New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3446419 =	90 (1.060)	3 (0.040)	3/252	NT	3.5%	coding (127/393 nt)	rpsH	30S ribosomal subunit protein S8
	?	NC_000913	3446464 =	79 (0.970)					coding (82/393 nt)	rpsH	30S ribosomal subunit protein S8
Rejected: Frequency below/above cutoff threshold.

AATTGAATCACGGGAGTAAAGACAGATGAGCATGCAAGATCCGATCGCGGATATGCTGACCCGTATCCGTAACGGTCAGGCCGCGAACAAAGCTGCGGTCACCATGCCTTCCTCCAAGCTGAAAGTGGCAATCGCCAACGTGCTGAAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3446570‑3446419 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggaagGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGATTCAATTGGTGACAATTACCAGCTAGCCTTTTTCAGACCCGGGATTT  >  NC_000913/3446464‑3446610                                                                                                                                                                                                                                                                                                             AATTGAATCACGGGAGTAAAGACAGATGAGCATGCAAGATCCGATCGCGGATATGCTGACCCGTATCCGTAACGGTCAGGCCGCGAACAAAGCTGCGGTCACCATGCCTTCCTCCAAGCTGAAAGTGGCAATCGCCAACGTGCTGAAGG                                                                                                                                                        >  4:471604/1‑149   TTGAATCACGGGAGTAAAGACAGATGAGCATGCAAGATCCGATCGCGGATATGCTGACCCGTATCCGTAACGGTCAGGCCGCGAACAAAGCTGCGGTCACCATGCCTTCCTCCAAGCTGAAAGTGGCAATCGCCAACGTGCTGAAGGAA                                                                                                                                                      <  4:528778/149‑1                         GATGAGCATGCAAGATCCGATCGCGGATATGCTGACCCGTATCCGTAACGGTCAGGCCGCGAACAAAGCTGCGGTCACCATGCCTTCCTCCAAGCTGAAAGTGGCAATCGCCAACGTGCTGAA                                                                                                                                                          <  1:274373/123‑1                         GATGAGCATGCAAGATCCGATCGCGGATATGCTGACCCGTATCCGTAACGGTCAGGCCGCGAACAAAGCTGCGGTCACCATGCCTTCCTCCAAGCTGAAAGTGGCAATCGCCAACGTGCTGAA                                                                                                                                                          >  2:274373/1‑123                                                                                                     ACCATGCCTTCCTCCAAGCTGAAAGTGGCAATCGCCAACGTGCTGAAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCG                                                    >  3:157387/1‑149                                                                                                       CATGCCTTCCTCCAAGCTGAAAGTGGCAATCGCCAACGTGCTGAAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTG                                                  >  2:151723/1‑149                                                                                                           CCTTCCTCCAAGCTGAAAGTGGCAATCGCCAACGTGCTGAAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGATTC                                              >  4:273254/1‑149                                                                                                                                                    GGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGATTCAATTGGTGACAATTACCAGCTAGCCTTTTTCAGACCCGGGA     >  2:755195/1‑149                                                                                                                                                    GGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGATTCAATTGGTGACAATTACCAGCTAGCCTTTTTCAGACCCGGGA     <  3:402804/149‑1                                                                                                                                                     GAAGGTATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGATTCAATTGGTGACAATTACCAGCTAGCCTTTTTCAGACCCGGGAT    >  4:94041/1‑149                                                                                                                                                     GAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGATTCAATTGGTGACAATTACCAGCTAGCCTTTTTCAGACCCGGGAT    <  1:189641/149‑1                                                                                                                                                       AGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGATTCAATTGGTGACAATTACAAGCTAGCCTTTTTCAGACCCGGGATTT  >  3:174751/1‑149                                                                                                                                                                                                                                                                                                             AATTGAATCACGGGAGTAAAGACAGATGAGCATGCAAGATCCGATCGCGGATATGCTGACCCGTATCCGTAACGGTCAGGCCGCGAACAAAGCTGCGGTCACCATGCCTTCCTCCAAGCTGAAAGTGGCAATCGCCAACGTGCTGAAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3446570‑3446419 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggaagGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGATTCAATTGGTGACAATTACCAGCTAGCCTTTTTCAGACCCGGGATTT  >  NC_000913/3446464‑3446610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.