| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4522063 | 65 (0.760) | 3 (0.040) | 3/242 | NT | 4.7% | intergenic (‑43/+64) | yjhF/yjhG | putative transporter/putative dehydratase |
| ? | NC_000913 | = 4522085 | 62 (0.800) | intergenic (‑65/+42) | yjhF/yjhG | putative transporter/putative dehydratase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGGCGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4521911‑4522063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attatccgactCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGT < NC_000913/4522085‑4521939 ATGGCGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCC < 4:72660/149‑1ATGGCGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCC < 3:543702/149‑1 TGGCGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGATTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCA < 4:264644/142‑1 TGGCGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCA > 3:264644/1‑142 CGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACT < 1:349336/149‑1 GACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACTC > 2:426160/1‑149 GTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGA < 1:426160/149‑1 AAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTC > 2:111860/1‑116 AAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACTCTGCATCATTCGTTATTTGCTCAGTC < 1:111860/116‑1 TTATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATACAAATTAAGCTTAATACGTT < 4:554818/149‑1 TATCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTT < 2:468891/149‑1 TCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGT < 4:688788/149‑1 TCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTT < 2:520415/119‑1 TCCGACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTT > 1:520415/1‑119 GACTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTC < 1:37501/149‑1 CTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGT < 2:695482/149‑1 CTCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGT < 3:60558/149‑1 ATGGCGACAGCAATCGAGACAATAATTAACGAAACAAACGTATTAAGCTTAATTTTTATGGTTAAAAGCAGGAGTAAAGCAATCCCTGCCACAACGATAATTAGTGGCATAACGTCCTCTCATAACAGGGTAGCGACCCATCATTATCCGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4521911‑4522063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attatccgactCTGCATCATTCGTTATTTGCTCAGTCGGATAATGATGGGTCGCTACCCTGTTATGAGAGGACGTTATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGT < NC_000913/4522085‑4521939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |