BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	349605 =	NA (NA)	5 (0.050)	5/246	NT	NA	noncoding (1/365 nt)	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
*	?	NC_000913	349637 =	NA (NA)	5 (0.050)	5/246	NT	NA	noncoding (33/365 nt)	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 138 total aligned reads displayed.

CGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAG  >  NC_000913/349457‑349752

  tcggatgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGcc                                                                                                                                                    <  3:560570‑M1/3‑1 (MQ=255)

     gatgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGCCTGa                                                                                                                                                 <  4:567786‑M1/6‑1 (MQ=255)

      atgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGCCTGa                                                                                                                                                 <  2:619415‑M1/6‑1 (MQ=255)

       aaGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGAt                                                                                                                                                <  2:363457/148‑1 (MQ=255)

           gTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGt                                                                                                                                            <  1:17416/148‑1 (MQ=255)

                  acacCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGAc                                                                                                                                    >  1:463605/1‑148 (MQ=255)

                    acCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGAcgcg                                                                                                                                 >  3:567786/1‑149 (MQ=255)

                      cttatccgacctacagttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtatGCCTGATGCGTCGC‑TGACGCGa                                                                                                                                <  2:967453‑M1/22‑1 (MQ=255)

                      cATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGa                                                                                                                                <  1:299766/148‑1 (MQ=255)

                         gCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACtt                                                                                                                             >  1:419482/1‑148 (MQ=255)

                            gACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATc                                                                                                                          <  2:648890/148‑1 (MQ=255)

                            gACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATc                                                                                                                          <  1:800699/148‑1 (MQ=255)

                            cgacctacagttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGCCTGATAAGTCGC‑TGACGCGACTTATCa                                                                                                                         >  4:474985‑M1/121‑149 (MQ=255)

                             aCCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCa                                                                                                                         <  1:899672/148‑1 (MQ=255)

                             aCCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAg                                                                                                                        <  4:126727/149‑1 (MQ=255)

                               ccGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGc                                                                                                                      >  3:57924/1‑149 (MQ=255)

                                cGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGc                                                                                                                      >  1:894003/1‑148 (MQ=255)

                                   aaCGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTa                                                                                                                   <  1:922204/148‑1 (MQ=255)

                                     cGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGTCAGCCGATGCCTGATAAGTCGC‑GTCAGCGACGCATCAGGcatcgg                                                                                                                 <  1:929057/148‑6 (MQ=37)

                                       aGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAg                                                                                                               >  1:390739/1‑148 (MQ=255)

                                         cTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTg                                                                                                            >  4:840727/1‑149 (MQ=255)

                                          tGTACGAAAGCATCAACTACGACCAGGACGAAGAGAAGCTCGACAACCTGTATGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTg                                                                                                            <  1:33217/148‑1 (MQ=255)

                                                aaaGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGa                                                                                                      >  1:43873/1‑148 (MQ=255)

                                                    cATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                 <  3:644799/149‑1 (MQ=255)

                                                     aTCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGc                                                                                                                                         <  4:206985/109‑1 (MQ=255)

                                                     aTCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGc                                                                                                                                         >  3:206985/1‑109 (MQ=255)

                                                       cAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAg                                                                                               >  2:245179/1‑148 (MQ=255)

                                                       cAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAg                                                                                               >  2:931463/1‑148 (MQ=255)

                                                         actactACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGt                                                                                             >  1:914802/1‑148 (MQ=255)

                                                          ctactaCCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCg                                                                                           >  3:260619/1‑149 (MQ=255)

                                                           tactacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCgg                                                                                          >  4:278609/1‑149 (MQ=255)

                                                            actacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGa                                                                                         <  3:912060/149‑1 (MQ=255)

                                                             ctacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGAt                                                                                        <  4:125136/149‑1 (MQ=255)

                                                               acCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATaa                                                                                      <  3:278609/149‑1 (MQ=255)

                                                               acCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATaa                                                                                      <  4:235041/149‑1 (MQ=255)

                                                                   gTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                 >  4:148733/1‑134 (MQ=255)

                                                                   gTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                 <  3:148733/134‑1 (MQ=255)

                                                                     aCGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACgg                                                                                 <  2:606610/148‑1 (MQ=255)

                                                                      cGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGa                                                                                <  1:6326/148‑1 (MQ=255)

                                                                       gAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATg                                                                              >  3:65139/1‑149 (MQ=255)

                                                                          gagaAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGAcg                                                                                                                                   <  1:907891/93‑1 (MQ=255)

                                                                          gagaAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCg                                                                           >  3:507685/1‑149 (MQ=255)

                                                                          gagaAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCg                                                                           >  4:90154/1‑149 (MQ=255)

                                                                            gaAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGATATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGt                                                                          <  1:71483/148‑1 (MQ=255)

                                                                            gaAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTc                                                                         <  3:479770/149‑1 (MQ=255)

                                                                                 tCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCAt                                                                     >  1:818759/1‑148 (MQ=255)

                                                                                    aCAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCg                                                                  >  1:430601/1‑148 (MQ=255)

                                                                                     cAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGa                                                                 >  1:583287/1‑148 (MQ=255)

                                                                                     cAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGa                                                                 <  2:143679/148‑1 (MQ=255)

                                                                                      aaCCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACa                                                               >  4:267626/1‑149 (MQ=255)

                                                                                       aCCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACa                                                               >  2:96879/1‑148 (MQ=255)

                                                                                       aCCTGATTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACa                                                               >  2:238004/1‑148 (MQ=255)

                                                                                        ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACaa                                                              <  2:729546/148‑1 (MQ=255)

                                                                                        ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAc                                                             <  3:867112/149‑1 (MQ=255)

                                                                                         cTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                                            >  3:924189/1‑149 (MQ=255)

                                                                                          tGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTGTCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCg                                                           >  4:762040/1‑149 (MQ=255)

                                                                                          tGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                                            >  1:175086/1‑148 (MQ=255)

                                                                                             ttGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATg                                                                                                                                                      >  2:886187/1‑56 (MQ=255)

                                                                                               gCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGc                                                       <  2:520118/148‑1 (MQ=255)

                                                                                                    tAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATg                                                 <  3:146942/149‑1 (MQ=255)

                                                                                                        cAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgcc                                             >  4:560570/1‑149 (MQ=255)

                                                                                                          ggTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                                           <  4:792266/149‑1 (MQ=255)

                                                                                                          ggTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccg                                            >  1:798300/1‑148 (MQ=255)

                                                                                                          ggTGAAATAAAAAACGCCCGTTCATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                                           <  3:762040/149‑1 (MQ=255)

                                                                                                           gTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCa                                                                                                                         >  1:372387/1‑70 (MQ=255)

                                                                                                           gTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCa                                                                                                                         <  2:372387/70‑1 (MQ=255)

                                                                                                            tGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTg                                         >  4:428717/1‑149 (MQ=255)

                                                                                                            tGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTg                                         >  4:622325/1‑149 (MQ=255)

                                                                                                             gAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                 >  3:734119/1‑92 (MQ=255)

                                                                                                                aTAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGt                                     >  4:570222/1‑149 (MQ=255)

                                                                                                                 tAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                                    >  4:854889/1‑149 (MQ=255)

                                                                                                                  aaaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                                    <  1:289129/148‑1 (MQ=255)

                                                                                                                  aaaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                                    <  2:914802/148‑1 (MQ=255)

                                                                                                                   cttatccgacctacagttcagtgcacctcgtagGCCTGATGCGTCGC‑TGACGCGACTTATCAg                                                                                                                        >  1:127093‑M1/34‑63 (MQ=255)

                                                                                                                   cttatccgacctacagttcagtgcacctcgtagGCCTGATGCGTCGC‑TGACGCGACTTATCAg                                                                                                                        <  2:127093‑M1/30‑1 (MQ=255)

                                                                                                                   aaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGa                                   <  1:309685/148‑1 (MQ=255)

                                                                                                                   aaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGa                                   >  2:309685/1‑148 (MQ=255)

                                                                                                                      aaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTa                               >  3:907406/1‑149 (MQ=255)

                                                                                                                       aCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTa                               >  1:696783/1‑148 (MQ=255)

                                                                                                                          cccGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGa                                        >  2:241158/1‑136 (MQ=255)

                                                                                                                          cccGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGa                                        <  1:241158/136‑1 (MQ=255)

                                                                                                                          cccGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCa                            <  1:931463/148‑1 (MQ=255)

                                                                                                                            cGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCgg                                                                                          >  1:583751/1‑84 (MQ=255)

                                                                                                                            cGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCgg                                                                                          <  2:583751/84‑1 (MQ=255)

                                                                                                                              ttGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGcc                        >  1:613055/1‑148 (MQ=255)

                                                                                                                                 aTTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTCTCAGGCCTAc                     >  2:910754/1‑148 (MQ=255)

                                                                                                                                   tGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACgg                   <  1:245179/148‑1 (MQ=255)

                                                                                                                                    gTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACggg                  >  1:553315/1‑148 (MQ=255)

                                                                                                                                        acGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTa                                                                                                                            >  2:770895/2‑38 (MQ=255)

                                                                                                                                         cGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCAc            <  4:101543/149‑1 (MQ=255)

                                                                                                                                          gACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                                  <  4:302878/126‑1 (MQ=255)

                                                                                                                                          gACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                                  >  3:302878/1‑126 (MQ=255)

                                                                                                                                           acctcgtagGCCTGATAAGTCGCGTCA‑GCGACGCATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTg          <  4:706382‑M1/140‑1 (MQ=255)

                                                                                                                                           aCAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACt           >  1:519169/1‑148 (MQ=255)

                                                                                                                                            cAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCt                                                     <  1:944771/105‑1 (MQ=255)

                                                                                                                                             aGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGaa        <  3:90154/149‑1 (MQ=255)

                                                                                                                                                 gATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGt    <  4:101342/149‑1 (MQ=255)

                                                                                                                                                  aTGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGt    <  2:818759/148‑1 (MQ=255)

                                                                                                                                                   tGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTa   <  1:61533/148‑1 (MQ=255)

                                                                                                                                                    GCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAg  >  2:430601‑M1/1‑148 (MQ=255)

CGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAG  >  NC_000913/349457‑349752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.