Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 3,993,337 Δ11 bp 100% coding (2185‑2195/2547 nt) cyaA → adenylate cyclase

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3993337 3993347 11 100 [0] [0] 99 cyaA adenylate cyclase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 39933360 (0.000)90 (1.060) 69/264 NT 100% coding (2184/2547 nt) cyaA adenylate cyclase
?NC_000913 3993348 = 0 (0.000)coding (2196/2547 nt) cyaA adenylate cyclase

TGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAATTACCGGCGGTGGTGGACGGCTTTGCCAGCGAAGGGATCATCCAGTTCTTTTTCGAAGAAACGCAAGACGAGAATGGCTTTAATATCTACATTCTCGACGAAAGCAACCGGGTTGAGGTATATCACCACTGCGAAGGCAGCAAAGAGG  >  NC_000913/3993188‑3993484
                                                                                                                                                    |                                                                                                                                                    
tGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCaaa                                                                                                                                                      <  4:247553/149‑1 (MQ=255)
   gcgTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggt                                                                                                                                                   <  4:607430‑M1/149‑4 (MQ=255)
     gTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtgg                                                                                                                                                 <  2:241514‑M1/149‑6 (MQ=255)
         cTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacgg                                                                                                                                             >  3:586748‑M1/1‑140 (MQ=255)
           ggTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggct                                                                                                                                           <  1:432321‑M1/149‑12 (MQ=255)
            gTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctt                                                                                                                                          >  2:318729‑M1/1‑137 (MQ=255)
            gTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctt                                                                                                                                          >  3:717284‑M1/1‑137 (MQ=255)
             tCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAtgtggacggcttt                                                                                                                                         >  4:517794‑M1/1‑136 (MQ=255)
             tCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggcttt                                                                                                                                         >  4:281213‑M1/1‑136 (MQ=255)
             tCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggcttt                                                                                                                                         <  1:390282‑M1/149‑14 (MQ=255)
             tCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggcttt                                                                                                                                         <  4:705565‑M1/149‑14 (MQ=255)
             tCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggcttt                                                                                                                                         <  1:165074‑M1/149‑14 (MQ=255)
             tCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtg                                                                                                                                                  <  3:741960‑M1/140‑5 (MQ=255)
             tCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtg                                                                                                                                                  >  4:741960‑M1/1‑136 (MQ=255)
               aaaCCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgc                                                                                                                                       >  1:202484‑M1/1‑134 (MQ=255)
               aaaCCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgc                                                                                                                                       <  4:499476‑M1/149‑16 (MQ=255)
                   cTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccag                                                                                                                                    >  3:23235‑M1/1‑130 (MQ=255)
                   cTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccag                                                                                                                                    <  4:23235‑M1/148‑19 (MQ=255)
                         gttgttCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtgggcggctttgccagcgaaggg                                                                                                                             <  3:598416‑M1/149‑26 (MQ=255)
                         gttgttCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaaggg                                                                                                                             <  4:505901‑M1/149‑26 (MQ=255)
                          ttgttCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaaggga                                                                                                                            <  1:394199‑M1/149‑27 (MQ=255)
                          ttgttCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaaggga                                                                                                                            <  4:276975‑M1/149‑27 (MQ=255)
                            gttCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatc                                                                                                                          >  4:747366‑M1/1‑121 (MQ=255)
                            gttCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatc                                                                                                                          <  1:517162‑M1/149‑29 (MQ=255)
                                    aaCGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagtt                                                                                                                  >  1:572829‑M1/1‑113 (MQ=255)
                                       gCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctt                                                                                                               <  1:349073‑M1/149‑40 (MQ=255)
                                         cTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatc                                                                                                                          >  1:671723‑M1/1‑108 (MQ=255)
                                         cTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatc                                                                                                                          <  2:671723‑M1/136‑29 (MQ=255)
                                          tGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttcttttt                                                                                                            <  4:239358‑M1/149‑43 (MQ=255)
                                          tGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttcttttt                                                                                                            <  3:709518‑M1/149‑43 (MQ=255)
                                            aaTGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTTAAAggtggacggctttgccagcgaagggatcatccagttctttttcg                                                                                                          <  3:517794‑M1/149‑45 (MQ=255)
                                              tGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaa                                                                                                        <  2:707889‑M1/149‑47 (MQ=255)
                                              tGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaa                                                                                                        <  4:54419‑M1/149‑47 (MQ=255)
                                              tGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaa                                                                                                        <  4:216759‑M1/149‑47 (MQ=255)
                                                  tCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaa                                                                                                    <  4:510074‑M1/149‑51 (MQ=255)
                                                  tCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggaacatccagttctttttcgaagaaa                                                                                                    <  4:355794‑M1/149‑51 (MQ=255)
                                                     gTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTAAAACCAATCACGTCAAAg                                                                                                                                                     >  3:596515‑M1/1‑96 (MQ=255)
                                                     gTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTAAAACCAATCACGTCAAAg                                                                                                                                                     <  4:596515‑M1/97‑2 (MQ=255)
                                                       aCAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaa                                                                                               >  3:430807‑M1/1‑94 (MQ=255)
                                                       aCAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaa                                                                                               <  2:693130‑M1/149‑56 (MQ=255)
                                                         aGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaaga                                                                                             >  4:24305‑M1/1‑92 (MQ=255)
                                                         aGAAACTAGAAAACGCAATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGCAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaaga                                                                                             <  4:558235‑M1/149‑58 (MQ=255)
                                                          gAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagac                                                                                            <  2:572829‑M1/149‑59 (MQ=255)
                                                           aaaCTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacg                                                                                           >  1:591605‑M1/1‑90 (MQ=255)
                                                           aaaCTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaaggga                                                                                                                            <  3:588150‑M1/116‑27 (MQ=255)
                                                           aaaCTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaaggga                                                                                                                            >  4:588150‑M1/1‑90 (MQ=255)
                                                              cTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgaga                                                                                        >  4:189247‑M1/1‑87 (MQ=255)
                                                               tGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggct                                                                                                                                           >  2:64087‑M1/1‑86 (MQ=255)
                                                               tGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggct                                                                                                                                           <  1:64087‑M1/97‑12 (MQ=255)
                                                                ggAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaat                                                                                      >  1:324669‑M1/1‑85 (MQ=255)
                                                                 gAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatg                                                                                     >  2:152299‑M1/1‑84 (MQ=255)
                                                                  aaaaCGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatgg                                                                                    >  2:465728‑M1/1‑83 (MQ=255)
                                                                     aCGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctt                                                                                 <  2:695361‑M1/149‑70 (MQ=255)
                                                                      cGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggcttt                                                                                <  1:152299‑M1/149‑71 (MQ=255)
                                                                        ccATCGAGTTTTATGGCTCGATTTCGCATAACAAGCTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaa                                                                              <  1:72098‑M1/149‑73 (MQ=255)
                                                                        ccATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaa                                                                              <  1:318729‑M1/149‑73 (MQ=255)
                                                                         cATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaat                                                                             <  1:560958‑M1/149‑74 (MQ=255)
                                                                                ttttATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctaca                                                                      >  1:695780‑M1/1‑69 (MQ=255)
                                                                                        cgcgATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgac                                                              >  2:540762‑M1/1‑61 (MQ=255)
                                                                                           gATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaa                                                           <  3:592595‑M1/149‑92 (MQ=255)
                                                                                            aTTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaa                                                          <  4:714027‑M1/149‑93 (MQ=255)
                                                                                            aTTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaa                                                          <  3:747366‑M1/149‑93 (MQ=255)
                                                                                             tttCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaag                                                         >  4:11014‑M1/1‑56 (MQ=255)
                                                                                                 gCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaac                                                     <  3:281213‑M1/149‑98 (MQ=255)
                                                                                                 gCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaac                                                     >  4:525135‑M1/1‑52 (MQ=255)
                                                                                                 gCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattc                                                                   <  1:179515‑M1/135‑84 (MQ=255)
                                                                                                 gCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattc                                                                   >  2:179515‑M1/1‑52 (MQ=255)
                                                                                                   aTAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaa                                                          >  1:131363‑M1/1‑50 (MQ=255)
                                                                                                   aTAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaa                                                          <  2:131363‑M1/142‑93 (MQ=255)
                                                                                                    tAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgg                                                  <  2:528835‑M1/149‑101 (MQ=255)
                                                                                                     aaCAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccggg                                                 <  2:560256‑M1/149‑102 (MQ=255)
                                                                                                       cAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggtt                                               >  1:757374‑M1/1‑46 (MQ=255)
                                                                                                       cAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctc                                                                 >  3:663650‑M1/1‑46 (MQ=255)
                                                                                                       cAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctc                                                                 <  4:663650‑M1/131‑86 (MQ=255)
                                                                                                        aaaCTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttg                                              >  2:735905‑M1/1‑45 (MQ=255)
                                                                                                         aaCTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttga                                             <  1:25406‑M1/149‑106 (MQ=255)
                                                                                                            tGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggt                                          <  4:294652‑M1/149‑109 (MQ=255)
                                                                                                              cACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtat                                        <  2:324669‑M1/149‑111 (MQ=255)
                                                                                                               aCGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtata                                       <  4:27025‑M1/149‑112 (MQ=255)
                                                                                                                  gCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtgacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcac                                    >  3:654831‑M1/1‑35 (MQ=255)
                                                                                                                    cTGTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcacc                                  >  2:473625‑M1/1‑33 (MQ=255)
                                                                                                                      gTCAGTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcaccac                                <  3:227560‑M1/149‑119 (MQ=255)
                                                                                                                          gTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaa                                                                                       >  3:592773‑M1/1‑27 (MQ=255)
                                                                                                                          gTGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaa                                                                                       <  4:592773‑M1/90‑64 (MQ=255)
                                                                                                                           tGCAGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcaccactgcga                           >  1:382103‑M1/1‑26 (MQ=255)
                                                                                                                              aGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcaccactgcgaagg                        <  2:382103‑M1/149‑127 (MQ=255)
                                                                                                                              aGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaat                                                                                      <  4:720318‑M1/87‑65 (MQ=255)
                                                                                                                              aGGTTGAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaat                                                                                      >  3:720318‑M1/1‑23 (MQ=255)
                                                                                                                                   gAAACCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcaccactgcgaaggcagca                   >  1:768388‑M1/1‑18 (MQ=255)
                                                                                                                                      aCCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttt                                                                                                             >  2:153094‑M1/1‑15 (MQ=255)
                                                                                                                                      aCCAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttt                                                                                                             <  1:153094‑M1/56‑42 (MQ=255)
                                                                                                                                       ccAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcaccactgcgaaggcagcaaaga               <  2:143070‑M1/149‑136 (MQ=255)
                                                                                                                                       ccAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcaccactgcgaaggcagcaaaga               <  1:428781‑M1/149‑136 (MQ=255)
                                                                                                                                        cAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcaccactgcgaaggcagcaaagag              >  3:176933‑M1/1‑13 (MQ=255)
                                                                                                                                        cAATCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcaccactgcgaaggcagcaaagag              >  1:491100‑M1/1‑13 (MQ=255)
                                                                                                                                         aaTCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcaccactgcgaaggcagcaaagagg             >  2:460754‑M1/1‑12 (MQ=255)
                                                                                                                                          aTCACGTCAAAggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcaccactgcgaaggcagcaaagagga            <  2:757374‑M1/149‑139 (MQ=255)
                                                                                                                                                  aaaggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtagatcaccactgcgaaggcagcaaagaggagctggtac    <  4:717284‑M1/149‑147 (MQ=255)
                                                                                                                                                    aggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatgtcaccactgcgaaggcagcaaagaggagctggtacgt  <  1:506333‑M1/149‑149 (MQ=255)
                                                                                                                                                    aggtggacggctttgccagcgaagggatcatccagttctttttcgaagaaacgcaagacgagaatggctttaatatctacattctcgacgaaagcaaccgggttgaggtatatcaccactgcgaaggcagcaaagaggagctggtacgt  <  3:24305‑M1/149‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAATTACCGGCGGTGGTGGACGGCTTTGCCAGCGAAGGGATCATCCAGTTCTTTTTCGAAGAAACGCAAGACGAGAATGGCTTTAATATCTACATTCTCGACGAAAGCAACCGGGTTGAGGTATATCACCACTGCGAAGGCAGCAAAGAGG  >  NC_000913/3993188‑3993484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.