BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3365284	149 (1.080)	12 (0.090)	11/214	NT	7.7%	pseudogene (100/367 nt)	yhcE	pseudogene fragment; interrupted by IS5
*	?	NC_000913	= 3365294	146 (1.120)	12 (0.090)	11/214	NT	7.7%	pseudogene (110/367 nt)	yhcE	pseudogene fragment; interrupted by IS5

Only 100 of 196 total aligned reads displayed.

GATGCACCAAAAGATGTGTTCTATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACGGATTTGGATT  >  NC_000913/3365138‑3365432

      ccAAAAGATGTGTTCTATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGt                                                                                                                                              <  4:1438785/149‑1 (MQ=255)

                tgtTCTATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCt                                                                                                                                           >  2:438737‑M2/1‑141 (MQ=255)

                tgtTCTATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCt                                                                                                                                           <  1:438737‑M2/142‑2 (MQ=255)

                     tATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCaa                                                                                                                               >  2:374281/1‑149 (MQ=255)

                     tATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTACTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCt                                                                                                                                           <  3:1341304‑M2/137‑2 (MQ=255)

                     tATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTACTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCt                                                                                                                                           >  4:1341304‑M2/1‑136 (MQ=255)

                      aTGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAg                                                                                                                              >  3:781368/1‑149 (MQ=255)

                       tGAGACAGCAACAGGAGAGTGCTAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGt                                                                                                                             >  3:550779/1‑149 (MQ=255)

                          gaCAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGa                                                                                                                          <  1:1013310/149‑1 (MQ=255)

                          gaCAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGa                                                                                                                          <  1:130918/149‑1 (MQ=255)

                            cAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCATGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGAcc                                                                                                                        <  4:267752/149‑1 (MQ=255)

                                aaCAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCgggg                                                                                                                    <  1:350703/149‑1 (MQ=255)

                                aaCAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCgggg                                                                                                                    >  3:1305157/1‑149 (MQ=255)

                                     gagaGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTaaaa                                                                                                               >  2:342387/1‑149 (MQ=255)

                                       gagTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAaaca                                                                                                             >  2:505703/1‑149 (MQ=255)

                                        agTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAaacaa                                                                                                            <  4:550779/149‑1 (MQ=255)

                                          tGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATgcgc                                                                                                                                  <  3:1133976/125‑1 (MQ=255)

                                            ccAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAaaca                                                                                                             >  2:834767/1‑144 (MQ=255)

                                             cAATGAAACGGATAATAACATGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACaa                                                                                                       <  1:919531/149‑1 (MQ=255)

                                              aaTGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGa                                                                                                                          >  3:1125803/1‑129 (MQ=255)

                                              aaTGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCggg                                                                                                                     <  1:760197/134‑1 (MQ=255)

                                              aaTGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCggg                                                                                                                     >  2:760197/1‑134 (MQ=255)

                                                 gAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAgcacttcgtttgccata                                                                                                                                     <  3:160410‑M1/115‑18 (MQ=255)

                                                  aaaCGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGc                                                                                                  <  2:1394189/149‑1 (MQ=255)

                                                    aCGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATgc                                                                                                                                    >  3:378388/1‑113 (MQ=255)

                                                    aCGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcag                                                                                                >  3:1383603/1‑149 (MQ=255)

                                                    aCGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcag                                                                                                >  4:743677/1‑149 (MQ=255)

                                                     cGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcaga                                                                                               <  4:1305157/149‑1 (MQ=255)

                                                       gATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcagaca                                                                                             <  4:781368/149‑1 (MQ=255)

                                                          aataaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGt                                                                                                                                              <  1:1095452/97‑1 (MQ=255)

                                                          aataaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGaa                                                                                          <  4:153741/149‑1 (MQ=255)

                                                          aataaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCGCAGCCAGAGTGTAATATCTCCACTAGCATACAAAATCTGGACTATGTCAAACGAAGTGCTGCCATGCACCAAGTTGATCGGGGTAAAACAACACTATTAGCAGACAGaa                                                                                          >  3:905013/1‑149 (MQ=255)

                                                           ataaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACaa                                                                                                       >  2:1418083/1‑135 (MQ=255)

                                                           ataaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACaa                                                                                                       <  1:1418083/135‑1 (MQ=255)

                                                           ataaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAAc                                                                                         >  4:527678/1‑149 (MQ=255)

                                                            taaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTaaaa                                                                                                               <  1:1215675/126‑1 (MQ=255)

                                                            taaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACa                                                                                        >  2:941193/1‑149 (MQ=255)

                                                             aaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGaa                                                                                                                                                <  2:856985/92‑1 (MQ=255)

                                                              aCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAAt                                                                                      <  4:1383603/149‑1 (MQ=255)

                                                                aGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCa                                                                                    >  2:586116/1‑149 (MQ=255)

                                                                 ggATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCaa                                                                                                                               <  2:257744/105‑1 (MQ=255)

                                                                 ggATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCaa                                                                                                                               >  1:257744/1‑105 (MQ=255)

                                                                 ggATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCAc                                                                                   <  1:1015020/149‑1 (MQ=255)

                                                                 ggATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCAc                                                                                   <  2:523894/149‑1 (MQ=255)

                                                                  gATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAaacaac                                                                                                           >  4:403528/1‑124 (MQ=255)

                                                                          ctgctgAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTaat                                                                          <  1:505703/149‑1 (MQ=255)

                                                                           tgctgAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCa                                                                                    <  3:497588/138‑1 (MQ=255)

                                                                            gctgAACTTCGTCATGGCCGCTCAGGCAGAGTGTGATATCTCCAGTAGCATACAAATTATCGACTATGGCAAACGAAGTCCTGCCATGCGCCAAGTTGACCGGGGTATAACAACACAATTAGCAGACAGAACAATCACGCTGGTaatgc                                                                        <  4:905013/149‑1 (MQ=255)

                                                                             ctgAACTTCGCCATAGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAacaaca                                                                                                          >  1:5822/1‑114 (MQ=255)

                                                                              tgAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGaa                                                                                          >  4:201040/1‑129 (MQ=255)

                                                                               gAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCt                                                                                <  4:1129340/138‑1 (MQ=255)

                                                                                aaCTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGc                                                                                                  <  3:193792/119‑1 (MQ=255)

                                                                                   ttCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAgcacttcgtttgccata                                                                                                                                     >  2:1036916‑M1/1‑64 (MQ=255)

                                                                                   ttCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCggg                                                                                                                     <  4:51313/97‑1 (MQ=255)

                                                                                   ttCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCggg                                                                                                                     >  3:51313/1‑97 (MQ=255)

                                                                                   ttCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTaaaa                                                                                                               >  2:789903/1‑103 (MQ=255)

                                                                                   ttCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTaaaa                                                                                                               <  1:789903/103‑1 (MQ=255)

                                                                                   ttCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCa                                                                                    >  2:1063052/1‑130 (MQ=255)

                                                                                     cGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATc                                                               <  3:527678/149‑1 (MQ=255)

                                                                                        cATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGAc                                                                                                                         >  3:229449/1‑88 (MQ=255)

                                                                                             ccGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCt                                                       <  3:1463928/149‑1 (MQ=255)

                                                                                              cGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTaatgcaat                                                                     >  4:375249/1‑134 (MQ=255)

                                                                                                    ggCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcaga                                                                                               >  1:983263/1‑102 (MQ=255)

                                                                                                     gCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCg                                               >  2:16911/1‑149 (MQ=255)

                                                                                                      cAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCgt                                              <  3:666946/149‑1 (MQ=255)

                                                                                                       agagTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAgcacttcgtttgc                                                                                                                                         >  1:56393‑M1/1‑44 (MQ=255)

                                                                                                       agagTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGc                                                        >  3:73983/1‑138 (MQ=255)

                                                                                                           tgtAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCAc                                                                                   >  1:726393/1‑107 (MQ=255)

                                                                                                           tgtAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCa                                         >  4:1041776/1‑149 (MQ=255)

                                                                                                            gtAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCa                                                              >  2:1246230/1‑127 (MQ=255)

                                                                                                               atatCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTg                                     >  2:1154212/1‑149 (MQ=255)

                                                                                                                tatCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGcc                                                                                                                                 >  4:868319/1‑56 (MQ=255)

                                                                                                                tatCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGcc                                                                                                                                 <  3:868319/56‑1 (MQ=255)

                                                                                                                 atCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGaa                                   <  1:16911/149‑1 (MQ=255)

                                                                                                                  tctcCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAg                                                             >  1:411378/1‑122 (MQ=255)

                                                                                                                  tctcCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAg                                                             <  2:411378/122‑1 (MQ=255)

                                                                                                                       aGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTaatgc                                                                        >  4:1074687/1‑106 (MQ=255)

                                                                                                                       aGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTaatgc                                                                        <  3:1074687/106‑1 (MQ=255)

                                                                                                                         tAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTa                           >  4:504783/1‑149 (MQ=255)

                                                                                                                           gCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAg                                                                                                   >  4:708529/1‑75 (MQ=255)

                                                                                                                              tACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGa                                                           <  2:658535/112‑1 (MQ=255)

                                                                                                                              tACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGa                                                           >  1:658535/1‑112 (MQ=255)

                                                                                                                                cAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTc                    <  1:374281/149‑1 (MQ=255)

                                                                                                                                 aaaaTATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAaacaa                                                                                                            >  2:722576/1‑60 (MQ=255)

                                                                                                                                 aaaaTATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAaacaa                                                                                                            <  1:722576/60‑1 (MQ=255)

                                                                                                                                         gACTATGGCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaagttcagcagcaggcatcctgttattatccgtttcattg                                      >  4:1312046‑M2/1‑20 (MQ=255)

                                                                                                                                         gACTATGGCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaagttcagcagcaggcatcctgttattatccgtttcattg                                      <  3:1312046‑M2/122‑103 (MQ=255)

                                                                                                                                          aCTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACgga          <  1:342044/149‑1 (MQ=255)

                                                                                                                                           cTATGGCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaagttcagcagcaggcatcctgttattatccgtttcattggcactctcctgttgctgtc                   <  1:470259‑M2/139‑122 (MQ=255)

                                                                                                                                           cTATGGCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaagttcagcagcaggcatcctgttattatccgtttcattggcactctcctgttgctgtc                   >  2:470259‑M2/1‑18 (MQ=255)

                                                                                                                                            tATGGCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaagttcagcagcaggcatcctgttattatccgtttc                                          >  4:160410‑M2/1‑17 (MQ=255)

                                                                                                                                            tATGGCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaa                                                                            <  1:1036916‑M2/81‑65 (MQ=255)

                                                                                                                                               ggCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaagttcagcagcaggcatcctgttattatccgtttcattggca                                   <  4:875284‑M2/119‑106 (MQ=255)

                                                                                                                                               ggCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaagttcagcagcaggcatcctgttattatccgtttcattggca                                   >  3:875284‑M2/1‑14 (MQ=255)

                                                                                                                                                gCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactct                                                                                                <  2:56393‑M2/57‑45 (MQ=255)

                                                                                                                                                 cAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATAcc                               >  1:843024/1‑121 (MQ=255)

                                                                                                                                                  aaaCGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCAc                                                                                   <  1:87198/68‑1 (MQ=255)

                                                                                                                                                  aaaCGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCAc                                                                                   >  2:87198/1‑68 (MQ=255)

                                                                                                                                                  aaaCGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAata                        <  4:1205235/127‑1 (MQ=255)

                                                                                                                                                  aaaCGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACggatttggatt  >  1:611583/1‑149 (MQ=255)

GATGCACCAAAAGATGTGTTCTATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACGGATTTGGATT  >  NC_000913/3365138‑3365432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.