BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3446419 =	90 (1.060)	3 (0.040)	3/252	NT	3.5%	coding (127/393 nt)	rpsH	30S ribosomal subunit protein S8
*	?	NC_000913	3446464 =	79 (0.970)	3 (0.040)	3/252	NT	3.5%	coding (82/393 nt)	rpsH	30S ribosomal subunit protein S8
Rejected: Frequency below/above cutoff threshold.

Only 100 of 111 total aligned reads displayed.

AGCTCATCTTTACGTTTATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGATTC  >  NC_000913/3446271‑3446566

aGCTCATCTTTACGTTTATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACcttc                                                                                                                                                     <  3:634276/149‑1 (MQ=255)

 gCTCATCTTTACGTTTATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACcttct                                                                                                                                                    >  3:633201/1‑149 (MQ=255)

  cTCATCTTTACGTTTATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACcttctt                                                                                                                                                   <  1:568170/149‑1 (MQ=255)

   tCATCTTTACGTTTATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCttcttc                                                                                                                                                  >  1:558688/1‑149 (MQ=255)

   tCATCTTTACGTTTATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCttcttc                                                                                                                                                  >  4:621819/1‑149 (MQ=255)

   tCATCTTTACGTTTATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCttcttc                                                                                                                                                  >  1:356023/1‑149 (MQ=255)

   atcccgggtctgaaaaaggctagctggtaattgtcaccaattgaatcacgggagtaaagacagatgagcatgcaagatccgatcgcggatatgctgacccgtatccgtaacggtcaggccgcgaacaaagctgcggtcaccatgccttc                                                                                                                                                  <  1:189641‑M1/4‑1 (MQ=255)

    tcccgggtctgaaaaaggctagctggtaattgtcaccaattgaatcacgggagtaaagacagatgagcatgcaagatccgatcgcggatatgctgacccgtatccgtaacggtcaggccgcgaacaaagctgcggtcaccatgccttcc                                                                                                                                                 <  3:402804‑M1/5‑1 (MQ=255)

    tcccgggtctgaaaaaggctagctggtaattgtcaccaattgaatcacgggagtaaagacagatgagcatgcaagatccgatcgcggatatgctgacccgtatccgtaacggtcaggccgcgaacaaagctgcggtcaccatgccttcc                                                                                                                                                 >  2:755195‑M1/145‑149 (MQ=255)

        tttACGTTTATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCa                                                                                                                                             >  1:70236/1‑149 (MQ=255)

             gTTTATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACg                                                                                                                                        >  1:360474/1‑149 (MQ=255)

              tttATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGt                                                                                                                                       <  2:558688/149‑1 (MQ=255)

              tttATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGt                                                                                                                                       >  4:294238/1‑149 (MQ=255)

                tataGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTg                                                                                                                                     <  3:744683/149‑1 (MQ=255)

                   aGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCg                                                                                                                                  <  3:112846/149‑1 (MQ=255)

                      tGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGAtt                                                                                                                               <  2:478523/149‑1 (MQ=255)

                       gcgcAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGTTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTg                                                                                                                              >  2:131455/1‑149 (MQ=255)

                         gcAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGcc                                                                                                                            >  2:295611/1‑149 (MQ=255)

                         gcAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGcc                                                                                                                            <  4:633201/149‑1 (MQ=255)

                              ccTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACttt                                                                                                                       >  2:40754/1‑149 (MQ=255)

                               cTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTc                                                                                                                      <  2:639864/149‑1 (MQ=255)

                                tGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCa                                                                                                                     <  1:131095/149‑1 (MQ=255)

                                 gggCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAg                                                                                                                    >  1:203676/1‑149 (MQ=255)

                                 gggCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAg                                                                                                                    >  4:180520/1‑149 (MQ=255)

                                     ggcTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAACATCTTCAATAAAACCTTCTTCCTCCAGCACGTTGGCGATTGCCACTTTCAGCTTg                                                                                                                <  4:182135/149‑1 (MQ=255)

                                        tGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTggag                                                                                                             <  2:731825/149‑1 (MQ=255)

                                            acGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAg                                                                                                         <  1:61619/149‑1 (MQ=255)

                                            acGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAg                                                                                                         <  4:119464/149‑1 (MQ=255)

                                             gaatcacgggagtaaagacagatgagcatgcaagatccgatcgcggatatgctgacccgtatccgtaacggtcaggccgcgaacaaagctgcggtcaccatgcCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAgg                                                                                                        >  4:273254‑M1/104‑149 (MQ=255)

                                             cGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAgg                                                                                                        <  2:489994/149‑1 (MQ=255)

                                                 cacgggagtaaagacagatgagcatgcaagatccgatcgcggatatgctgacccgtatccgtaacggtcaggccgcgaacaaagctgcggtcaccatgcCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATg                                                                                                    >  2:151723‑M1/100‑149 (MQ=255)

                                                  aaTGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATgg                                                                                                   <  1:110202/149‑1 (MQ=255)

                                                  aaTGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATgg                                                                                                   >  1:56516/1‑149 (MQ=255)

                                                   cgggagtaaagacagatgagcatgcaagatccgatcgcggatatgctgacccgtatccgtaacggtcaggccgcgaacaaagctgcggtcaccatgcCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGt                                                                                                  >  3:157387‑M1/98‑149 (MQ=255)

                                                       tttCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAACCCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAg                                                                                                         <  3:344851/138‑1 (MQ=255)

                                                       tttCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGAcc                                                                                              >  2:189641/1‑149 (MQ=255)

                                                       tttCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGAcc                                                                                              >  2:714994/1‑149 (MQ=255)

                                                       tttCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGAcc                                                                                              >  4:402804/1‑149 (MQ=255)

                                                       tttCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGAcc                                                                                              >  2:331494/1‑149 (MQ=255)

                                                       tttCTACAACAGCTTTGCCCTGGAAATACTTAAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAg                                                                                                         >  4:344851/1‑138 (MQ=255)

                                                        ttCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCg                                                                                             >  1:278341/1‑149 (MQ=255)

                                                             caacaGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCt                                                                                        <  1:433056/149‑1 (MQ=255)

                                                             caacaGCTTTACCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGAGTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCt                                                                                        >  4:493352/1‑149 (MQ=255)

                                                              aacaGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTg                                                                                                                              <  4:591831/110‑1 (MQ=255)

                                                              aacaGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTg                                                                                                                              >  3:591831/1‑110 (MQ=255)

                                                              aacaGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCtt                                                                                       >  3:174401/1‑149 (MQ=255)

                                                               acaGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCttt                                                                                      <  4:164910/149‑1 (MQ=255)

                                                                        cccTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGc                                                                             <  4:518716/149‑1 (MQ=255)

                                                                         ccTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGcc                                                                            >  1:684423/1‑149 (MQ=255)

                                                                          cTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCt                                                                           >  3:225235/1‑149 (MQ=255)

                                                                          cTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCt                                                                           >  3:43861/1‑149 (MQ=255)

                                                                          cTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCt                                                                           >  2:185785/1‑149 (MQ=255)

                                                                           tGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCtt                                                                                       <  2:314812/136‑1 (MQ=255)

                                                                             gAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGAc                                                                        <  3:619270/149‑1 (MQ=255)

                                                                                   cTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTAc                                                                  <  2:146154/149‑1 (MQ=255)

                                                                                    ttCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACg                                                                 >  4:344625/1‑149 (MQ=255)

                                                                                        gagTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATa                                                             >  2:94674/1‑149 (MQ=255)

                                                                                        gagTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATa                                                             >  1:253931/1‑149 (MQ=255)

                                                                                         agTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGt                                                                                                  >  1:513231/1‑111 (MQ=255)

                                                                                         agTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGt                                                                                                  <  2:513231/111‑1 (MQ=255)

                                                                                           tAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACgg                                                          >  3:51283/1‑149 (MQ=255)

                                                                                             aGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGt                                                        <  2:70236/149‑1 (MQ=255)

                                                                                              gTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGt                                                                                                  >  1:654654/1‑106 (MQ=255)

                                                                                              gTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGt                                                                                                  <  2:654654/106‑1 (MQ=255)

                                                                                              gTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTc                                                       <  1:679656/149‑1 (MQ=255)

                                                                                                tCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAg                                                     >  1:747433/1‑149 (MQ=255)

                                                                                                     ttCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCatat                                                >  4:67193/1‑149 (MQ=255)

                                                                                                     ttCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCatat                                                <  1:295611/149‑1 (MQ=255)

                                                                                                     ttCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCatat                                                >  1:770272/1‑149 (MQ=255)

                                                                                                          gCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCcgcg                                           >  3:613522/1‑149 (MQ=255)

                                                                                                          gCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCcgcg                                           >  3:616383/1‑149 (MQ=255)

                                                                                                            ttGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGAt                                         <  4:43861/149‑1 (MQ=255)

                                                                                                                tgtCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGa                                     <  4:613522/149‑1 (MQ=255)

                                                                                                                 gtCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGAt                                    <  4:517447/149‑1 (MQ=255)

                                                                                                                 gtCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGAt                                    <  1:185785/149‑1 (MQ=255)

                                                                                                                    gCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAg                                                                                                         <  3:745879/77‑1 (MQ=255)

                                                                                                                    gCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAg                                                                                                         >  4:745879/1‑77 (MQ=255)

                                                                                                                      cTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGc                               >  2:104202/1‑149 (MQ=255)

                                                                                                                       ttCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCa                              >  1:497854/1‑149 (MQ=255)

                                                                                                                       ttCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCa                              <  1:106515/149‑1 (MQ=255)

                                                                                                                            cTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTc                         <  1:174858/149‑1 (MQ=255)

                                                                                                                            cTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTc                         <  3:515406/149‑1 (MQ=255)

                                                                                                                             tttAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCa                        >  4:199954/1‑149 (MQ=255)

                                                                                                                                aaaaTCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCt                     <  3:180520/149‑1 (MQ=255)

                                                                                                                                    tCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCt                 <  4:363136/149‑1 (MQ=255)

                                                                                                                                    tCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCt                 <  3:621819/149‑1 (MQ=255)

                                                                                                                                    tCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCt                 <  3:27365/149‑1 (MQ=255)

                                                                                                                                      ttCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCttt               >  2:467568/1‑149 (MQ=255)

                                                                                                                                         aaTAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACt            >  3:612810/1‑149 (MQ=255)

                                                                                                                                          aTAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTc           >  3:586459/1‑149 (MQ=255)

                                                                                                                                           tAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTcc          >  2:318067/1‑149 (MQ=255)

                                                                                                                                            aaaaCCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTccc         <  4:651110/149‑1 (MQ=255)

                                                                                                                                             aaaCCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCg        <  2:497854/149‑1 (MQ=255)

                                                                                                                                              aaCCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGt       <  4:215940/149‑1 (MQ=255)

                                                                                                                                                ccTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGa     >  1:685855/1‑149 (MQ=255)

                                                                                                                                                 cttcttCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGAt    >  4:391157/1‑149 (MQ=255)

                                                                                                                                                 cttcttCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGAt    >  3:160230/1‑149 (MQ=255)

                                                                                                                                                  ttcttcCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATcc                                              <  4:413649/106‑1 (MQ=255)

                                                                                                                                                  ttcttcCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATcc                                              >  3:413649/1‑106 (MQ=255)

                                                                                                                                                  ttcttcCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGAtt   >  1:755629/1‑149 (MQ=255)

AGCTCATCTTTACGTTTATAGATGCGCAGACCTGGGCGGCTGACACGCTGAATGCTTTCTACAACAGCTTTGCCCTGGAAATACTTCAGAGTAAGTTCCAGTTCAGGCTTGGTGTCGCCTTCAACTTTAAAATCTTCAATAAAACCTTCTTCCTTCAGCACGTTGGCGATTGCCACTTTCAGCTTGGAGGAAGGCATGGTGACCGCAGCTTTGTTCGCGGCCTGACCGTTACGGATACGGGTCAGCATATCCGCGATCGGATCTTGCATGCTCATCTGTCTTTACTCCCGTGATTC  >  NC_000913/3446271‑3446566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.