New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3811200 =164 (1.190)21 (0.170) 15/202 NT 15.5% intergenic (‑48/+50) mutM/rpmG formamidopyrimidine/5‑formyluracil/ 5‑hydroxymethyluracil DNA glycosylase/50S ribosomal subunit protein L33
?NC_000913 3811236 = 82 (0.670)intergenic (‑84/+14) mutM/rpmG formamidopyrimidine/5‑formyluracil/ 5‑hydroxymethyluracil DNA glycosylase/50S ribosomal subunit protein L33

Only 100 of 237 total aligned reads displayed.

CGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTAGATCACGTGCTGGCGAACAACTGGATCGAATTTTTTCAGTTCCAGTTTTTCCGGCTTAGTACG  >  NC_000913/3811052‑3811336
                                                                                                                                                    |                                                                                                                                        
tttcttctgctggtactggtcacttctataccactacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgt                                                                                                                                          >  3:764311‑M1/149‑149 (MQ=255)
cgcAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGAt                                                                                                                                          >  4:589332/1‑149 (MQ=255)
cgcAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGAt                                                                                                                                          <  4:1221470/149‑1 (MQ=255)
  cAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATaa                                                                                                                                        <  1:111290/149‑1 (MQ=255)
  cAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATaa                                                                                                                                        <  4:258602/149‑1 (MQ=255)
   aaGCGTCCGTTGCGCACCACTGCATGAAGAATGTTTGCACCAACGAGATGGGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATGCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAAc                                                                                                                                       >  1:6341/1‑149 (MQ=255)
   aaGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAAc                                                                                                                                       >  4:408045/1‑149 (MQ=255)
   aaGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAAc                                                                                                                                       >  4:1031352/1‑149 (MQ=255)
    ttctgctggtactggtcacttctataccactacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACa                                                                                                                                      <  2:543057‑M1/5‑1 (MQ=255)
    aGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACa                                                                                                                                      <  3:1009456/149‑1 (MQ=255)
     gCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACaa                                                                                                                                     >  2:1359066/1‑149 (MQ=255)
       gTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACaaaa                                                                                                                                   >  2:286960/1‑149 (MQ=255)
         ctggtactggtcacttctataccactacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAAc                                                                                                                                       <  4:1464115‑M1/4‑1 (MQ=255)
         ctggtactggtcacttctataccactacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAAc                                                                                                                                       >  3:1464115‑M1/140‑143 (MQ=255)
           ggtactggtcacttctataccactacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgt                                                                                                                                          >  4:1128396‑M1/138‑138 (MQ=255)
               cgcACCACTGCATGAAGAATTGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCccgc                                                                                                                           <  3:1031352/149‑1 (MQ=255)
                gcACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATaa                                                                                                                                        >  3:54967/1‑135 (MQ=255)
                    cacTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCtcgctccgg                                                                                                                      >  3:68605/1‑144 (MQ=255)
                     acttctataccactacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACa                                                                                                                                      <  1:68178‑M1/5‑1 (MQ=255)
                     acTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCtcgctccggc                                                                                                                     >  4:916698/1‑143 (MQ=255)
                      cttctataccactacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACaaaaaa                                                                                                                                 <  1:1133928‑M1/10‑1 (MQ=255)
                        gCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAg                                                                                                                  <  1:286960/149‑1 (MQ=255)
                          aTGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGt                                                                                                                <  1:711581/149‑1 (MQ=255)
                           tGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGtt                                                                                                               >  4:142588/1‑149 (MQ=255)
                            gaagaaTGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGttt                                                                                                              <  3:706858/149‑1 (MQ=255)
                            gaagaaTGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGttt                                                                                                              <  3:1437779/149‑1 (MQ=255)
                             aagaaTGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGtttt                                                                                                             <  3:142588/149‑1 (MQ=255)
                              agaaTGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGAt                                                                                                                                          <  3:1122987/119‑1 (MQ=255)
                              agaaTGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGttttt                                                                                                            <  1:1359066/149‑1 (MQ=255)
                                aaTGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTg                                                                                                          <  1:841546/149‑1 (MQ=255)
                                 aTGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGACCAGATGCAGTCAATATGGGGGCAAGCAGATaa                                                                                                                                        <  2:577668/118‑1 (MQ=255)
                                 aTGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGt                                                                                                         <  3:346336/149‑1 (MQ=255)
                                  tacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACaaaaaa                                                                                                                                 <  2:1322235‑M1/10‑1 (MQ=255)
                                  tacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCg                                                                                                                    <  3:17382‑M1/23‑1 (MQ=255)
                                  tacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCg                                                                                                                    >  4:17382‑M1/115‑137 (MQ=255)
                                  tacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCGAGGttt                                                                                                              >  2:1211206‑M1/115‑143 (MQ=255)
                                  tacgaagaacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCGAGGttt                                                                                                              <  1:1211206‑M1/29‑1 (MQ=255)
                                  tGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGtt                                                                                                        <  4:353103/149‑1 (MQ=255)
                                     ttGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACa                                                                                                     >  2:1458228/1‑149 (MQ=255)
                                        cACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGtt                                                                                                        <  2:891275/143‑1 (MQ=255)
                                        cACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGt                                                                                                         >  3:80663/1‑142 (MQ=255)
                                        cACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCa                                                                                                  >  2:702186/1‑149 (MQ=255)
                                         aacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCGAGGtttttt                                                                                                           >  3:368248‑M1/108‑139 (MQ=255)
                                         aacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCGAGGtttttt                                                                                                           <  4:368248‑M1/32‑1 (MQ=255)
                                         aacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCGAGGt                                                                                                                <  3:1451393‑M1/27‑1 (MQ=255)
                                         aacaaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCGAGGt                                                                                                                >  4:1451393‑M1/108‑134 (MQ=255)
                                           caaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACaaaaaa                                                                                                                                 <  4:770949‑M1/10‑1 (MQ=255)
                                           cAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACaaaaaa                                                                                                                                 >  3:965931/1‑115 (MQ=255)
                                           cAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAg                                                                                               >  2:1005564/1‑149 (MQ=255)
                                            aaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaagaattctcgctttgatgTAAc                                                                                                                                       >  3:876855‑M1/105‑108 (MQ=255)
                                            aaacgtactaagccggaaaaactggaactgaaaaaattcgatccagttgttagccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCGAGGtt                                                                                                               <  2:958874‑M1/28‑1 (MQ=255)
                                              cGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGTGTAATTCAGGCATAGCATCTCCAGGAATGAACAGCTGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCga                                                                                            <  4:1199716/149‑1 (MQ=255)
                                               gagaTGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACa                                                                                                     >  1:91197/1‑139 (MQ=255)
                                                 gaTGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGtttt                                                                                                             <  4:755308/129‑1 (MQ=255)
                                                 gaTGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGtttt                                                                                                             >  3:755308/1‑129 (MQ=255)
                                                           tATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACa                                                                                                     <  1:1164267/127‑1 (MQ=255)
                                                           tATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACa                                                                                                     >  2:1164267/1‑127 (MQ=255)
                                                             tGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATaa                                                                                                                                        <  2:867055/90‑1 (MQ=255)
                                                                  tggaactgaaaaaattcgatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTa                                                                                                                                         >  3:1180944‑M1/83‑84 (MQ=255)
                                                                      ggcTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTGCttt                                                                    >  2:141407/1‑149 (MQ=255)
                                                                        cTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGt                                                                  <  1:1005564/149‑1 (MQ=255)
                                                                           gTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGa                                                                                                                       >  4:630698/1‑93 (MQ=255)
                                                                           gTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGa                                                                                                                       <  3:630698/93‑1 (MQ=255)
                                                                            tttCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTa                                                                 >  1:590648/1‑146 (MQ=255)
                                                                                  cTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGtttttt                                                                                                           <  1:315962/98‑1 (MQ=255)
                                                                                  cTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAattatt                                                                                    >  2:841643/1‑121 (MQ=255)
                                                                                   ttCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTAGATCACGTGc                                                       >  2:614486/1‑149 (MQ=255)
                                                                                   gatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAAc                                                                                                                                <  3:490141‑M1/11‑1 (MQ=255)
                                                                                   gatccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAAc                                                                                                                                >  4:490141‑M1/66‑76 (MQ=255)
                                                                                     tccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCGAGGtt                                                                                                               <  3:1324827‑M1/28‑1 (MQ=255)
                                                                                     tccagttgttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCGAGGtt                                                                                                               >  4:1324827‑M1/64‑91 (MQ=255)
                                                                                       ggTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAattatt                                                                                    >  3:40917/1‑116 (MQ=255)
                                                                                         tAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCga                                                                          <  1:88549/124‑2 (MQ=255)
                                                                                          aaTTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGtt                                                                                                        >  1:1319626/1‑93 (MQ=255)
                                                                                            gttcgccagcacgtgatctacaaagaagcgaaaatcaaataattctcgctttgatgTAACAAAAAACCCCGCCGGAGCGAGGtt                                                                                                               >  1:52841‑M1/57‑84 (MQ=255)
                                                                                              cAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTAGAt                                                              <  2:45424/131‑1 (MQ=255)
                                                                                              cAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTAGAt                                                              >  1:45424/1‑131 (MQ=255)
                                                                                                 gCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTAc                                                                                                      >  1:609323/1‑88 (MQ=255)
                                                                                                   aTAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGAAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTAGATCACGTGCTGGCGAACAACTGGAt                                       <  1:141407/149‑1 (MQ=255)
                                                                                                      gCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTAttt                                                                                   >  4:824434/1‑102 (MQ=255)
                                                                                                      gCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTa                                                                 <  2:348429/120‑1 (MQ=255)
                                                                                                             cAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGtttttt                                                                                                           <  1:1452088/71‑1 (MQ=255)
                                                                                                             cAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGtt                                                                                                               <  1:253872/67‑1 (MQ=255)
                                                                                                             cAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGtt                                                                                                               >  2:253872/1‑67 (MQ=255)
                                                                                                             cAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTAGATCACGTGc                                                       <  4:1112302/123‑1 (MQ=255)
                                                                                                             cAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTAGATCACGTGc                                                       >  3:1112302/1‑123 (MQ=255)
                                                                                                              aGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGAt                                                                                                                                          >  3:1226570/1‑39 (MQ=255)
                                                                                                              aGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTAGATCACGTGCTGGCGAACAACTGGAt                                       <  4:1061519/138‑1 (MQ=255)
                                                                                                               ggAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAg                                                                                                                  >  2:156554/1‑62 (MQ=255)
                                                                                                               ggAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAg                                                                                                                  <  1:156554/62‑1 (MQ=255)
                                                                                                               ggAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTGGCTTTTCGCTTCTTTGTAGATCACGTGCTGGCGAACACCTGGATCGAATTTTTTCa                           <  2:6341/149‑1 (MQ=255)
                                                                                                                 aaTGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGt                                                                  >  1:576844/1‑108 (MQ=255)
                                                                                                                     aaCAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGa                                                                                                                   <  2:146687/55‑1 (MQ=255)
                                                                                                                     aaCAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGa                                                                                                                   >  1:146687/1‑55 (MQ=255)
                                                                                                                      aCAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGtttt                                                                                                             >  4:277254/1‑60 (MQ=255)
                                                                                                                        aGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGc                                                                          >  4:698411/1‑93 (MQ=255)
                                                                                                                               gTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGcttct                                                                      <  2:597009/90‑1 (MQ=255)
                                                                                                                                      tGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAattatt                                                                                    >  3:213763/1‑69 (MQ=255)
                                                                                                                                        ggggCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTAGATCACGTGCTGGCGAACAACTGGATCGAATTTTTTCAGTTCCAGTTTTTCCGGCTTAGTACg  >  2:1125704/1‑149 (MQ=255)
                                                                                                                                         gggCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTAGATCACGTGCTGGCGAACAACTGGAt                                       >  1:850465/1‑111 (MQ=255)
                                                                                                                                                    |                                                                                                                                        
CGCAAGCGTCCGTTGCGCACCACTGCATGAAGAATGGTTGCACCAACGAGATGCGGTTCTATGCCGCGGCGGCTGGTTTCAACTTCGGGTAATTCAGGCATAGCATCTCCAGGAATGAACAGATGCAGTCAATATGGGGGCAAGCAGATAACAAAAAACCCCGCCGGAGCGAGGTTTTTTGTTACATCAAAGCGAGAATTATTTGATTTTCGCTTCTTTGTAGATCACGTGCTGGCGAACAACTGGATCGAATTTTTTCAGTTCCAGTTTTTCCGGCTTAGTACG  >  NC_000913/3811052‑3811336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.