BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3670807 =	109 (0.790)	6 (0.050)	6/216	NT	5.5%	coding (1216/1650 nt)	treF	cytoplasmic trehalase
*	?	NC_000913	3670847 =	104 (0.790)	6 (0.050)	6/216	NT	5.5%	coding (1256/1650 nt)	treF	cytoplasmic trehalase

Only 100 of 128 total aligned reads displayed.

ACTGGAGAGCGCCATCGCCAACATCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGA  >  NC_000913/3670662‑3670949

gcccagccgttgggtttatcccactgttcaccggtttcgtactcgcttgccagaatcccgccaggtgtcagtaaccgactgcgcacggcgtttgccagacgatcggcctgttcatggttcgccataccgacatagagtggcacaaTGGc                                                                                                                                             <  3:554288‑M1/4‑1 (MQ=255)

     agagCGCCATCGCCAACATCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGAcgc                                                                                                                                        <  3:915358/149‑1 (MQ=255)

     agagCGCCATCGCCAACATCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGAGAcgc                                                                                                                                        <  1:137528/149‑1 (MQ=255)

           gggtttatcccactgttcaccggtttcgtactcgcttgccagaatcccgccaggtgtcagtaaccgactgcgcacggcgtttgccagacgatcggcctgttcatggttcgccataccgacatagagtggcacaaTGGCg                                                                                                                                            <  3:299981‑M1/5‑1 (MQ=255)

           gggtttatcccactgttcaccggtttcgtactcgcttgccagaatcccgccaggtgtcagtaaccgactgcgcacggcgtttgccagacgatcggcctgttcatggttcgccataccgacatagagtggcacaaTGGCg                                                                                                                                            >  4:299981‑M1/135‑139 (MQ=255)

                gCCAACATCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGaa                                                                                                                                     <  3:246802/141‑1 (MQ=255)

                gCCAACATCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGaa                                                                                                                                     >  4:246802/1‑141 (MQ=255)

                  cAACATCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGgcgc                                                                                                                           <  1:752855/149‑1 (MQ=255)

                  cAACATCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGgcgc                                                                                                                           >  4:474279/1‑149 (MQ=255)

                    aCATCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTg                                                                                                                         >  2:899242/1‑149 (MQ=255)

                      aTCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGTCTGGCGACGCGaac                                                                                                                                    <  1:1096951/136‑1 (MQ=255)

                      aTCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGaac                                                                                                                                    >  2:1096951/1‑136 (MQ=255)

                         tcGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGaacaa                                                                                                                                  >  2:1185091/1‑135 (MQ=255)

                         tcGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGaacaa                                                                                                                                  <  1:1185091/135‑1 (MQ=255)

                         tcGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTc                                                                                                                    >  3:149024/1‑149 (MQ=255)

                         gttcaccggtttcgtactcgcttgccagaatcccgccaggtgtcagtaaccgactgcgcacggcgtttgccagacgatcggcctgttcatggttcgccataccgacatagagtggcacaat                                                                                                                                                >  1:1313095‑M1/121‑121 (MQ=255)

                             accggtttcgtactcgcttgccagaatcccgccaggtgtcagtaaccgactgcgcacggcgtttgccagacgatcggcctgttcatggttcgccataccgacatagagtggcacaaTgg                                                                                                                                              <  2:1203677‑M1/3‑1 (MQ=255)

                             accggtttcgtactcgcttgccagaatcccgccaggtgtcagtaaccgactgcgcacggcgtttgccagacgatcggcctgttcatggttcgccataccgacatagagtggcacaaTgg                                                                                                                                              >  1:1203677‑M1/117‑119 (MQ=255)

                               cTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCt                                                                                                                >  4:1330508/1‑147 (MQ=255)

                               cTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCt                                                                                                                <  3:1330508/147‑1 (MQ=255)

                                  aaaGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTgccgc                                                                                                           >  4:669593/1‑149 (MQ=255)

                                       tactcgcttgccagaatcccgccaggtgtcagtaaccgactgcgcacggcgtttgccagacgatcggcctgttcatggttcgccataccgacatagagtggcacaaTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtg                                                                                                      <  4:841282‑M1/43‑1 (MQ=255)

                                        gagaAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtgt                                                                                                     >  4:1282794/1‑149 (MQ=255)

                                        gagaAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtgt                                                                                                     >  1:1038573/1‑149 (MQ=255)

                                        actcgcttgccagaatcccgccaggtgtcagtaaccgactgcgcacggcgtttgccagacgatcggcctgttcatggttcgccataccgacatagagtggcactaTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtgt                                                                                                     >  3:841282‑M1/106‑149 (MQ=255)

                                          tcgcttgccagaatcccgccaggtgtcagtaaccgactgcgcacggcgtttgccagacgatcggcctgttcatggttcgccataccgacatagagtggcacaaTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCAt                                                                                                        <  4:1127828‑M1/41‑1 (MQ=255)

                                          gaAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtgt                                                                                                     <  1:960925/147‑1 (MQ=255)

                                          gaAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtgt                                                                                                     >  2:960925/1‑147 (MQ=255)

                                          gaAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGc                                                                                                   >  1:1023240/1‑149 (MQ=255)

                                          gaAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACAGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGc                                                                                                   <  2:1121810/149‑1 (MQ=255)

                                           aaaGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGAcgc                                                                                                                                        <  3:845319/111‑1 (MQ=255)

                                           aaaGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGAcgc                                                                                                                                        >  4:845319/1‑111 (MQ=255)

                                              gagaCAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCAct                                                                                               >  3:380623/1‑149 (MQ=255)

                                                gaCAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACt                                                                                                                                                <  1:194209/98‑1 (MQ=255)

                                                gaCAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACt                                                                                                                                                >  2:194209/1‑98 (MQ=255)

                                                  cAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTAt                                                                                           <  4:149024/149‑1 (MQ=255)

                                                          cTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtg                                                                                                      >  1:1322698/1‑130 (MQ=255)

                                                          cTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtg                                                                                                      <  2:1322698/130‑1 (MQ=255)

                                                           tGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATg                                                                                  <  2:1023240/149‑1 (MQ=255)

                                                            gTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATgg                                                                                 <  4:729598/149‑1 (MQ=255)

                                                                cGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTcc                                                                                                                   >  4:188226/1‑111 (MQ=255)

                                                                cGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTcc                                                                                                                   <  3:188226/111‑1 (MQ=255)

                                                                cGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGaa                                                                             <  1:1100505/149‑1 (MQ=255)

                                                                 gCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAAc                                                                            >  2:1323643/1‑149 (MQ=255)

                                                                  gtcagtaaccgactgcgcacggcgtttgccagacgatcggcctgttcatggttcgccataccgacatagagtggcacaaTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtg                                                                                                      >  1:257672‑M1/80‑122 (MQ=255)

                                                                   cAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCa                                                                          <  3:1282794/149‑1 (MQ=255)

                                                                    aGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCAt                                                                         <  4:204172/149‑1 (MQ=255)

                                                                     gAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATg                                                                        >  4:640856/1‑149 (MQ=255)

                                                                      aaaGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGa                                                                       >  3:225341/1‑149 (MQ=255)

                                                                       aaGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGaa                                                                      <  1:926567/149‑1 (MQ=255)

                                                                       aaGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGaa                                                                      <  4:1340605/149‑1 (MQ=255)

                                                                         gCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACa                                                                    <  4:380623/149‑1 (MQ=255)

                                                                            aGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAAc                                                                            <  4:321455/138‑1 (MQ=255)

                                                                            aGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAAc                                                                            >  3:321455/1‑138 (MQ=255)

                                                                              tGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCg                                                               >  1:172255/1‑149 (MQ=255)

                                                                                    tCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTc                                                         <  3:640856/149‑1 (MQ=255)

                                                                                      gcgATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTg                                                       <  1:1323643/149‑1 (MQ=255)

                                                                                        gATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtgtg                                                                                                    >  1:271046/1‑102 (MQ=255)

                                                                                        gATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCCCGATTACGACTGGCGACGCGAACATCTGGCGCTGTTTTCCGCTGCCGCCATtgtg                                                                                                    <  2:271046/102‑1 (MQ=255)

                                                                                               tAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGcc                                              >  2:710971/1‑149 (MQ=255)

                                                                                                aaaCCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCAt                                                                                                        >  4:1030721/1‑90 (MQ=255)

                                                                                                aaaCCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCAt                                                                                                        <  3:1030721/90‑1 (MQ=255)

                                                                                                aaaCCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCg                                             <  2:172255/149‑1 (MQ=255)

                                                                                                 aaCCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGt                                            <  4:225341/149‑1 (MQ=255)

                                                                                                  aCCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTg                                           >  2:1155784/1‑149 (MQ=255)

                                                                                                   ccGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCAATCGTCTGGCAAACGCCGTgc                                          >  4:271121/1‑149 (MQ=255)

                                                                                                     gTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGc                                                                                                   <  3:171402/90‑1 (MQ=255)

                                                                                                     gTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGc                                                                                                   >  4:171402/1‑90 (MQ=255)

                                                                                                          ctctGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtg                                                                                                      >  3:24737/1‑82 (MQ=255)

                                                                                                          ctctGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtg                                                                                                      <  4:24737/82‑1 (MQ=255)

                                                                                                          ctctGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTg                                                       >  3:683316/1‑129 (MQ=255)

                                                                                                          ctctGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTg                                                       <  4:683316/129‑1 (MQ=255)

                                                                                                          ctctGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCg                                   >  3:1244652/1‑149 (MQ=255)

                                                                                                           tctGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTgc                                                                                                              <  2:1319422/73‑1 (MQ=255)

                                                                                                           tctGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCgg                                  <  2:1038573/149‑1 (MQ=255)

                                                                                                            ctGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTgg                                                      <  3:719969/128‑1 (MQ=255)

                                                                                                              gggATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGttt                                                                                                                      <  2:321728/62‑1 (MQ=255)

                                                                                                              gggATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGttt                                                                                                                      >  1:321728/1‑62 (MQ=255)

                                                                                                               ggATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTAc                              >  4:31969/1‑149 (MQ=255)

                                                                                                                  tgatgaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCAt                                                                         <  2:689437/103‑1 (MQ=255)

                                                                                                                  tgatgaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCAt                                                                         >  1:689437/1‑103 (MQ=255)

                                                                                                                     tgaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGtttt                                                                                                                     >  1:199669/1‑56 (MQ=255)

                                                                                                                     tgaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGtttt                                                                                                                     <  2:199669/56‑1 (MQ=255)

                                                                                                                     tgaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATtgtg                                                                                                    <  3:1149255/73‑1 (MQ=255)

                                                                                                                     tgaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGaa                                                                      <  2:672755/103‑1 (MQ=255)

                                                                                                                     tgaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGaa                                                                      >  1:672755/1‑103 (MQ=255)

                                                                                                                     tgaAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGacac                        <  1:899242/149‑1 (MQ=255)

                                                                                                                       aaaaCGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCt                      >  2:949697/1‑149 (MQ=255)

                                                                                                                         aaCGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTg                                                       <  3:1433668/114‑1 (MQ=255)

                                                                                                                         aaCGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTgg                    >  2:287219/1‑149 (MQ=255)

                                                                                                                         aaCGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTgg                    >  1:515396/1‑149 (MQ=255)

                                                                                                                           cGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCg                  <  3:31969/149‑1 (MQ=255)

                                                                                                                               aTCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGa               <  1:1451054/148‑1 (MQ=255)

                                                                                                                               aTCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGa               >  2:1451054/1‑148 (MQ=255)

                                                                                                                               aTCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGAt              >  3:546752/1‑149 (MQ=255)

                                                                                                                                  tACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCt           <  1:1155784/149‑1 (MQ=255)

                                                                                                                                   aCCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTg          <  4:1244652/149‑1 (MQ=255)

                                                                                                                                      gcgATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCa       >  4:406608/1‑149 (MQ=255)

                                                                                                                                          ttACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCg   >  4:649484/1‑149 (MQ=255)

                                                                                                                                          ttACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCg   >  1:500773/1‑149 (MQ=255)

ACTGGAGAGCGCCATCGCCAACATCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGA  >  NC_000913/3670662‑3670949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.