BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3365284	149 (1.080)	12 (0.090)	11/214	NT	7.7%	pseudogene (100/367 nt)	yhcE	pseudogene fragment; interrupted by IS5
*	?	NC_000913	= 3365294	146 (1.120)	12 (0.090)	11/214	NT	7.7%	pseudogene (110/367 nt)	yhcE	pseudogene fragment; interrupted by IS5

Only 100 of 170 total aligned reads displayed.

TGTTCTATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACGGATTTGGATTTGGCCCGAAT  >  NC_000913/3365154‑3365442

tgtTCTATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCt                                                                                                                                                     >  2:438737‑M2/1‑141 (MQ=255)

     tATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCaa                                                                                                                                         >  2:374281/1‑149 (MQ=255)

     tATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCaa                                                                                                                                         <  1:31140/149‑1 (MQ=255)

     tATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTACTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCt                                                                                                                                                     <  3:1341304‑M2/137‑2 (MQ=255)

     tATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTACTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCt                                                                                                                                                     >  4:1341304‑M2/1‑136 (MQ=255)

      aTGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAg                                                                                                                                        >  3:781368/1‑149 (MQ=255)

        gagaCAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGtt                                                                                                                                      >  4:1463928/1‑149 (MQ=255)

          gaCAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGa                                                                                                                                    <  1:1013310/149‑1 (MQ=255)

            cAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCATGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGAcc                                                                                                                                  <  4:267752/149‑1 (MQ=255)

              gCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCgg                                                                                                                                >  2:1015020/1‑149 (MQ=255)

                     gagaGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTaaaa                                                                                                                         >  2:342387/1‑149 (MQ=255)

                          tGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATgcgc                                                                                                                                            <  3:1133976/125‑1 (MQ=255)

                           gCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAacac                                                                                                                   >  3:153741/1‑149 (MQ=255)

                            ccAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAaaca                                                                                                                       >  2:834767/1‑144 (MQ=255)

                              aaTGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGa                                                                                                                                    <  4:1125803/129‑1 (MQ=255)

                              aaTGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCggg                                                                                                                               <  1:760197/134‑1 (MQ=255)

                                  aaaCGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGc                                                                                                            <  2:1394189/149‑1 (MQ=255)

                                    aCGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATgc                                                                                                                                              >  3:378388/1‑113 (MQ=255)

                                    aCGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATgc                                                                                                                                              <  4:378388/113‑1 (MQ=255)

                                    aCGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcag                                                                                                          >  4:743677/1‑149 (MQ=255)

                                     cGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcaga                                                                                                         <  4:272976/149‑1 (MQ=255)

                                     cGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcaga                                                                                                         <  4:1305157/149‑1 (MQ=255)

                                       gATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcagaca                                                                                                       <  4:781368/149‑1 (MQ=255)

                                        ataataACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcaga                                                                                                         >  3:888930/1‑146 (MQ=255)

                                         taataaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcagacaga                                                                                                     >  4:666946/1‑149 (MQ=255)

                                          aataaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCGCAGCCAGAGTGTAATATCTCCACTAGCATACAAAATCTGGACTATGTCAAACGAAGTGCTGCCATGCACCAAGTTGATCGGGGTAAAACAACACTATTAGCAGACAGaa                                                                                                    >  3:905013/1‑149 (MQ=255)

                                            taaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTaaaa                                                                                                                         <  1:1215675/126‑1 (MQ=255)

                                            taaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACa                                                                                                  >  2:941193/1‑149 (MQ=255)

                                             aaCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACaa                                                                                                 >  2:772045/1‑149 (MQ=255)

                                              aCAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAAt                                                                                                <  4:1383603/149‑1 (MQ=255)

                                                aGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCa                                                                                              >  2:586116/1‑149 (MQ=255)

                                                 ggATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCaa                                                                                                                                         <  2:257744/105‑1 (MQ=255)

                                                 ggATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCAc                                                                                             <  2:523894/149‑1 (MQ=255)

                                                 ggATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCAc                                                                                             <  1:1015020/149‑1 (MQ=255)

                                                  gATGCCTGCTTCTGAACTTCGCCATGGCCGCTCAGGAAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAaacaac                                                                                                                     <  3:403528/124‑1 (MQ=255)

                                                         gctgctgAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTaa                                                                                     <  1:586116/149‑1 (MQ=255)

                                                           tgctgAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCa                                                                                              >  4:497588/1‑138 (MQ=255)

                                                           tgctgAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTaatg                                                                                   <  1:342387/149‑1 (MQ=255)

                                                           tgctgAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTaatg                                                                                   >  3:507289/1‑149 (MQ=255)

                                                            gctgAACTTCGTCATGGCCGCTCAGGCAGAGTGTGATATCTCCAGTAGCATACAAATTATCGACTATGGCAAACGAAGTCCTGCCATGCGCCAAGTTGACCGGGGTATAACAACACAATTAGCAGACAGAACAATCACGCTGGTaatgc                                                                                  <  4:905013/149‑1 (MQ=255)

                                                              tgAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGaa                                                                                                    >  4:201040/1‑129 (MQ=255)

                                                              tgAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTaatgcaa                                                                                <  1:941193/149‑1 (MQ=255)

                                                               gAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCt                                                                                          <  4:1129340/138‑1 (MQ=255)

                                                               gAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCt                                                                                          >  3:1129340/1‑138 (MQ=255)

                                                                aaCTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcagaca                                                                                                       >  2:665725/1‑124 (MQ=255)

                                                                aaCTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGc                                                                                                            >  4:193792/1‑119 (MQ=255)

                                                                aaCTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGc                                                                                                            <  3:193792/119‑1 (MQ=255)

                                                                 aCTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGt                                                                                       <  1:355079/139‑1 (MQ=255)

                                                                  cTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGGCCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCg                                                                            >  3:538931/1‑149 (MQ=255)

                                                                   ttCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCggg                                                                                                                               <  4:51313/97‑1 (MQ=255)

                                                                   ttCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTaaaa                                                                                                                         <  1:789903/103‑1 (MQ=255)

                                                                   ttCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTaaaa                                                                                                                         >  2:789903/1‑103 (MQ=255)

                                                                   ttCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCa                                                                                              <  1:1063052/130‑1 (MQ=255)

                                                                    tCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGGCCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGAt                                                                          <  4:538931/149‑1 (MQ=255)

                                                                     cGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATc                                                                         <  3:527678/149‑1 (MQ=255)

                                                                        cATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGAc                                                                                                                                   >  3:229449/1‑88 (MQ=255)

                                                                           ggCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTaatg                                                                                   <  2:150723/133‑1 (MQ=255)

                                                                           ggCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTaatg                                                                                   >  1:150723/1‑133 (MQ=255)

                                                                                    ggCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGcaga                                                                                                         <  2:983263/102‑1 (MQ=255)

                                                                                       agagTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGc                                                                  >  3:73983/1‑138 (MQ=255)

                                                                                           tgtAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCAc                                                                                             >  1:726393/1‑107 (MQ=255)

                                                                                           tgtAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCAc                                                                                             <  2:726393/107‑1 (MQ=255)

                                                                                           tgtAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCa                                                   >  4:1041776/1‑149 (MQ=255)

                                                                                           tgtAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCa                                                   >  4:818806/1‑149 (MQ=255)

                                                                                            gtAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCa                                                                        >  2:1246230/1‑127 (MQ=255)

                                                                                            gtAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCa                                                                        <  1:1246230/127‑1 (MQ=255)

                                                                                               atatCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTg                                               >  2:1154212/1‑149 (MQ=255)

                                                                                               atatCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTg                                               <  4:507289/149‑1 (MQ=255)

                                                                                                tatCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGcc                                                                                                                                           <  3:868319/56‑1 (MQ=255)

                                                                                                 atCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGaa                                             <  1:16911/149‑1 (MQ=255)

                                                                                                  tctcCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAg                                                                       >  1:411378/1‑122 (MQ=255)

                                                                                                    tcCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCgtgt                                                      >  1:140915/1‑137 (MQ=255)

                                                                                                    tcCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCgtgt                                                      <  2:140915/137‑1 (MQ=255)

                                                                                                           gCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAg                                                                                                             <  3:708529/75‑1 (MQ=255)

                                                                                                           gCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAg                                                                                                             >  4:708529/1‑75 (MQ=255)

                                                                                                              tACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGa                                                                     <  2:658535/112‑1 (MQ=255)

                                                                                                              tACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGa                                                                     >  1:658535/1‑112 (MQ=255)

                                                                                                                cAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTc                              <  2:392841/149‑1 (MQ=255)

                                                                                                                cAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTc                              <  1:374281/149‑1 (MQ=255)

                                                                                                                 aaaaTATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAaacaa                                                                                                                      <  1:722576/60‑1 (MQ=255)

                                                                                                                 aaaaTATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTcc                             >  3:572393/1‑149 (MQ=255)

                                                                                                                         gACTATGGCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaagttcagcagcaggcatcctgttattatccgtttcattg                                                <  3:1312046‑M2/122‑103 (MQ=255)

                                                                                                                           cTATGGCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaagttcagcagcaggcatcctgttattatccgtttcattggcactctcctgttgctgtc                             <  1:470259‑M2/139‑122 (MQ=255)

                                                                                                                            tATGGCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaagttcagcagcaggcatcctgttattatccgtttc                                                    >  4:160410‑M2/1‑17 (MQ=255)

                                                                                                                            tATGGCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaa                                                                                      >  2:1036916‑M2/1‑17 (MQ=255)

                                                                                                                               ggCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactctgcctgagcggccatggcgaagttcagcagcaggcatcctgttattatccgtttcattggca                                             <  4:875284‑M2/119‑106 (MQ=255)

                                                                                                                                gCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactct                                                                                                          >  1:56393‑M2/1‑13 (MQ=255)

                                                                                                                                gCAAACGAAGTGCtgccatagtcgatattttgtatgctactggagatattacactct                                                                                                          <  2:56393‑M2/57‑45 (MQ=255)

                                                                                                                                gCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGc                                                                                           >  2:498018/1‑72 (MQ=255)

                                                                                                                                gCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGc                                                                                           <  1:498018/72‑1 (MQ=255)

                                                                                                                                gCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAgg                                                                      >  3:140380/1‑93 (MQ=255)

                                                                                                                                gCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACggatttgga              >  3:1110001/1‑149 (MQ=255)

                                                                                                                                 cAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATAcc                                         >  1:843024/1‑121 (MQ=255)

                                                                                                                                  aaaCGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCAc                                                                                             >  2:87198/1‑68 (MQ=255)

                                                                                                                                  aaaCGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCAc                                                                                             <  1:87198/68‑1 (MQ=255)

                                                                                                                                  aaaCGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAata                                  <  4:1205235/127‑1 (MQ=255)

                                                                                                                                  aaaCGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACggatttggatt            >  1:611583/1‑149 (MQ=255)

                                                                                                                                  aaaCGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACggatttggatt            >  2:225267/1‑149 (MQ=255)

                                                                                                                                   aaCGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCaacaac                       <  3:195461/137‑1 (MQ=255)

                                                                                                                                            ctgcCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACGGATTTGGATTTGGCCCGAAt  <  3:1221070/149‑1 (MQ=255)

TGTTCTATGAGACAGCAACAGGAGAGTGCCAATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACGGATTTGGATTTGGCCCGAAT  >  NC_000913/3365154‑3365442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.