BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3349145	99 (0.720)	13 (0.100)	9/220	NT	12.2%	coding (665/729 nt)	mtgA	biosynthetic peptidoglycan transglycosylase
*	?	NC_000913	= 3349179	90 (0.670)	13 (0.100)	9/220	NT	12.2%	coding (631/729 nt)	mtgA	biosynthetic peptidoglycan transglycosylase

Only 100 of 121 total aligned reads displayed.

GATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCAAACACACCGTCGCCAAATTCGGC  >  NC_000913/3349031‑3349317

gATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCga                                                                                                                                            >  2:281820/1‑149 (MQ=255)

 aTCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAg                                                                                                                                           <  2:1024865‑M2/149‑2 (MQ=255)

  tCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCga                                                                                                                                            >  4:524729/1‑147 (MQ=255)

  tCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCga                                                                                                                                            <  3:524729/147‑1 (MQ=255)

   cTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAgga                                                                                                                                         <  4:666667‑M2/149‑4 (MQ=255)

   cTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAgga                                                                                                                                         >  3:336376‑M2/1‑146 (MQ=255)

     gCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGgaga                                                                                                                                       >  2:1299595/1‑149 (MQ=255)

       aaCCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACt                                                                                                                                     >  4:140827/1‑149 (MQ=255)

          cTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTg                                                                                                                                  >  3:1026352/1‑149 (MQ=255)

           tCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACttt                                                                                                                                   >  4:133401/1‑147 (MQ=255)

           tCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACttt                                                                                                                                   <  3:133401/147‑1 (MQ=255)

             gTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGaaa                                                                                                                               <  1:1299595/149‑1 (MQ=255)

                     aaaaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAgga                                                                                                                                         >  3:807158‑M2/1‑128 (MQ=255)

                     aaaaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTgg                                                                                                                       <  1:1089876/149‑1 (MQ=255)

                      aaaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAgga                                                                                                                                         <  4:569482‑M2/130‑4 (MQ=255)

                       aaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAgga                                                                                                                                         <  1:294345‑M2/129‑4 (MQ=255)

                       aaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAgga                                                                                                                                         >  2:294345‑M2/1‑126 (MQ=255)

                       aaCGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGAt                                                                                                                     <  1:1024865/149‑1 (MQ=255)

                           cTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTa                                                                                                                   >  4:151016/1‑147 (MQ=255)

                           cTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAgg                                                                                                                 <  1:281820/149‑1 (MQ=255)

                           cTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAgg                                                                                                                 <  1:325363/149‑1 (MQ=255)

                              gCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTaa                                                                                                              <  1:375609/149‑1 (MQ=255)

                                ccTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGa                                                                                                                      >  3:381786/1‑139 (MQ=255)

                                ccTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGa                                                                                                                      <  4:381786/139‑1 (MQ=255)

                                     cTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCt                                                                                                       <  4:1026352/149‑1 (MQ=255)

                                      ttCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTg                                                                                                      >  1:978621/1‑149 (MQ=255)

                                              aaGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAAt                                                                                              <  3:510273/149‑1 (MQ=255)

                                                 cTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAATGGATTAGGTAATACAGCTGCCAGTAATGCa                                                                                           >  3:589534/1‑149 (MQ=255)

                                                        cAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGaa                                                                                                                           <  1:650642/110‑1 (MQ=255)

                                                              gtgtTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCa                                                                                           <  1:315669/136‑1 (MQ=255)

                                                              gtgtTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCa                                                                                           >  2:315669/1‑136 (MQ=255)

                                                                    ttgCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGtt                                                                        >  4:1399042/1‑149 (MQ=255)

                                                                    ttgCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGtt                                                                        <  3:140827/149‑1 (MQ=255)

                                                                      gCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTg                                                                      >  2:171447/1‑149 (MQ=255)

                                                                       cATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTg                                                                                                                        >  4:434802/1‑98 (MQ=255)

                                                                        aTAAGCGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGt                                                                                                                         <  4:1110680/96‑1 (MQ=255)

                                                                        aTAAGCGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGt                                                                                                                         >  3:1110680/1‑96 (MQ=255)

                                                                        aTAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAg                                                                                                         >  2:76250/1‑112 (MQ=255)

                                                                        aTAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCt                                                                    >  2:225038/1‑149 (MQ=255)

                                                                         tAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTc                                                                   >  3:573897/1‑149 (MQ=255)

                                                                                 tCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCgg                                                                               <  3:522530/129‑1 (MQ=255)

                                                                                 tCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGttt                                                           >  3:1304138/1‑149 (MQ=255)

                                                                                 tCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGttt                                                           <  2:978621/149‑1 (MQ=255)

                                                                                   aCCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTtgt                                                         >  1:1228834/1‑149 (MQ=255)

                                                                                   aCCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAATGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTtgt                                                         <  4:589534/149‑1 (MQ=255)

                                                                                       ccTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGaa                                                     <  3:1153044/149‑1 (MQ=255)

                                                                                        cTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCt                                                                                                       >  2:557870/1‑98 (MQ=255)

                                                                                        cTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCt                                                                                                       <  1:557870/98‑1 (MQ=255)

                                                                                            cTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAAc                                                <  1:171447/149‑1 (MQ=255)

                                                                                             tGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCgg                                                                               <  2:882757/117‑1 (MQ=255)

                                                                                             tGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCgg                                                                               >  1:882757/1‑117 (MQ=255)

                                                                                               aTACATCTGCCGTCAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCg                                                                                <  3:1211159/114‑1 (MQ=255)

                                                                                               aTACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCg                                                                                >  4:1211159/1‑114 (MQ=255)

                                                                                               aTACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGtt                                             <  4:1175031/149‑1 (MQ=255)

                                                                                                tACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGttt                                                                       >  2:976905/1‑122 (MQ=255)

                                                                                                tACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGttt                                                                       <  1:976905/122‑1 (MQ=255)

                                                                                                tACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTtg                                            >  2:484089/1‑149 (MQ=255)

                                                                                                  cATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTtgtg                                          >  2:176645/1‑149 (MQ=255)

                                                                                                    tCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGt                                                                                                                         <  4:483658/68‑1 (MQ=255)

                                                                                                    tCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGt                                                                                                                         >  3:483658/1‑68 (MQ=255)

                                                                                                      tGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGc                                      >  4:775943/1‑149 (MQ=255)

                                                                                                         cGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGc                                   <  3:666667/149‑1 (MQ=255)

                                                                                                         cGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGc                                   <  1:484089/149‑1 (MQ=255)

                                                                                                               aTCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGTggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttt                                               >  4:1258566‑M2/1‑38 (MQ=255)

                                                                                                               aTCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGTggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttt                                               <  3:1258566‑M2/131‑94 (MQ=255)

                                                                                                               aTCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcacgaggttgca                             <  2:1163548‑M2/149‑112 (MQ=255)

                                                                                                               aTCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAAt                                                                                              >  3:684574/1‑84 (MQ=255)

                                                                                                                tCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcac                                      >  3:683242‑M2/1‑37 (MQ=255)

                                                                                                                tCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcac                                      <  4:683242‑M2/139‑103 (MQ=255)

                                                                                                                tCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaag                                                                          <  4:475744‑M2/103‑67 (MQ=255)

                                                                                                                tCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaag                                                                          >  3:475744‑M2/1‑37 (MQ=255)

                                                                                                                tCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGAc                             >  4:694170/1‑148 (MQ=255)

                                                                                                                   aCGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCa                         >  3:365512/1‑149 (MQ=255)

                                                                                                                     gCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCaaa                       >  1:1175940/1‑149 (MQ=255)

                                                                                                                     gCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCaaa                       <  2:1228834/149‑1 (MQ=255)

                                                                                                                       cTGACGGCTACGCACGTAGCCCGATGGCGTggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcacgaggttgcagatctttc                     <  1:178151‑M2/149‑120 (MQ=255)

                                                                                                                       cTGACGGCTACGCACGTAGCCCGATGGCGTggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcacga                                    >  1:784209‑M2/1‑30 (MQ=255)

                                                                                                                       cTGACGGCTACGCACGTAGCCCGATGGCGTggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcacga                                    <  2:784209‑M2/134‑105 (MQ=255)

                                                                                                                       cTGACGGCTACGCACGTAGCCCGATGGCGAggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcacgaggttgcagatctttc                     <  2:907097‑M2/149‑120 (MQ=255)

                                                                                                                       cTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCAAaca                     >  3:802840/1‑149 (MQ=255)

                                                                                                                        tGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGt                                                                         >  1:1368300/1‑96 (MQ=255)

                                                                                                                        tGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGt                                                                         <  2:1368300/96‑1 (MQ=255)

                                                                                                                            ggCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCAAACACACCg                >  4:1322526/1‑149 (MQ=255)

                                                                                                                               tACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGtt                                                                        >  2:328838/1‑90 (MQ=255)

                                                                                                                               tACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGa                              <  2:1153793/132‑1 (MQ=255)

                                                                                                                               tACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGa                              >  1:1153793/1‑132 (MQ=255)

                                                                                                                               tACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCAAACACACCGTCg             >  2:1206948/1‑149 (MQ=255)

                                                                                                                                aCGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCAAACACACCGTCGc            <  3:775943/149‑1 (MQ=255)

                                                                                                                                   cACGTAGCCCGATGGCGAggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcacgaggttgcagatctttctgcagggcaata         >  1:1163548‑M2/1‑18 (MQ=255)

                                                                                                                                    aCGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAAc                                                >  3:756766/1‑109 (MQ=255)

                                                                                                                                    aCGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAAc                                                <  4:756766/109‑1 (MQ=255)

                                                                                                                                    aCGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCAAACACACCGTCGCCaaa        >  3:159536/1‑149 (MQ=255)

                                                                                                                                      gTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCAAACACACCGTCGCCaaa        <  1:517294/147‑1 (MQ=255)

                                                                                                                                      gTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCAAACACACCGTCGCCaaa        >  2:517294/1‑147 (MQ=255)

                                                                                                                                        aGCCCGATGGCGAggattttacggcagatgtatcagttaggcggtgagccgtttatgcaacaacaccagctggattaagcttcgcgcgaagtgagggccagcgttttgctctcacgaggttgcagatctttctgcagggcaatagccag    >  1:907097‑M2/1‑13 (MQ=255)

                                                                                                                                         gCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCAAACACACCGTCGCCAAATTCgg   <  4:365512/149‑1 (MQ=255)

                                                                                                                                          cccGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCAAACACGCGGTCGCCAAATTCgac  <  4:802840/149‑3 (MQ=255)

                                                                                                                                            cGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGt                                              >  1:172548/1‑103 (MQ=255)

                                                                                                                                                   gaggagACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGc                                         >  2:802004/1‑101 (MQ=255)

                                                                                                                                                   gaggagACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGc                                         <  1:802004/101‑1 (MQ=255)

GATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAATCCAGCTGGTGTTGTTGCATAAACGGCTCACCGCCTAACTGATACATCTGCCGTAAAATCCACGCCTGACGGCTACGCACGTAGCCCGATGGCGAGGAGACTTTGAAACGAAGTGGATTAGGTAATACAGCTGCCAGTAATGCAGCTTCCGACCGGGTAAGTTTGCTCGCGGGTTTGTGGAAATAACGTTGTGCCGCAGCTTCGACGCCAAACACACCGTCGCCAAATTCGGC  >  NC_000913/3349031‑3349317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.