New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3718303 =	39 (0.280)	6 (0.050)	6/208	NT	14.3%	intergenic (+19/+31)	ghrB/yiaF	glyoxylate/hydroxypyruvate reductase B/barrier effect co‑colonization resistance factor; DUF3053 family lipoprotein
	?	NC_000913	3718328 =	36 (0.280)					intergenic (+44/+6)	ghrB/yiaF	glyoxylate/hydroxypyruvate reductase B/barrier effect co‑colonization resistance factor; DUF3053 family lipoprotein

ATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTGCGACAAAGCTCACCTGA  >  NC_000913/3718181‑3718475                                                                                                                                                    |                                                                                                                                                    aTGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTa                                                                                                                                                    >  2:218778/1‑149 (MQ=255)      aCGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTAc                                                                                                                                                   >  1:254492/1‑145 (MQ=255)      aCGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTAc                                                                                                                                                   <  2:254492/145‑1 (MQ=255)      aCGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCtt                                                                                                                                               >  4:1192957/1‑149 (MQ=255)           ttATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTg                                                                                                                                          <  3:1192957/149‑1 (MQ=255)                     gccgccTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTggg                                                                                                                                        >  2:1334898/1‑141 (MQ=255)                     gccgccTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTggg                                                                                                                                        <  1:1334898/141‑1 (MQ=255)                       cgccTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAAc                                                                                                                              <  1:218778/149‑1 (MQ=255)                                    gATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAg                                                                                                                 <  4:335495/149‑1 (MQ=255)                                                           aGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAActgctg                                                                                                                         <  4:1148490/118‑1 (MQ=255)                                                           aGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAActgctg                                                                                                                         >  3:1148490/1‑118 (MQ=255)                                                            ggAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAAc                                                                                                                              <  4:33157/112‑1 (MQ=255)                                                            ggAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAAc                                                                                                                              >  3:33157/1‑112 (MQ=255)                                                                  gTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGAt                                                                                              >  2:585111/1‑138 (MQ=255)                                                                  gTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGAt                                                                                              <  1:585111/138‑1 (MQ=255)                                                                     gagaAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTggg                                                                                                                                        <  2:1056649/93‑1 (MQ=255)                                                                     gagaAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTggg                                                                                                                                        >  1:1056649/1‑93 (MQ=255)                                                                       gaagaaCTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTAc                                                                                                                                                   >  1:1402331/1‑80 (MQ=255)                                                                       gaagaaCTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTAc                                                                                                                                                   <  2:1402331/80‑1 (MQ=255)                                                                          gaaCTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGgcgc                                                                           >  3:297319/1‑149 (MQ=255)                                                                           tttaatcaggcctggactacagcagttactgcaacccaataaagagtaAA‑GCCCGATAATCGCTCGGGCTTTTACTCTTTATTggg                                                                                                                                        >  1:1178628‑M1/49‑86 (MQ=255)                                                                           tttaatcaggcctggactacagcagttactgcaacccaataaagagtaAA‑GCCCGATAATCGCTCGGGCTTTTACTCTTTATTggg                                                                                                                                        <  2:1178628‑M1/38‑1 (MQ=255)                                                                                      tCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGtt                                                               <  4:297319/149‑1 (MQ=255)                                                                                         gCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTaa                                                                                                       <  4:323547/106‑1 (MQ=255)                                                                                         gCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTaa                                                                                                       >  3:323547/1‑106 (MQ=255)                                                                                         gCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGc                                                                                                   >  3:1314991/1‑110 (MQ=255)                                                                                         gCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGc                                                                                                   <  4:1314991/110‑1 (MQ=255)                                                                                              tctcgGACTATTCCGCTATTTCTTAGATTAAAGCCAGCTAATTGCTCGGGTTTTTACTCATTATTTTGTTCTAGTAACTTCTGGAGTCCATGTCTTATTAAACGCCTGATGCTGTGCCGATAATGGCGCAATCAGTTTGTTATATTCAc                                                       <  4:1204084/146‑1 (MQ=255)                                                                                              tCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTggg                                                                                                                                        <  1:1151162/68‑1 (MQ=255)                                                                                              tCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTggg                                                                                                                                        >  2:1151162/1‑68 (MQ=255)                                                                                                gcagttactgcaacccaataaagagtaAAAGCCCGATAATCGCTCGGGCTTTTa                                                                                                                                                    >  2:1105359‑M1/28‑54 (MQ=255)                                                                                                gcagttactgcaacccaataaagagtaAAAGCCCGATAATCGCTCGGGCTTTTa                                                                                                                                                    <  1:1105359‑M1/27‑1 (MQ=255)                                                                                                  ggACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACtaga                                                   >  3:1204084/1‑146 (MQ=255)                                                                                                            gcgACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGc                                                                                                   >  3:452220/1‑91 (MQ=255)                                                                                                            gcgACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGc                                                                                                   <  4:452220/91‑1 (MQ=255)                                                                                                              cccaataaagagtaaaagcccgagcgattatcgggcttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTaaa                                                                                                      <  2:1178628‑M2/48‑1 (MQ=255)                                                                                                              cccaataaagagtaaaagcccgagcgattatcgggcttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTaaa                                                                                                      >  1:1178628‑M2/39‑86 (MQ=255)                                                                                                               aCTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATg                                                                               >  1:1466800/1‑108 (MQ=255)                                                                                                               aCTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATg                                                                               <  2:1466800/108‑1 (MQ=255)                                                                                                                        agTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCctgct                                              >  3:569552/1‑132 (MQ=255)                                                                                                                        agTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCctgct                                              <  4:569552/132‑1 (MQ=255)                                                                                                                         taaaagcccgagcgattatcgggctttTACTCTTTATTGGGTTGCAGTAActgc                                                                                                                           <  1:1105359‑M2/27‑1 (MQ=255)                                                                                                                         taaaagcccgagcgattatcgggctttTACTCTTTATTGGGTTGCAGTAActgc                                                                                                                           >  2:1105359‑M2/28‑54 (MQ=255)                                                                                                                         gTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTc                                      <  4:1388341/139‑1 (MQ=255)                                                                                                                         gTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTc                                      >  3:1388341/1‑139 (MQ=255)                                                                                                                         gTAAAGCCCGATAATCGCTCGGGCTTTTACTCTCTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTTAAGTCGGGAACTGGa                            >  1:833019/1‑149 (MQ=255)                                                                                                                          tAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGAt                           <  1:105015/149‑1 (MQ=255)                                                                                                                          tAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGAt                           <  2:833019/149‑1 (MQ=255)                                                                                                                          tAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGAt                           >  2:105015/1‑149 (MQ=255)                                                                                                                           AAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCtgt                                            >  2:746483‑M1/1‑131 (MQ=255)                                                                                                                           AAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCtgt                                            <  1:746483‑M1/131‑1 (MQ=255)                                                                                                                            aagcccgagcgattatcgggctttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGc                                                                                                   <  3:697745‑M2/51‑1 (MQ=255)                                                                                                                            aagcccgagcgattatcgggctttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGc                                                                                                   >  4:697745‑M2/25‑75 (MQ=255)                                                                                                                            AAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCt                                                                                                 >  1:1142940‑M1/1‑77 (MQ=255)                                                                                                                            AAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCt                                                                                                 <  2:1142940‑M1/77‑1 (MQ=255)                                                                                                                             AGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCaa                                                                         >  1:986506‑M1/1‑100 (MQ=255)                                                                                                                             AGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCaa                                                                         <  2:986506‑M1/100‑1 (MQ=255)                                                                                                                             AGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGcc                        <  2:1250382‑M1/149‑1 (MQ=255)                                                                                                                              GCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCaggccaga                                                                                                           <  1:112816‑M1/65‑4 (MQ=255)                                                                                                                              GCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGa                                                                                                           >  2:112816‑M1/1‑65 (MQ=255)                                                                                                                               CCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCAt                      <  4:962057‑M1/149‑1 (MQ=255)                                                                                                                               CCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTCGCCTGCTGTGAAGTCGGGAACTGGATGCCAt                      <  2:906912‑M1/149‑1 (MQ=255)                                                                                                                                CCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGtt                                                                   <  2:1426403‑M1/103‑1 (MQ=255)                                                                                                                                CCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGtt                                                                   >  1:1426403‑M1/1‑103 (MQ=255)                                                                                                                                CCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCAtt                     <  1:1426830‑M1/149‑1 (MQ=255)                                                                                                                                CCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCAtt                     <  2:921741‑M1/149‑1 (MQ=255)                                                                                                                                  GATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGttt                                                                  <  4:990963‑M1/102‑1 (MQ=255)                                                                                                                                  GATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGttt                                                                  >  3:990963‑M1/1‑102 (MQ=255)                                                                                                                                  GATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTg                   <  1:98199‑M1/149‑1 (MQ=255)                                                                                                                                           tcgggctttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGAt                           <  4:1195057‑M2/123‑1 (MQ=255)                                                                                                                                           tcgggctttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGAt                           >  3:1195057‑M2/10‑132 (MQ=255)                                                                                                                                               gctttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTGCGACAAAGCTCAc      >  1:156454‑M2/6‑149 (MQ=255)                                                                                                                                                ctttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTGCGACAAAGCTCAcc     >  3:530662‑M2/5‑149 (MQ=255)                                                                                                                                                 tttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCtgt                                            <  4:1358835‑M2/106‑1 (MQ=255)                                                                                                                                                 tttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCtgt                                            >  3:1358835‑M2/4‑109 (MQ=255)                                                                                                                                                 tttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGa                                          <  3:82335‑M2/108‑1 (MQ=255)                                                                                                                                                 tttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGa                                          >  4:82335‑M2/4‑111 (MQ=255)                                                                                                                                                 tttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTGCGACAAAGCt         <  3:1293624‑M2/141‑1 (MQ=255)                                                                                                                                                 tttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTGCGACAAAGCt         >  4:1293624‑M2/4‑144 (MQ=255)                                                                                                                                                 tttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTGCGACAAAGCTCa       <  2:728754‑M2/143‑1 (MQ=255)                                                                                                                                                 tttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTGCGACAAAGCTCa       >  1:728754‑M2/4‑146 (MQ=255)                                                                                                                                                 tttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTGCGACAAAGCTCACCt    >  3:786923‑M2/4‑149 (MQ=255)                                                                                                                                                 tttTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTGCGACAAAGCTCACCt    <  1:1250382‑M2/146‑1 (MQ=255)                                                                                                                                                   tTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTGCGACAAAGCTCACCTGa  >  2:1287469‑M2/2‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    ATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAAGCCGCGACTGCGTAGAGTAAAGCCCGATAATCGCTCGGGCTTTTACTCTTTATTGGGTTGCAGTAACTGCTGTAGTCCAGGCCTGATTAAACGCCTGATGCTGTGCCGGTAATGGCGCAATCAGTTTGTTATATTCACTTGCCTGCTGTGAAGTCGGGAACTGGATGCCATTTGCGACAAAGCTCACCTGA  >  NC_000913/3718181‑3718475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.