| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3473551 | 118 (1.190) | 6 (0.060) | 6/256 | NT | 5.0% | coding (531/540 nt) | rpsG | 30S ribosomal subunit protein S7 |
| ? | NC_000913 | = 3473568 | 113 (1.180) | coding (514/540 nt) | rpsG | 30S ribosomal subunit protein S7 | |||||
TATGGTTTACACCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3473400‑3473551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taagCAGCCCGCTTTGGGCTACTTAAATTGAACGCCTAAAAGATAAACGAGGAAACAAATGGCTCGTACAACACCCATCGCACGCTACCGTAACATCGGTATCAGTGCGCACATCGACGCCGGTAAAACCACTACTACCGAACGTATTCT < NC_000913/3473568‑3473423 TATGGTTTACACCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTT < 2:243379/149‑1 TGGTTTACACCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAA < 3:882426/149‑1 TGGTTTACACCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAA < 4:162960/149‑1 TGGTTTACACCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAA > 4:432695/1‑149 AATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGCAGCCCGCTTTGGGCTACTTAA < 3:747392/149‑1 ACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGCAGCCCGCTTTGGGCTACTTAAATTGAAC < 3:551716/114‑1 ACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGCAGCCCGCTTTGGGCTACTTAAATTGAAC > 4:551716/1‑114 CGATGTTACGGTAGCGTGCGATGGGCGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGCAGCCCGCTTTGGGCTACTTAAA < 3:166045/100‑1 CGATGTTACGGTAGCGTGCGATGGGCGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGCAGCCCGCTTTGGGCTACTTAAA > 4:166045/1‑100 CCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTAAATTGAACGCCTAAAAGATAAACGAGGAAACAAATGGCTCGTACAACACCCATCGCACGCTACCGTAACATCGGTATCAGTGCGCACATCGACGCCG > 1:281906/1‑149 AAGCAGCCCGCTTTGGGCTACTTAAATTGAACGCCTAAAAGATAAACGAGGAAACAAATGGCTCGTACAACACCCATCGCACGCTACCGTAACATCGGTATCAGTGCGCACATCGACGCCGGTAAAACCACTACTCCCGAACGTATTCT < 2:547562/149‑1 AAGCAGCCCGCTTTGGGCTACTTAAATTGAACGCCTAAAAGATAAACGAGGAAACAAATGGCTCGTACAACACCCATCGCACGCTACCGTAACATCGGTATCAGTGCGCACATCGACGCCGGTAAAACCACTACTACCGAACGTATTCT < 3:521093/149‑1 TATGGTTTACACCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3473400‑3473551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taagCAGCCCGCTTTGGGCTACTTAAATTGAACGCCTAAAAGATAAACGAGGAAACAAATGGCTCGTACAACACCCATCGCACGCTACCGTAACATCGGTATCAGTGCGCACATCGACGCCGGTAAAACCACTACTACCGAACGTATTCT < NC_000913/3473568‑3473423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |