New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3360184	72 (0.730)	4 (0.040)	3/250	NT	5.5%	coding (987/1419 nt)	gltD	glutamate synthase, 4Fe‑4S protein, small subunit
	?	NC_000913	= 3360201	69 (0.740)					coding (1004/1419 nt)	gltD	glutamate synthase, 4Fe‑4S protein, small subunit

CCGTTCGTCAGCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACGCCAAAGGCCGTCGCC  >  NC_000913/3360038‑3360332                                                                                                                                                      |                                                                                                                                                     ccGTTCGTCATTATGGAAGGCAACCGAGTGGAGGTCCTAAGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTACGCCAGGGAGCGAACCACGTTACCTGTGACTGTCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑ccgccg                                                                                                                                                    >  4:311208/1‑149 (MQ=255) ccGTTCGTCAGCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑ccgccg                                                                                                                                                    >  4:694380/1‑149 (MQ=255)   gTTCGTCAGCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGACGAGAACATGCCGGGTTC‑‑‑CCGCcgcg                                                                                                                                                  <  2:183999/149‑1 (MQ=255)     tCGTCAGCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGaa                                                                                                                                                <  2:354266/149‑1 (MQ=255)     tCGTCAGCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGaa                                                                                                                                                <  3:679053/149‑1 (MQ=255)       gTCAGCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGt                                                                                                                                              <  4:720273/149‑1 (MQ=255)           gCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGaaa                                                                                                                                          >  3:609682/1‑149 (MQ=255)           gCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGCCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGaaa                                                                                                                                          >  4:836469/1‑149 (MQ=255)              tGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAAc                                                                                                                                       >  3:540920/1‑149 (MQ=255)              tGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAAc                                                                                                                                       <  1:597089/149‑1 (MQ=255)                 aaGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCg                                                                                                                                    >  3:378659‑M2/1‑148 (MQ=255)                  aGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCgc                                                                                                                                   <  1:545548‑M2/149‑3 (MQ=255)                   ggCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCgcg                                                                                                                                  <  1:465002‑M2/149‑4 (MQ=255)                      aaaCGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTCCCGCCGCgcgtttttcacttcgcggcg                                                                                                                                  <  2:869665‑M1/149‑21 (MQ=255)                      aaaCGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCgcggga                                                                                                                               <  1:554843‑M2/149‑7 (MQ=255)                      aaaCGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCgcggga                                                                                                                               <  1:699075‑M2/149‑7 (MQ=255)                           cgTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGaagaag                                                                                                                          <  3:90696/149‑1 (MQ=255)                           cgTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGaagaag                                                                                                                          <  3:871472/149‑1 (MQ=255)                             tggtggTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGc                                                                                                                        <  3:694380/149‑1 (MQ=255)                             tggtggTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGc                                                                                                                        <  2:163342/149‑1 (MQ=255)                               gtggtCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCgcgtttttcacttcgcggcgggaacccggcat                                                                                                                      <  4:104746‑M1/149‑33 (MQ=255)                               gtggtCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGt                                                                                                                      >  1:444926/1‑149 (MQ=255)                                tggtCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTa                                                                                                                     <  1:292513/149‑1 (MQ=255)                                  gtCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTaga                                                                                                                   <  4:788691/149‑1 (MQ=255)                                    ccTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGt                                                                                                                 <  1:558041/149‑1 (MQ=255)                                              ggCAACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCaa                                                                                                       <  3:549622/149‑1 (MQ=255)                                               gCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAAc                                                                                                      <  1:382410/149‑1 (MQ=255)                                                 gACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGt                                                                                                    >  4:174270/1‑149 (MQ=255)                                                    acTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCa                                                                                                 >  2:187688/1‑149 (MQ=255)                                                        cGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCg                                                                                             >  4:237537/1‑149 (MQ=255)                                                           tGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTg                                                                                          <  3:118703/149‑1 (MQ=255)                                                              aCTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGt                                                                                       >  1:737366/1‑149 (MQ=255)                                                                    tgcgtACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGaa                                                                                 <  1:74642/149‑1 (MQ=255)                                                                       gtACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTg                                                                              <  2:545548/149‑1 (MQ=255)                                                                       gtACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTg                                                                              >  3:362780/1‑149 (MQ=255)                                                                        tACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGa                                                                             >  1:524856/1‑149 (MQ=255)                                                                         aCGTCCGTGCGCCAGGGAGCTAAGCACGTTACCTGCGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGaa                                                                            <  1:302951/149‑1 (MQ=255)                                                                         aCGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGaa                                                                            <  3:37396/149‑1 (MQ=255)                                                                          cGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAATATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAAc                                                                           <  3:836469/149‑1 (MQ=255)                                                                          cGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAAc                                                                           <  4:402419/149‑1 (MQ=255)                                                                          cGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAAc                                                                           <  4:511209/149‑1 (MQ=255)                                                                           gTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACg                                                                          <  3:732789/149‑1 (MQ=255)                                                                                tGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAAc                                                                     >  1:345807/1‑149 (MQ=255)                                                                                     cAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCaa                                                                >  1:741794/1‑149 (MQ=255)                                                                                      aGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCaaa                                                               >  2:97513/1‑149 (MQ=255)                                                                                      aGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCaaa                                                               <  3:855981/149‑1 (MQ=255)                                                                                       gggAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCgcgtttttcacttcgcggcg                                                                                                                                  >  3:175851‑M1/1‑61 (MQ=255)                                                                                       gggAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCgcgtttttcacttcgcggcg                                                                                                                                  <  4:175851‑M1/81‑21 (MQ=255)                                                                                        ggAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAATGGTAACGGCAAAGt                                                             >  2:522997/1‑149 (MQ=255)                                                                                         gAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTc                                                            >  1:128479/1‑149 (MQ=255)                                                                                             gAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAgcg                                                        <  4:530779/149‑1 (MQ=255)                                                                                              aaGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAgcgg                                                       >  2:598811/1‑149 (MQ=255)                                                                                               aGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAgcggc                                                      >  3:862942/1‑149 (MQ=255)                                                                                                 cACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGt                                                    >  3:45975/1‑149 (MQ=255)                                                                                                     ttACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTaaaa                                                >  1:665755/1‑149 (MQ=255)                                                                                                        ccTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTaaannnn                                             <  2:554843/149‑5 (MQ=255)                                                                                                         cTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATgg                                            <  3:810986/149‑1 (MQ=255)                                                                                                          tgtgCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGt                                           >  2:407867/1‑149 (MQ=255)                                                                                                            tgCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGc                                         <  3:174270/149‑1 (MQ=255)                                                                                                             gCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCg                                        >  4:682639/1‑149 (MQ=255)                                                                                                               cTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTa                                      >  3:253978/1‑149 (MQ=255)                                                                                                               cTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTa                                      >  2:158384/1‑149 (MQ=255)                                                                                                                     tcgtGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGaaa                                >  4:756402/1‑149 (MQ=255)                                                                                                                     tcgtGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGaaa                                >  1:469054/1‑149 (MQ=255)                                                                                                                        tgatgaAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATgg                             <  1:472757/149‑1 (MQ=255)                                                                                                                        tgatgaAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATgg                             <  2:524856/149‑1 (MQ=255)                                                                                                                        tgatgaAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATgg                             <  2:128479/149‑1 (MQ=255)                                                                                                                        tgatgaAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATgg                             >  1:108211/1‑149 (MQ=255)                                                                                                                        tgatgaAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATgg                             <  2:665755/149‑1 (MQ=255)                                                                                                                          atgaAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGc                           >  3:863532/1‑149 (MQ=255)                                                                                                                            gaAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGa                         >  1:61773/1‑149 (MQ=255)                                                                                                                             aaGAGAACATGCCGGGTTC‑‑‑GCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGaa                        >  3:695751/1‑149 (MQ=255)                                                                                                                               gagaACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAAcc                      >  4:357681/1‑149 (MQ=255)                                                                                                                               gagaACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAAcc                      >  2:501946/1‑149 (MQ=255)                                                                                                                               gagaACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAAcc                      >  3:847508/1‑149 (MQ=255)                                                                                                                               gagaACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAAcc                      >  2:201134/1‑149 (MQ=255)                                                                                                                                 gaACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCgg                    <  3:237537/149‑1 (MQ=255)                                                                                                                                    cATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGt                                                                               <  4:277654/87‑1 (MQ=255)                                                                                                                                    cATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGt                                                                               >  3:277654/1‑87 (MQ=255)                                                                                                                                    cATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACg                 <  4:362780/149‑1 (MQ=255)                                                                                                                                     aTGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCgcgggaacccggcatgttctcttcatcacgacgataggcacaggtaacgtgcttcgctccctggcgcacggacgtacgcacgcagtccatcgcagtgtcgccaccgccaaggaccac                <  4:104746‑M2/149‑118 (MQ=255)                                                                                                                                     aTGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACGc                >  4:323455/1‑149 (MQ=255)                                                                                                                                     aTGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACGc                <  2:708958/149‑1 (MQ=255)                                                                                                                                            gTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACGCCAAAGGc         >  3:428738/1‑149 (MQ=255)                                                                                                                                             ttC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACGCCAAAGGcc        <  1:201134/149‑1 (MQ=255)                                                                                                                                              tC‑‑‑CCGCgcgtttttcacttcgcggcgggaacccggcatgttctcttcatcacgacgataggcacaggtaacgtgcttcgctccctggcgcacggacgtacgcacgcagtccatcgcagtgtcgccaccgccaaggaccaccacgcgttt       <  1:554843‑M1/149‑144 (MQ=255)                                                                                                                                              tC‑‑‑CCGCgcgtttttcacttcgcggcgggaacccggcatgttctcttcatcacgacgataggcacaggtaacgtgcttcgctccctggcgcacggacgtacgcacgcagtccatcgcagtgtcgccaccgccaaggaccaccacgcgttt       <  1:699075‑M1/149‑144 (MQ=255)                                                                                                                                                   ccgccgCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACGCCAAAGGCCGTc     <  4:847508/149‑1 (MQ=255)                                                                                                                                                   ccaccgcGAAATGATAAATGTACAAGAAGAAGGAGTAGAGTTCAAACTCAACGTCAAGCCGCTGGGTATTGAAGTGAACGGGAAAGGCAAAGTCAGCAGCGTAAAATTGGTGCGTACCGAAATGGGCAAACAGGACGACAAAGGCCGTc     <  4:389047/146‑1 (MQ=255)                                                                                                                                                    cgcgcgtttttcacttcgcggcgggaacccggcatgttctcttcatcacgacgataggcacaggtaacgtgcttcgctccctggcgcacggacgtacgcacgcagtccatcgcagtgtcgccaccgccaaggaccaccacgcgtttgcc    <  1:465002‑M1/149‑147 (MQ=255)                                                                                                                                                    cgccgcGAAGTGAAAAACGCgcgggaacccggcatgttctcttcatcacgacgataggcacaggtaacgtgcttcgctccc                                                                        <  4:175851‑M2/81‑62 (MQ=255)                                                                                                                                                    cgccgcGAAGTGAAAAACGCgcgggaacccggcatgttctcttcatcacgacgataggcacaggtaacgtgcttcgctccc                                                                        >  3:175851‑M2/1‑20 (MQ=255)                                                                                                                                                    cgccgcGAAGTGAAAAACGCgcggcgggaacccggcatgttctcttcatcacgacgataggcacaggtaacgtgcttcgctccctggcgcacggacgtacgcacgcagtccatcgcagtgtcgccaccgccaaggaccaccacgcgttt    <  2:869665‑M2/149‑130 (MQ=255)                                                                                                                                                     gcgcgtttttcacttcgcggcgggaacccggcatgttctcttcatcacgacgataggcacaggtaacgtgcttcgctccctggcgcacggacgtacgcacgcagtccatcgcagtgtcgccaccgccaaggaccaccacgcgtttgcct   <  1:545548‑M1/149‑148 (MQ=255)                                                                                                                                                     gccgcGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCgg                    <  3:794598/132‑1 (MQ=255)                                                                                                                                                     gccgcGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCgg                    >  4:794598/1‑132 (MQ=255)                                                                                                                                                      cgcgtttttcacttcgcggcgggaacccggcatgttctcttcatcacgacgataggcacaggtaacgtgcttcgctccctggcgcacggacgtacgcacgcagtccatcgcagtgtcgccaccgccaaggaccaccacgcgtttgcctt  >  3:378659‑M1/1‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CCGTTCGTCAGCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTC‑‑‑CCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACGCCAAAGGCCGTCGCC  >  NC_000913/3360038‑3360332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.