BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3473551	118 (1.190)	6 (0.060)	6/256	NT	5.0%	coding (531/540 nt)	rpsG	30S ribosomal subunit protein S7
*	?	NC_000913	= 3473568	113 (1.180)	6 (0.060)	6/256	NT	5.0%	coding (514/540 nt)	rpsG	30S ribosomal subunit protein S7

Only 100 of 145 total aligned reads displayed.

GTTTACACCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCTTTGTTTTCT  >  NC_000913/3473404‑3473698

gTTTACACCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGt                                                                                                                                                    >  2:483933/1‑149 (MQ=255)

     cacCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGccc                                                                                                                                               >  3:404922/1‑149 (MQ=255)

      acCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGcc                                                                                                                                                <  2:775446/147‑1 (MQ=255)

      acCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGcc                                                                                                                                                >  1:775446/1‑147 (MQ=255)

      acCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCa                                                                                                                                              >  3:68502/1‑149 (MQ=255)

      acCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCa                                                                                                                                              >  3:337510/1‑149 (MQ=255)

           tgtAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCg                                                                                                                                         <  3:490096/149‑1 (MQ=255)

            gtAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCgg                                                                                                                                        <  2:456392/149‑1 (MQ=255)

             tAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCggg                                                                                                                                       >  1:362257/1‑149 (MQ=255)

             tAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCggg                                                                                                                                       >  1:22173/1‑149 (MQ=255)

                aaCAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGgctg                                                                                                                                    >  1:532119/1‑149 (MQ=255)

                   aGAATACGTTCGGGAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGctt                                                                                                                                 <  2:547562‑M2/149‑4 (MQ=255)

                     aaTACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTAc                                                                                                                               <  2:171289/149‑1 (MQ=255)

                      aTACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCCTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACt                                                                                                                              >  1:306914/1‑149 (MQ=255)

                         cGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGa                                                                                                                           >  2:166752/1‑149 (MQ=255)

                          gTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCATACTGGaa                                                                                                                          <  4:76852/149‑1 (MQ=255)

                             cGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTgg                                                                                                                            <  4:659089/144‑1 (MQ=255)

                             cGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTgg                                                                                                                            >  3:659089/1‑144 (MQ=255)

                              ggTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAgcgc                                                                                                                      <  1:453840/149‑1 (MQ=255)

                               gtagtaGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCaaa                                                                                                                                            <  3:878964/126‑1 (MQ=255)

                                tagtagTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGcgccc                                                                                                                    >  2:77865/1‑149 (MQ=255)

                                       ggTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGt                                                                                                             <  2:70073/149‑1 (MQ=255)

                                       ggTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGt                                                                                                             <  4:481145/149‑1 (MQ=255)

                                          tttACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGAc                                                                                                          <  4:231910/149‑1 (MQ=255)

                                           ttACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACt                                                                                                         <  4:404922/149‑1 (MQ=255)

                                               cGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTaaaa                                                                                                     >  3:750377/1‑149 (MQ=255)

                                               cGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTaaaa                                                                                                     >  4:873402/1‑149 (MQ=255)

                                               cGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGCAGCCCGCTTTGGGCTActtaaattgaacgcctaaaagataaacgagg                                                                                                     >  1:281906‑M2/1‑118 (MQ=255)

                                                ggCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAAc                                                                                                    >  3:781385/1‑149 (MQ=255)

                                                      gATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGaa                                                                                              <  1:484373/149‑1 (MQ=255)

                                                            cgcACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATa                                                                                        <  4:298532/149‑1 (MQ=255)

                                                             gcACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATaa                                                                                       <  2:362257/149‑1 (MQ=255)

                                                             gcACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATaa                                                                                       <  1:574701/149‑1 (MQ=255)

                                                               aCTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGcagcccgctttgggctacttaaattgaac                                                                                                                        <  3:551716‑M1/114‑30 (MQ=255)

                                                                 tGATAGCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTATCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCaa                                                                                   <  1:29724/149‑1 (MQ=255)

                                                                 tGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCaa                                                                                   <  2:491640/149‑1 (MQ=255)

                                                                 tGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCCTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCaa                                                                                   <  2:306914/149‑1 (MQ=255)

                                                                   aTACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGTCTAAAACTCCGAAGGGATAACCAACg                                                                                 <  4:337510/149‑1 (MQ=255)

                                                                    tACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACgg                                                                                <  2:574420/149‑1 (MQ=255)

                                                                      ccGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTa                                                                              <  4:681117/149‑1 (MQ=255)

                                                                       cGATGTTACGGTAGCGTGCGATGGGCGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGcagcccgctttgggctacttaaa                                                                                                                              >  4:166045‑M1/1‑77 (MQ=255)

                                                                       cGATGTTACGGTAGCGTGCGATGGGCGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGcagcccgctttgggctacttaaa                                                                                                                              <  3:166045‑M1/100‑24 (MQ=255)

                                                                            ttACGGTAGCGTGCGATGGGTGTTGTGCGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGc                                                                        <  4:523737/149‑1 (MQ=255)

                                                                            ttACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGc                                                                        <  3:606942/149‑1 (MQ=255)

                                                                                  tAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGc                                                                  >  4:32863/1‑149 (MQ=255)

                                                                                       tGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCttgt                                                             <  1:117291/149‑1 (MQ=255)

                                                                                        gCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCttgtt                                                            <  3:432695/149‑1 (MQ=255)

                                                                                             gggTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCtt                                                       <  4:750377/149‑1 (MQ=255)

                                                                                              ggTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTc                                                      <  1:293188/149‑1 (MQ=255)

                                                                                              ggTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTc                                                      <  1:509721/149‑1 (MQ=255)

                                                                                                tgttgtACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCgg                                                    <  2:532119/149‑1 (MQ=255)

                                                                                                  ttgtACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGcc                                                  <  2:247903/149‑1 (MQ=255)

                                                                                                         aGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGt                                           >  1:587884/1‑149 (MQ=255)

                                                                                                           ccATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGa                                         >  2:112119/1‑149 (MQ=255)

                                                                                                             aTTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAAc                                       <  1:111365/149‑1 (MQ=255)

                                                                                                             aTTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAAc                                       >  4:720649/1‑149 (MQ=255)

                                                                                                                tGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTc                                    <  1:782733/149‑1 (MQ=255)

                                                                                                                 ttttCCTCGTTTATCTTTTAGGCGTTCTATGTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTTACTAACACTCCGAAGGGATAACCAACGGTAGTGTGCGAAGGCCTTGTTGGCTTCGGCCATACGGTGAACGTCt                                   <  1:730673/148‑1 (MQ=255)

                                                                                                                 gTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGc                                                         <  4:343305/127‑1 (MQ=255)

                                                                                                                  tttCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCtt                                  <  4:117756/149‑1 (MQ=255)

                                                                                                                     ccTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGGTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCAc                               <  1:547562/149‑1 (MQ=255)

                                                                                                                       tCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCtt                                  >  3:194645/1‑144 (MQ=255)

                                                                                                                       tCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCtt                                  <  4:194645/144‑1 (MQ=255)

                                                                                                                       tCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGt                             >  2:535106/1‑149 (MQ=255)

                                                                                                                       tCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGt                             >  1:126902/1‑149 (MQ=255)

                                                                                                                         gTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAggg                                                                                           >  2:720757/1‑85 (MQ=255)

                                                                                                                         gTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAggg                                                                                           <  1:720757/85‑1 (MQ=255)

                                                                                                                         gTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGttt                           <  2:253018/149‑1 (MQ=255)

                                                                                                                              tCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTaa                      >  4:363891/1‑149 (MQ=255)

                                                                                                                              tCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTaa                      <  4:579466/149‑1 (MQ=255)

                                                                                                                              tCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTaa                      <  3:720649/149‑1 (MQ=255)

                                                                                                                               cTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAAc                     <  1:762249/149‑1 (MQ=255)

                                                                                                                                ttttAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCt                                                                                                                >  3:722733/1‑57 (MQ=255)

                                                                                                                                ttttAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCt                                                                                                                <  4:722733/57‑1 (MQ=255)

                                                                                                                                ttttAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACt                    >  2:115148/1‑149 (MQ=255)

                                                                                                                                ttttAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACt                    >  4:863020/1‑149 (MQ=255)

                                                                                                                                ttttAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACt                    >  1:236347/1‑149 (MQ=255)

                                                                                                                                 tttAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTg                   <  1:419560/149‑1 (MQ=255)

                                                                                                                                      gCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTa              <  2:790633/149‑1 (MQ=255)

                                                                                                                                        gTTCAATTTAAGTAGCCCAAAGCGGGCTGcttaaattgaacgcctaaaagataaacgaggaaacaaatggctcgtacaacacccatcgcacgctaccgtaacatcggtatcagt                                               <  3:551716‑M2/114‑86 (MQ=255)

                                                                                                                                        gTTCAATTTAAGTAGCCCAAAGCGGGCTGcttaaattgaacgcctaaaagataaacgaggaaacaaatggctcgtacaacacccatcgcacgctaccgtaacatcggtatcagt                                               >  4:551716‑M2/1‑29 (MQ=255)

                                                                                                                                        gTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGAAcc            >  3:599841/1‑149 (MQ=255)

                                                                                                                                         ttCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCt           >  2:439092/1‑149 (MQ=255)

                                                                                                                                         ttCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCt           >  1:579302/1‑149 (MQ=255)

                                                                                                                                         ttCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCt           >  2:256971/1‑149 (MQ=255)

                                                                                                                                          tCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCtt          <  3:604888/149‑1 (MQ=255)

                                                                                                                                           cAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCttt         <  4:400427/149‑1 (MQ=255)

                                                                                                                                           cAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCttt         <  3:613791/149‑1 (MQ=255)

                                                                                                                                            aaTTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCTTTg        >  4:372329/1‑149 (MQ=255)

                                                                                                                                             aTTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCTTTGt       <  3:13551/149‑1 (MQ=255)

                                                                                                                                             aTTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCTTTGt       >  2:627292/1‑149 (MQ=255)

                                                                                                                                              tttAAGTAGCCCAAAGCGGGCTGcttaaattgaacgcctaaaagataaacgaggaaacaaatggctcgtacaacgcccatcgcacgctaccgtaacatcg                                                       >  4:166045‑M2/1‑23 (MQ=255)

                                                                                                                                              tttAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAAc                     >  1:604498/1‑134 (MQ=255)

                                                                                                                                              tttAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAAc                     <  2:604498/134‑1 (MQ=255)

                                                                                                                                              tttAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCTTTGtt      <  3:65081/149‑1 (MQ=255)

                                                                                                                                               ttAAGTAGCCCAAAGCGGGCTGcttaaattgaacgcctaaaagataaacgaggaaacaaatggctcgtacaacacccatcgcacgctaccgtaacatcggtatcagtgcgcacatcgacgccggtaaaaccactactaccgaacgtatt     <  3:747392‑M2/149‑128 (MQ=255)

                                                                                                                                                 aaGcagcccgctttgggctacttaaattgaacgcctaaaagataaacgaggaaacaaatggctcgtacaacacccatcgcacgctaccgtaacatcggtatcagtgcgcacatcgacgccggtaaaaccactactaccgaacgtattct   <  3:521093‑M1/149‑147 (MQ=255)

                                                                                                                                                 aaGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCTTTGTTTTc   <  2:58436/149‑1 (MQ=255)

                                                                                                                                                 aaGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCTTTGTTTTc   <  4:53757/149‑1 (MQ=255)

                                                                                                                                                  aGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAGCCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCTTTGTTTTCt  >  4:604005/1‑149 (MQ=255)

GTTTACACCGGTGTAGAACAGAATACGTTCGGTAGTAGTGGTTTTACCGGCGTCGATGTGCGCACTGATACCGATGTTACGGTAGCGTGCGATGGGTGTTGTACGAGCCATTTGTTTCCTCGTTTATCTTTTAGGCGTTCAATTTAAGTAGCCCAAAGCGGGCTGCTTACTGGAAGCGCCCGCCTGGTGACTAAAACTCCGAAGGGATAACCAACGGTAGTGTGCGAACGCCTTGTTGGCTTCGGCCATACGGTGAACGTCTTCACGTTTCTTAACTGCAGTACCTTTGTTTTCT  >  NC_000913/3473404‑3473698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.