BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3349145	99 (0.720)	13 (0.100)	9/220	NT	12.2%	coding (665/729 nt)	mtgA	biosynthetic peptidoglycan transglycosylase
*	?	NC_000913	= 3349179	90 (0.670)	13 (0.100)	9/220	NT	12.2%	coding (631/729 nt)	mtgA	biosynthetic peptidoglycan transglycosylase

Only 100 of 154 total aligned reads displayed.

CCCAACCGGCGCTGGCTATTGCCCTGCAGAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCC  >  NC_000913/3348999‑3349293

 ccAACCGGCGCTGGCTATTGCCCTGCAGAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACg                                                                                                                                                   >  1:1032266/1‑149 (MQ=255)

  cAACCGGCGCTGGCTTTTGCCCTGCAGAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGc                                                                                                                                                  >  1:707752/1‑149 (MQ=255)

      cGGCGCTGGCTTTTGCCCTGCAGAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGa                                                                                                                                              <  2:707752/149‑1 (MQ=255)

           cTGGCTATTGCCCTGCAGAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCtcgccatcgggct                                                                                                                                         >  1:907097‑M1/1‑136 (MQ=255)

            tGGCTATTGCCCTGCAGAATGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTa                                                                                                                                        >  3:188111/1‑149 (MQ=255)

                tATTGCCCTGCAGAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCtcgccatcgggctacgtg                                                                                                                                    >  1:1163548‑M1/1‑131 (MQ=255)

                      ccTGCAGAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCCCTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGc                                                                                                                              >  2:1089876/1‑149 (MQ=255)

                            gAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCtcgccatcgggctacgtgcgtagccgtcag                                                                                                                        <  2:907097‑M1/149‑31 (MQ=255)

                            gAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCacgccatcgggctacgtgcgtagccgtcag                                                                                                                        <  1:178151‑M1/149‑31 (MQ=255)

                               aGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCg                                                                                                                     <  2:1032266/149‑1 (MQ=255)

                                gATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCga                                                                                                                    >  2:281820/1‑149 (MQ=255)

                                gATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCga                                                                                                                    >  2:325363/1‑149 (MQ=255)

                                  tCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCga                                                                                                                    <  3:524729/147‑1 (MQ=255)

                                  tCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCga                                                                                                                    >  4:524729/1‑147 (MQ=255)

                                   cTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAgga                                                                                                                 <  4:666667‑M2/149‑4 (MQ=255)

                                    tGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCtcgccatcgggctacgtgcgtagccgtcaggcgtggat                                                                                                                <  2:1163548‑M1/149‑39 (MQ=255)

                                     gCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGgaga                                                                                                               >  2:1299595/1‑149 (MQ=255)

                                       aaCCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACt                                                                                                             >  2:976808/1‑149 (MQ=255)

                                       aaCCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACt                                                                                                             >  4:140827/1‑149 (MQ=255)

                                          cTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTg                                                                                                          >  3:1026352/1‑149 (MQ=255)

                                           tCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGGCGTAAAATCCa                                                                                                                                                     <  3:839538/105‑1 (MQ=255)

                                           tCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCacgccatcgggctacgtgcgtagccgtcag                                                                                                                        >  1:784209‑M1/1‑104 (MQ=255)

                                           tCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCacgccatcgggctacgtgcgtagccgtcag                                                                                                                        <  2:784209‑M1/134‑31 (MQ=255)

                                           tCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACttt                                                                                                           >  4:133401/1‑147 (MQ=255)

                                             gTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCtcgccatcgggctacgtgcgtagccgtcaggcgtgga                                                                                                                 <  4:683242‑M1/139‑38 (MQ=255)

                                             gTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCtcgccatcgggctacgtgcgtagccgtcaggcgtgga                                                                                                                 >  3:683242‑M1/1‑102 (MQ=255)

                                             gTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGaaa                                                                                                       <  1:1299595/149‑1 (MQ=255)

                                             gTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGaaa                                                                                                       <  1:976808/149‑1 (MQ=255)

                                                    cAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCAc                                                                                                                                                    <  2:746823/97‑1 (MQ=255)

                                                    cAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCAc                                                                                                                                                    >  1:746823/1‑97 (MQ=255)

                                                     aaaaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAgga                                                                                                                 <  4:807158‑M2/131‑4 (MQ=255)

                                                     aaaaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTgg                                                                                               <  1:1089876/149‑1 (MQ=255)

                                                      aaaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCacgccatcgggctacgtgcgtagccgtcaggcgtggat                                                                                                                >  4:1258566‑M1/1‑93 (MQ=255)

                                                      aaaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGAt                                                                                                                         <  2:515839/122‑1 (MQ=255)

                                                      aaaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAgga                                                                                                                 >  3:569482‑M2/1‑127 (MQ=255)

                                                      aaaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAgga                                                                                                                 <  4:569482‑M2/130‑4 (MQ=255)

                                                       aaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGAt                                                                                             <  1:1024865/149‑1 (MQ=255)

                                                           cTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTa                                                                                           >  4:151016/1‑147 (MQ=255)

                                                           cTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAgg                                                                                         <  1:325363/149‑1 (MQ=255)

                                                           cTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAgg                                                                                         <  1:281820/149‑1 (MQ=255)

                                                                ccTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGa                                                                                                                          <  3:358309/111‑1 (MQ=255)

                                                                ccTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGa                                                                                                                          >  4:358309/1‑111 (MQ=255)

                                                                ccTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGa                                                                                              >  3:381786/1‑139 (MQ=255)

                                                                ccTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGa                                                                                              <  4:381786/139‑1 (MQ=255)

                                                                     cTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCt                                                                               <  4:1026352/149‑1 (MQ=255)

                                                                      ttCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTg                                                                              >  1:978621/1‑149 (MQ=255)

                                                                             gAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGcc                                                                                                                             >  3:1402310/1‑95 (MQ=255)

                                                                                 cTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCtcgccatcgggctacgtgcgtagccgtcaggcgtgga                                                                                                                 <  4:475744‑M1/103‑38 (MQ=255)

                                                                                 cTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCtcgccatcgggctacgtgcgtagccgtcaggcgtgga                                                                                                                 >  3:475744‑M1/1‑66 (MQ=255)

                                                                                 cTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAATGGATTAGGTAATACAGCTGCCAGTAATGCa                                                                   >  3:589534/1‑149 (MQ=255)

                                                                                        cAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGaa                                                                                                   >  2:650642/1‑110 (MQ=255)

                                                                                        cAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGaa                                                                                                   <  1:650642/110‑1 (MQ=255)

                                                                                         aGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGTGCGTAGccg                                                                                                                            >  1:817778/1‑83 (MQ=255)

                                                                                         aGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGTGCGTAGccg                                                                                                                            <  2:817778/84‑2 (MQ=255)

                                                                                              gtgtTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCa                                                                   <  1:315669/136‑1 (MQ=255)

                                                                                              gtgtTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCa                                                                   >  2:315669/1‑136 (MQ=255)

                                                                                                gttgttGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCt                                                                                                                                         >  2:912650/1‑64 (MQ=255)

                                                                                                gttgttGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCt                                                                                                                                         <  1:912650/64‑1 (MQ=255)

                                                                                                   gttgCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCg                                                                                                                     >  3:1195270/1‑81 (MQ=255)

                                                                                                   gttgCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCg                                                                                                                     <  4:1195270/81‑1 (MQ=255)

                                                                                                    ttgCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGtt                                                <  3:140827/149‑1 (MQ=255)

                                                                                                    ttgCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGtt                                                >  4:1399042/1‑149 (MQ=255)

                                                                                                       cATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTg                                                                                                <  3:434802/98‑1 (MQ=255)

                                                                                                       cATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTg                                                                                                >  4:434802/1‑98 (MQ=255)

                                                                                                        aTAAGCGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGt                                                                                                 <  4:1110680/96‑1 (MQ=255)

                                                                                                        aTAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCt                                            >  2:225038/1‑149 (MQ=255)

                                                                                                                 tCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGTGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCgg                                                       >  4:522530/1‑129 (MQ=255)

                                                                                                                 tCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCgg                                                       <  3:522530/129‑1 (MQ=255)

                                                                                                                 tCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGttt                                   >  3:1304138/1‑149 (MQ=255)

                                                                                                                 tCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGttt                                   <  2:978621/149‑1 (MQ=255)

                                                                                                                   aCCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTtgt                                 >  1:1228834/1‑149 (MQ=255)

                                                                                                                       ccTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGaa                             <  3:1153044/149‑1 (MQ=255)

                                                                                                                       ccTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGaa                             <  2:1205811/149‑1 (MQ=255)

                                                                                                                        cTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCt                                                                               <  1:557870/98‑1 (MQ=255)

                                                                                                                             tGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCgg                                                       >  1:882757/1‑117 (MQ=255)

                                                                                                                             tGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCgg                                                       <  2:882757/117‑1 (MQ=255)

                                                                                                                               aTACATCTGCCGTCAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCg                                                        <  3:1211159/114‑1 (MQ=255)

                                                                                                                               aTACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGtt                     <  4:1175031/149‑1 (MQ=255)

                                                                                                                                tACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTtg                    >  2:484089/1‑149 (MQ=255)

                                                                                                                                  cATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTtgtg                  >  2:176645/1‑149 (MQ=255)

                                                                                                                                    tCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGt                                                                                                 >  3:483658/1‑68 (MQ=255)

                                                                                                                                    tCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGt                                                                                                 <  4:483658/68‑1 (MQ=255)

                                                                                                                                      tGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGc              >  4:775943/1‑149 (MQ=255)

                                                                                                                                         cGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGc           <  3:666667/149‑1 (MQ=255)

                                                                                                                                         cGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGc           <  1:484089/149‑1 (MQ=255)

                                                                                                                                              aaTCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGa      <  1:176645/149‑1 (MQ=255)

                                                                                                                                               aTCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGTggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttt                       >  4:1258566‑M2/1‑38 (MQ=255)

                                                                                                                                               aTCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGTggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttt                       <  3:1258566‑M2/131‑94 (MQ=255)

                                                                                                                                                tCCtcgccatcgggctacgtgcgtagccgtcaggcgtggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcacgaggttgcag    >  3:336376‑M1/1‑3 (MQ=255)

                                                                                                                                                tCCtcgccatcgggctacgtgcgtagccgtcaggcgtggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcacgaggttgcag    <  4:666667‑M1/149‑147 (MQ=255)

                                                                                                                                                tCCtcgccatcgggctacgtgcgtagccgtcaggcgtggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgtttt                      >  3:807158‑M1/1‑3 (MQ=255)

                                                                                                                                                tCCtcgccatcgggctacgtgcgtagccgtcaggcgtggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttt                       >  3:569482‑M1/1‑3 (MQ=255)

                                                                                                                                                tCCtcgccatcgggctacgtgcgtagccgtcaggcgtggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttt                       <  4:569482‑M1/130‑128 (MQ=255)

                                                                                                                                                tCCtcgccatcgggctacgtgcgtagccgtcaggcgtggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgtt                        <  1:294345‑M1/129‑127 (MQ=255)

                                                                                                                                                tCCtcgccatcgggctacgtgcgtagccgtcaggcgtggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgtt                        >  2:294345‑M1/1‑3 (MQ=255)

                                                                                                                                                tCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcac              >  3:683242‑M2/1‑37 (MQ=255)

                                                                                                                                                tCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcac              <  4:683242‑M2/139‑103 (MQ=255)

                                                                                                                                                tCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGAc     <  3:694170/148‑1 (MQ=255)

                                                                                                                                                tCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGAc     >  4:694170/1‑148 (MQ=255)

                                                                                                                                                  ctcgccatcgggctacgtgcgtagccgtcaggcgtggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcacgaggttgcagat  <  2:1024865‑M1/149‑149 (MQ=255)

CCCAACCGGCGCTGGCTATTGCCCTGCAGAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCC  >  NC_000913/3348999‑3349293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.