New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 144480 =126 (1.270)7 (0.080) 6/248 NT 5.9% intergenic (+8/‑97) yadH/yadI putative ABC transporter permease/putative PTS Enzyme IIA
?NC_000913 144508 = 106 (1.140)intergenic (+36/‑69) yadH/yadI putative ABC transporter permease/putative PTS Enzyme IIA

Only 100 of 152 total aligned reads displayed.

ATCAGTGGTTTCCGCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCTGTCACGATGACCGGGCGCAAGAGATAC  >  NC_000913/144332‑144625
                                                                                                                                                    |                                                                                                                                                 
gtgccccatgttttttctccagcgcatccagtatctcttgcgcccggtcatcgtgacaggtaattacccaacctaacatcgccttcctccttagccgaaaatcagtctaccctgaccattgttgataaagggtgatagccgtcaaaact                                                                                                                                                   >  4:795570‑M1/149‑149 (MQ=255)
gtgccccatgttttttctccagcgcatccagtatctcttgcgcccggtcatcgtgacaggtaattacccaacctaacatcgccttcctccttagccgaaaatcagtctaccctgaccattgttgataaagggtgatagccgtcaaaact                                                                                                                                                   <  1:551838‑M1/1‑1 (MQ=255)
 tgccccatgttttttctccagcgcatccagtatctcttgcgcccggtcatcgtgacaggtaattacccaacctaacatcgccttcctccttagccgaaaatcagtctaccctgaccattgttgataaagggtgatagccgtcaaaactc                                                                                                                                                  >  4:626848‑M1/148‑149 (MQ=255)
 tgccccatgttttttctccagcgcatccagtatctcttgcgcccggtcatcgtgacaggtaattacccaacctaacatcgccttcctccttagccgaaaatcagtctaccctgaccattgttgataaagggtgatagccgtcaaaactc                                                                                                                                                  >  1:237832‑M1/148‑149 (MQ=255)
 tgccccatgttttttctccagcgcatccagtatctcttgcgcccggtcatcgtgacaggtaattacccaacctaacatcgccttcctccttagccgaaaatcagtctaccctgaccattgttgataaagggtgatagccgtcaaaactc                                                                                                                                                  >  1:627129‑M1/148‑149 (MQ=255)
 tCAGTGGTTTCCGCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTtc                                                                                                                                                  >  2:100930/1‑149 (MQ=255)
 tCAGTGGTTTCCGCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTtc                                                                                                                                                  <  2:35659/149‑1 (MQ=255)
 tCAGTGGTTTCCGCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTtc                                                                                                                                                  >  4:713878/1‑149 (MQ=255)
  cAGTGGTTTCCGCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGCTCCACCGTGGACGTGGTTTGCGTAGCTAAGGCTTTTtcc                                                                                                                                                 <  2:261196/149‑1 (MQ=255)
  cAGTGGTTTCCGCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTtcc                                                                                                                                                 <  1:726183/149‑1 (MQ=255)
   aGTGGTTTCCGCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTtcct                                                                                                                                                >  1:243179/1‑149 (MQ=255)
             gCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGa                                                                                                                                      >  4:721146/1‑149 (MQ=255)
             gCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGa                                                                                                                                      >  4:224734/1‑149 (MQ=255)
              cTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGAt                                                                                                                                     >  3:279687/1‑149 (MQ=255)
                   gCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTggg                                                                                                                                <  4:209706/149‑1 (MQ=255)
                   gCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTggg                                                                                                                                <  3:750294/149‑1 (MQ=255)
                   gCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATACAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTggg                                                                                                                                <  2:350016/149‑1 (MQ=255)
                     ttCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTggggg                                                                                                                              >  3:346894/1‑149 (MQ=255)
                        cTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGgaga                                                                                                                           <  1:706752/149‑1 (MQ=255)
                           ccagtatctgttgcgcccggtcatcgtgacaggtaattacccaaccttacatcgccttcctccgtagccgaaaatcagtctaccctgaccattgttgataaagggtgatagccgtcaaaacTCCTCTCGTCGGGATTTGGGGGagaggt                                                                                                                        >  2:841919‑M1/122‑148 (MQ=255)
                             tATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGt                                                                                                                      <  2:852168/149‑1 (MQ=255)
                              aTCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGtt                                                                                                                     >  4:147176/1‑149 (MQ=255)
                               tatctcttgcgcccggtcatcgtgacaggtaattacccaacctaacatcgccttcctccttagccgaaaatcagtctaccctgaccattgttgataaagggtgatagccgtcaaaacTCCTCTCCTCTGGATTTGGGGGAGAGGAGttt                                                                                                                    >  1:381752‑M1/118‑149 (MQ=255)
                               tCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGttt                                                                                                                    <  2:834588/149‑1 (MQ=255)
                                cAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGtttt                                                                                                                   <  1:127323/149‑1 (MQ=255)
                                atctcttgcgcccggtcatcgtgacaggtaattacccaacctaacatcgccttcctccttagccgaaaatcagtctaccctgaccattgttgataaagggtgatagccgtcaaaacTCCTCTCCTCTGGATTTGGGGGAGAGGAGtttt                                                                                                                   >  1:292745‑M1/117‑149 (MQ=255)
                                 aaTGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTgggg                                                                                                                               <  2:76969/136‑1 (MQ=255)
                                 aaTGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGgaga                                                                                                                           <  2:444308/140‑1 (MQ=255)
                                  atgatgTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGa                                                                                                                 <  3:721146/149‑1 (MQ=255)
                                   tgatgTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGa                                                                                                                 <  4:635427/148‑1 (MQ=255)
                                   agatgTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGa                                                                                                                 >  3:635427/2‑148 (MQ=255)
                                    gatgTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGtttt                                                                                                                   <  1:51187/145‑1 (MQ=255)
                                    gatgTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGtttt                                                                                                                   >  2:51187/1‑145 (MQ=255)
                                    gatgTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACg                                                                                                               >  3:730175/1‑149 (MQ=255)
                                             cTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGGGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCAcc                                                                                                      >  3:261748/1‑149 (MQ=255)
                                                gTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCAcc                                                                                                      <  3:636149/146‑1 (MQ=255)
                                                 tCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCttt                                                                                                  <  2:143579/149‑1 (MQ=255)
                                                   aCTACCTTTGGCGTACTGGAGGTCTGTATGGTGGCGTTTGATTTGATCTGTTTGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATATCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTAt                                                                                                >  4:556246/1‑149 (MQ=255)
                                                     tACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGc                                                                                                             >  3:42731/1‑134 (MQ=255)
                                                     tACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGc                                                                                                             <  4:42731/134‑1 (MQ=255)
                                                     tACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATca                                                                                              >  2:854248/1‑149 (MQ=255)
                                                        cTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATtaaca                                                                                           >  3:501483/1‑149 (MQ=255)
                                                          ttGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAAt                                                                                         >  4:748758/1‑149 (MQ=255)
                                                             gCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGt                                                                                      <  2:631074/149‑1 (MQ=255)
                                                                tACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGgaga                                                                                                                           <  3:148048/109‑1 (MQ=255)
                                                                   tggtggTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAgg                                                                                  >  2:47808/1‑147 (MQ=255)
                                                                   tggtggTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAgg                                                                                  <  1:47808/147‑1 (MQ=255)
                                                                     gtggtCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGttt                                                                                                                    >  1:848193/1‑111 (MQ=255)
                                                                      tggtCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGa                                                                             <  1:625768/149‑1 (MQ=255)
                                                                        gtCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGGGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGTGGGGTTTTGACGGCTATCACCCTTTATCACCATTGGTGAGGGtggggt                                                                           >  4:690042/1‑144 (MQ=255)
                                                                        ggcTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATCTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACt                                                                           >  1:204750/3‑149 (MQ=255)
                                                                             atcgccttcctccttagccgaaaatcagtctaccctgaccattgttgataaagggtgatagccgtcaaaactcctctc                                                                                                                                             <  3:709502‑M1/7‑1 (MQ=255)
                                                                               ttGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTTGACTGATTTTc                                                                    <  1:665655/149‑1 (MQ=255)
                                                                               ttGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTc                                                                    <  3:207395/149‑1 (MQ=255)
                                                                               ttGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTc                                                                    <  4:485629/149‑1 (MQ=255)
                                                                                  tgGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATcaa                                                                                             >  1:338764/1‑121 (MQ=255)
                                                                                     cGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTaa                                                              <  3:172557/149‑1 (MQ=255)
                                                                                     cGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTaa                                                              <  2:14141/149‑1 (MQ=255)
                                                                                        tttATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAag                                                             <  3:198888/147‑1 (MQ=255)
                                                                                        tttATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAag                                                             >  4:198888/1‑147 (MQ=255)
                                                                                          ttagccgaaaatcagtctaccctgaccattgttgataaagggtgatagccgtcaaaacTCCTCTCCTCTGGATTTGGGGGagag                                                                                                                          <  4:257687‑M1/26‑1 (MQ=255)
                                                                                            tttGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGaa                                                       >  4:476981/1‑149 (MQ=255)
                                                                                            tttGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGaa                                                       >  4:190504/1‑149 (MQ=255)
                                                                                            tttGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGaa                                                       >  2:90107/1‑149 (MQ=255)
                                                                                            tttGATCTGTTGGTCGCTGATAGAACGTGGGCGAGGTTTGGGTAGTTAAGGGGATTTCCGCTCATCTGGATTTGGGGGAGAAGAGTTTTGGGGGCTTTCACCCTTGATCATCAATGGTAAGAGTAGTCTGATTTGCGGTTAAggaggag                                                       >  2:44619/1‑148 (MQ=255)
                                                                                             ttGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAg                                                      <  3:416826/149‑1 (MQ=255)
                                                                                               gATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGc                                                    >  4:739160/1‑149 (MQ=255)
                                                                                               gATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGc                                                    >  2:567288/1‑149 (MQ=255)
                                                                                                  cTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGAt                                                 <  1:189551/149‑1 (MQ=255)
                                                                                                   tGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTgg                                                                                                                                 <  1:679627/68‑1 (MQ=255)
                                                                                                   tGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTgg                                                                                                                                 >  2:679627/1‑68 (MQ=255)
                                                                                                   tGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATg                                                >  2:500623/1‑149 (MQ=255)
                                                                                                   tGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATg                                                <  3:224734/149‑1 (MQ=255)
                                                                                                    gTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGt                                               >  1:724410/1‑149 (MQ=255)
                                                                                                      tGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTa                                             <  4:65247/149‑1 (MQ=255)
                                                                                                      tGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTa                                             <  3:511626/149‑1 (MQ=255)
                                                                                                           gCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTg                                        >  1:876588/1‑149 (MQ=255)
                                                                                                            cTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACTATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTgg                                       <  3:77178/149‑1 (MQ=255)
                                                                                                            cTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTgg                                       <  1:854248/149‑1 (MQ=255)
                                                                                                            cTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTgg                                       <  3:690042/149‑1 (MQ=255)
                                                                                                             tGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCGCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCATGGTAGACAGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTggg                                      <  4:261775/149‑1 (MQ=255)
                                                                                                               aTCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTa                                    >  4:97405/1‑149 (MQ=255)
                                                                                                                  cAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATgg                                                                                       <  2:878344/95‑1 (MQ=255)
                                                                                                                  cAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAAtt                                 <  1:90107/149‑1 (MQ=255)
                                                                                                                   aaCGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTa                                <  1:10680/149‑1 (MQ=255)
                                                                                                                   aaCGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTa                                >  2:606809/1‑149 (MQ=255)
                                                                                                                      gtggacgtggTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCt                             <  2:293726/149‑1 (MQ=255)
                                                                                                                      gtggacgtggTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCt                             <  2:542952/149‑1 (MQ=255)
                                                                                                                      gtggacgtggTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCt                             <  1:555966/149‑1 (MQ=255)
                                                                                                                          acgtggTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCTGTCa                         >  1:692176/1‑149 (MQ=255)
                                                                                                                             tggTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCTGTCACGa                      <  3:393971/149‑1 (MQ=255)
                                                                                                                                tttGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAag                                                             >  4:107988/1‑107 (MQ=255)
                                                                                                                                tttGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAag                                                             <  3:107988/107‑1 (MQ=255)
                                                                                                                                     gTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCTGTCACGATGACCggg              >  2:771112/1‑149 (MQ=255)
                                                                                                                                        gCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCTGTCACGATGACCGGgcgc           >  4:50741/1‑149 (MQ=255)
                                                                                                                                        agccgtcaaaacTCCTCTCCCCCAAATCCAGAGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCt                             >  4:874366‑M1/13‑131 (MQ=255)
                                                                                                                                        agccgtcaaaacTCCTCTCCCCCAAATCCAGAGGAGAGGAGGTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCt                             <  3:874366‑M1/119‑1 (MQ=255)
                                                                                                                                            aGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCTGTCACGATGACCGGGCGCAaga       <  4:413437/149‑1 (MQ=255)
                                                                                                                                                tATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCTGTCACGATGACCGGGCGCAAGAGATa   >  1:309633/1‑149 (MQ=255)
                                                                                                                                                 aTTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCTGTCACGATGACCGGGCGCAAGAGATAc  <  3:241898/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
ATCAGTGGTTTCCGCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAAGGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACTGATTTTCGGCTAAGGAGGAAGGCGATGTTAGGTTGGGTAATTACCTGTCACGATGACCGGGCGCAAGAGATAC  >  NC_000913/144332‑144625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.