New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3477954	65 (0.760)	3 (0.040)	3/260	NT	4.6%	coding (544/591 nt)	slyD	FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase)
	?	NC_000913	= 3478025	60 (0.720)					coding (473/591 nt)	slyD	FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase)
Rejected: Frequency below/above cutoff threshold.

CCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3477882‑3477954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcACCACCACGATCACGACCACGACGGTTGCTGCGGCGGTCATGGCCACGATCACGGTCATGAACACGGTGGCGAAGG  <  NC_000913/3478025‑3477950                                                                                                                                                       CCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCACCACCACGATCACGACCACGACGGTTGCTGCGGCGGTCATGGCCACGATCACGGTCATGAACAGGGTGGCGGAGG  <  1:630524/149‑1                         ATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCACCACCACGATCACGACCACGACGGTTGCTGCGGCGGTCATGGCCACGATCA                          <  1:373897/101‑1                         ATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCACCACCACGATCACGACCACGACGGTTGCTGCGGCGGTCATGGCCACGATCA                          >  2:373897/1‑101                                                                                                                                                       CCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3477882‑3477954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcACCACCACGATCACGACCACGACGGTTGCTGCGGCGGTCATGGCCACGATCACGGTCATGAACACGGTGGCGAAGG  <  NC_000913/3478025‑3477950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.