255)

                                                   ttACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACg                                                                                                 >  4:1388259/1‑149 (MQ=255)

                                                    tACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGt                                                                                                                                   <  4:918388/114‑1 (MQ=255)

                                                     accaccACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGa                                                                                                                         <  3:552626/123‑1 (MQ=255)

                                                     accaccACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGa                                                                                                                         >  4:552626/1‑123 (MQ=255)

                                                     accaccACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTcaca                                                                                                                   >  1:125768/1‑129 (MQ=255)

                                                       caccacTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGa                                                                                                                                                  >  1:302502/1‑96 (MQ=255)

                                                       caccacTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGa                                                                                                                                                  <  2:302502/96‑1 (MQ=255)

                                                        accacTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTctct                                                                                                                                     <  2:1192008/108‑1 (MQ=255)

                                                        accacTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTctct                                                                                                                                     >  1:1192008/1‑108 (MQ=255)

                                                        accacTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACgg                                                                                                >  1:506679/1‑145 (MQ=255)

                                                           acTGGACATCAGACAGGATGTTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTaa                                                                                                                                >  3:863658/1‑110 (MQ=255)

                                                              ggACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTctgc                                                                                      <  2:1052581/149‑1 (MQ=255)

                                                              ggACATCAGACAGGATATTACAAACTCAATCACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTctgc                                                                                      >  2:809591/1‑149 (MQ=255)

                                                                 cATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAaacaa                                                                                                     >  1:1239319/1‑131 (MQ=255)

                                                                 cATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAaacaa                                                                                                     <  2:1239319/131‑1 (MQ=255)

                                                                   tCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAaacaac                                                                                                    <  1:150410/130‑1 (MQ=255)

                                                                   tCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAaacaa                                                                                                     >  3:800145/1‑129 (MQ=255)

                                                                      gACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAaca                                                                                                                              <  1:703935/101‑1 (MQ=255)

                                                                      gACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTctgct                                                                                     >  2:714977/1‑142 (MQ=255)

                                                                           gATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTcac                                                                                                                    >  1:1375250/1‑106 (MQ=255)

                                                                             tatTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACggg                                                                       >  2:151715/1‑149 (MQ=255)

                                                                               ttACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGt                                                                                                                                   <  2:1280561/87‑1 (MQ=255)

                                                                               ttACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATaaaaa                                                                                                         <  4:896029/113‑1 (MQ=255)

                                                                               ttACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGgtg                                                                     >  2:1373028/1‑149 (MQ=255)

                                                                                 aCAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAacaaca                                                                                                   >  1:1018790/1‑117 (MQ=255)

                                                                                       tCAATGACAGCCTGGATATTAAACCCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAg                                                             <  1:809591/149‑1 (MQ=255)

                                                                                       tCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGttt                                                                  >  1:259771/1‑144 (MQ=255)

                                                                                       tCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGttt                                                                  <  2:259771/144‑1 (MQ=255)

                                                                                          aTGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGt                                                          <  3:1388259/149‑1 (MQ=255)

                                                                                            gACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGa                                                        >  2:173868/1‑149 (MQ=255)

                                                                                                 ccTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGgt                                                                      >  1:930323/1‑130 (MQ=255)

                                                                                                  cTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTcaca                                                                                                                   >  1:1302355/1‑84 (MQ=255)

                                                                                                  cTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTcaca                                                                                                                   <  2:1302355/84‑1 (MQ=255)

                                                                                                    ggATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGtctc                                                >  3:932637/1‑149 (MQ=255)

                                                                                                        atTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCtggtcggttgtga                                                                                                                                       >  4:1045709‑M1/1‑45 (MQ=255)

                                                                                                        atTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGCCTCTGTTAACACCCGATTCACACAGa                                                                                                               >  1:114794/1‑82 (MQ=255)

                                                                                                         ttAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCtggtcggttgtga                                                                                                                                       >  1:50168‑M1/1‑44 (MQ=255)

                                                                                                         ttAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTcacac                                                                                                                  >  1:1332756/1‑78 (MQ=255)

                                                                                                         ttAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAgg                                                            >  3:1356015/1‑132 (MQ=255)

                                                                                                         ttAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTAt                                           <  2:140914/149‑1 (MQ=255)

                                                                                                         ttAAAACCACAGTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACTCGATTcacac                                                                                                                  <  4:949686/78‑1 (MQ=255)

                                                                                                           aaaaCCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGgt                                                                      >  2:925413/1‑120 (MQ=255)

                                                                                                             aaCCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACTCCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGAc                                       >  4:1398194/1‑149 (MQ=255)

                                                                                                             aaCCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAggg                                                           <  2:686999/129‑1 (MQ=255)

                                                                                                             aaCCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGAc                                       >  4:496747/1‑149 (MQ=255)

                                                                                                               ccACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGAccc                                     <  1:883738/149‑1 (MQ=255)

                                                                                                                         ggCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGgt                                                                      >  1:378102/1‑106 (MQ=255)

                                                                                                                         ggCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGt                                                          <  4:1375611/118‑1 (MQ=255)

                                                                                                                         ggCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTaa                                >  1:72951/1‑144 (MQ=255)

                                                                                                                         ggCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTg                           <  1:173868/149‑1 (MQ=255)

                                                                                                                          gCAAACGACATTCCTGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTgg                          >  2:837074/1‑149 (MQ=255)

                                                                                                                           cAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGt                         <  2:739932/149‑1 (MQ=255)

                                                                                                                            aaaCGACATTCCAGGACTCACAACCCACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACAAGGTATATTCTGCTGCAACCCAAACGGgt                                                                      >  3:36048/1‑103 (MQ=255)

                                                                                                                               cGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATaaaa                                                                                                          <  4:294513/64‑1 (MQ=255)

                                                                                                                               cGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATaaaa                                                                                                          >  3:294513/1‑64 (MQ=255)

                                                                                                                                    ttCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTgg                          <  4:1271341/139‑1 (MQ=255)

                                                                                                                                        aGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTTACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGaa                    >  4:1295874/1‑141 (MQ=255)

                                                                                                                                            cTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAc        <  3:286778/149‑1 (MQ=255)

                                                                                                                                             tCACAACCGACCAggttgtgagtcctggaatgtcgtttgcctgtaatgtggttttaatatccaggctgtcattgagtttgtaatatcctgtctgatgtccagtggtggtaagtacgg                                       <  4:820730‑M2/117‑105 (MQ=255)

                                                                                                                                             tCACAACCGACCAggttgtgagtcctggaatgtcgtttgcctgtaatgtggttttaatatccaggctgtcattgagtttgtaatatcctgtctgatgtccagtggtggtaagtacgg                                       >  1:1125744‑M2/1‑13 (MQ=255)

                                                                                                                                             tCACAACCGACCAggttgtgagtcctggaatgtcgtttgcctgtaatgtggttttaatatccaggctgtcattgagtttgtaatatcctgtctgatgtccagtggtggtaagtacgg                                       <  2:1125744‑M2/117‑105 (MQ=255)

                                                                                                                                             tCACAACCGACCAggttgtgagtcctggaatgtcgtttgcctgtaatgtggttttaatatccaggctgtcattgagtttgtaatatcctgtctgatgtccagtggtggtaagtacgg                                       <  4:1296271‑M2/117‑105 (MQ=255)

                                                                                                                                             tCACAACCGACCAggttgtgagtcctggaatgtcgtttgcctgtaatgtggttttaatatccaggctgtcattgagtttgtaatatcctgtctgatgtccagtggtggtaagtacgg                                       >  3:820730‑M2/1‑13 (MQ=255)

                                                                                                                                             tCACAACCGACCAggttgtgagtcctggaatgtcgtttgcctgtaatgtggttttaat                                                                                                  <  3:1045709‑M2/58‑46 (MQ=255)

                                                                                                                                             tCACAACCGACCAggttgtgagtcctggaatgtcgtttgcctgtaatgtggttttaa                                                                                                   <  2:50168‑M2/57‑45 (MQ=255)

                                                                                                                                             tCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGt                         <  3:1218698/131‑1 (MQ=255)

                                                                                                                                              cacaACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAac                   <  3:993559/136‑1 (MQ=255)

                                                                                                                                              aacaaCCGACCAgcttgtgagtcctggaatgtcgtttgcctgtaatgtggttttaatatccaggctgtcattgagtttgtaatatcctgtctgatgtccagtggtggtaagtacggggctgaccatatagacaagtttaactgccttac      <  4:772747‑M2/148‑138 (MQ=255)

                                                                                                                                                 aaCCtggtcggttgtgagtcctggaatgtcgtttgcctgtaatgtggttttaatatccaggctgtcattgagtttgtaatatcctgtctgatgtccagtggtggtaagtacggggctgaccatatagacaagtttaactgcct         <  1:608485‑M1/143‑140 (MQ=255)

                                                                                                                                                 aaCCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGc                                                                <  4:473954/88‑1 (MQ=255)

                                                                                                                                                 aaCCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGc                                                                >  3:473954/1‑88 (MQ=255)

                                                                                                                                                 aaCCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGt                         <  3:91344/127‑1 (MQ=255)

                                                                                                                                                  aCCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACgg                                                                        <  1:676847/79‑1 (MQ=255)

                                                                                                                                                  aCCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAat                               <  4:72092/120‑1 (MQ=255)

                                                                                                                                                  aCCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTa  <  3:496747/149‑1 (MQ=255)

                                                                                                                                                    cGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCtt           >  4:780800/1‑138 (MQ=255)

CCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTA  >  NC_000913/3291552‑3291846

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.