BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	349605 =	NA (NA)	5 (0.050)	5/246	NT	NA	noncoding (1/365 nt)	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
*	?	NC_000913	349637 =	NA (NA)	5 (0.050)	5/246	NT	NA	noncoding (33/365 nt)	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 136 total aligned reads displayed.

AACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGA  >  NC_000913/349492‑349782

aaCGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTa                                                                                                                                                 <  1:922204/148‑1 (MQ=255)

aaCGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTa                                                                                                                                                 <  2:74356/148‑1 (MQ=255)

    aGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAg                                                                                                                                             >  1:390739/1‑148 (MQ=255)

      cTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTg                                                                                                                                          >  4:840727/1‑149 (MQ=255)

       tGTACGAAAGCATCAACTACGACCAGGACGAAGAGAAGCTCGACAACCTGTATGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTg                                                                                                                                          <  1:33217/148‑1 (MQ=255)

          aCGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCAc                                                                                                                                       >  1:520118/1‑148 (MQ=255)

             aaaGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGaa                                                                                                                                   >  4:918128/1‑149 (MQ=255)

             aaaGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGaa                                                                                                                                   <  4:279682/149‑1 (MQ=255)

             aaaGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGa                                                                                                                                    >  1:43873/1‑148 (MQ=255)

                 cATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                                               <  3:644799/149‑1 (MQ=255)

                  aTCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                                               >  1:606610/1‑148 (MQ=255)

                  aTCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTa                                                                                                                              <  3:355391/149‑1 (MQ=255)

                    cAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAg                                                                                                                             >  2:931463/1‑148 (MQ=255)

                     aaCTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGt                                                                                                                           >  4:256615/1‑149 (MQ=255)

                       ctactaCCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCg                                                                                                                         >  3:260619/1‑149 (MQ=255)

                        tactacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCgg                                                                                                                        >  4:278609/1‑149 (MQ=255)

                        tactacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCg                                                                                                                         <  2:427639/148‑1 (MQ=255)

                         actacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGa                                                                                                                       <  3:912060/149‑1 (MQ=255)

                                gTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                                               >  4:148733/1‑134 (MQ=255)

                                  aCGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACgg                                                                                                               <  2:606610/148‑1 (MQ=255)

                                   cGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGa                                                                                                              <  1:6326/148‑1 (MQ=255)

                                     aaGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGACGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATg                                                                                                            >  1:927154/1‑148 (MQ=255)

                                      agagAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGc                                                                                                          >  3:635133/1‑149 (MQ=255)

                                       gagaAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCg                                                                                                         >  3:507685/1‑149 (MQ=255)

                                       gagaAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCg                                                                                                         >  4:90154/1‑149 (MQ=255)

                                         gaAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGATATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGt                                                                                                        <  1:71483/148‑1 (MQ=255)

                                         gaAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGt                                                                                                        >  2:543563/1‑148 (MQ=255)

                                          aaGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTc                                                                                                       >  1:963794/1‑148 (MQ=255)

                                              tCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCAt                                                                                                   >  2:634258/1‑148 (MQ=255)

                                                 aCAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCg                                                                                                >  1:430601/1‑148 (MQ=255)

                                                  cAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGa                                                                                               >  1:583287/1‑148 (MQ=255)

                                                    aCCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACa                                                                                             >  2:96879/1‑148 (MQ=255)

                                                    aCCTGATTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACa                                                                                             >  2:238004/1‑148 (MQ=255)

                                                     ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACaa                                                                                            <  2:729546/148‑1 (MQ=255)

                                                     ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACaa                                                                                            <  1:644588/148‑1 (MQ=255)

                                                      cTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                                                                          >  3:924189/1‑149 (MQ=255)

                                                       tGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTGTCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCg                                                                                         >  4:762040/1‑149 (MQ=255)

                                                       tGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                                                                          >  1:175086/1‑148 (MQ=255)

                                                            gCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGcc                                                                                    >  3:101342/1‑149 (MQ=255)

                                                            gCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGc                                                                                     <  2:520118/148‑1 (MQ=255)

                                                                gTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGAt                                                                                <  4:849969/149‑1 (MQ=255)

                                                                 tAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATg                                                                               <  3:146942/149‑1 (MQ=255)

                                                                     cAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgcc                                                                           >  4:560570/1‑149 (MQ=255)

                                                                       ggTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                                                                         <  4:792266/149‑1 (MQ=255)

                                                                       ggTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                                                                         >  3:876312/1‑149 (MQ=255)

                                                                       ggTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccg                                                                          >  1:798300/1‑148 (MQ=255)

                                                                       ggTGAAATAAAAAACGCCCGTTCATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                                                                         <  3:762040/149‑1 (MQ=255)

                                                                        gTGAAATAAAATACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCt                                                                        >  3:748168/1‑149 (MQ=255)

                                                                         tGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTg                                                                       >  4:428717/1‑149 (MQ=255)

                                                                         tGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTg                                                                       >  4:622325/1‑149 (MQ=255)

                                                                          gAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                                               >  3:734119/1‑92 (MQ=255)

                                                                          gAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                                               <  4:734119/92‑1 (MQ=255)

                                                                               aaaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                                                                  <  2:914802/148‑1 (MQ=255)

                                                                               aaaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                                                                  <  1:289129/148‑1 (MQ=255)

                                                                                aaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGa                                                                 >  2:309685/1‑148 (MQ=255)

                                                                                aaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                                                                <  3:918128/149‑1 (MQ=255)

                                                                                       cccGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGa                                                                      >  2:241158/1‑136 (MQ=255)

                                                                                       cccGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCa                                                          <  1:931463/148‑1 (MQ=255)

                                                                                         cGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCgg                                                                                                                        >  1:583751/1‑84 (MQ=255)

                                                                                             gATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTAc                                                   >  3:54764/1‑149 (MQ=255)

                                                                                              aTTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTCTCAGGCCTAc                                                   >  2:910754/1‑148 (MQ=255)

                                                                                                tGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACgg                                                 <  1:245179/148‑1 (MQ=255)

                                                                                                tGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACgg                                                 >  1:444163/1‑148 (MQ=255)

                                                                                                      cGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCAc                                          <  4:101543/149‑1 (MQ=255)

                                                                                                       gACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                                                                >  3:302878/1‑126 (MQ=255)

                                                                                                       gACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                                                                <  4:302878/126‑1 (MQ=255)

                                                                                                       gACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGCATGGCGTCGCATCCGACAACCGATGCCTGCTGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACt                                         >  4:141321/1‑149 (MQ=255)

                                                                                                        acctcgtagGCCTGATAAGTCGCGTCA‑GCGACGCATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTg                                        <  4:706382‑M1/140‑1 (MQ=255)

                                                                                                         cAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCt                                                                                   >  2:944771/1‑105 (MQ=255)

                                                                                                          aGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGaa                                      <  3:90154/149‑1 (MQ=255)

                                                                                                              gATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGt                                  <  4:101342/149‑1 (MQ=255)

                                                                                                               aTGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGt                                  <  2:818759/148‑1 (MQ=255)

                                                                                                                tGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTa                                 <  1:61533/148‑1 (MQ=255)

                                                                                                                tGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAg                                <  4:57924/149‑1 (MQ=255)

                                                                                                                 GCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAg                                >  2:430601‑M1/1‑148 (MQ=255)

                                                                                                                   CTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTc                             >  4:748168‑M1/1‑149 (MQ=255)

                                                                                                                   CTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGATGCACTGAACTGTAGGt                              >  2:12026‑M1/1‑148 (MQ=255)

                                                                                                                    ctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                                                                   >  1:127093‑M2/31‑63 (MQ=255)

                                                                                                                    ctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                                                                   <  2:127093‑M2/33‑1 (MQ=255)

                                                                                                                    TGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTc                             <  1:290796‑M1/148‑1 (MQ=255)

                                                                                                                    TGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTc                             >  1:193322‑M1/1‑148 (MQ=255)

                                                                                                                     tgataagtcgcgtcagcgacttatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCg                            >  4:474985‑M2/30‑149 (MQ=255)

                                                                                                                      ATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGa                          >  4:201813‑M1/1‑149 (MQ=255)

                                                                                                                           tCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAg                      <  2:894003/148‑1 (MQ=255)

                                                                                                                           tCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAg                      <  2:175086/148‑1 (MQ=255)

                                                                                                                             gC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGAc                    <  1:543563/148‑1 (MQ=255)

                                                                                                                                tGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGc                                            >  4:267606/1‑122 (MQ=255)

                                                                                                                                tGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGc                                            <  3:267606/122‑1 (MQ=255)

                                                                                                                                 gACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCAt                >  3:896248/1‑149 (MQ=255)

                                                                                                                                  aCGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATa               >  3:353254/1‑149 (MQ=255)

                                                                                                                                       aCTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGt           >  1:74747/1‑148 (MQ=40)

                                                                                                                                       aCTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTc          <  3:194940/149‑1 (MQ=255)

                                                                                                                                         ttATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGc        >  4:372177/1‑149 (MQ=40)

                                                                                                                                         ttATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGc        >  4:258667/1‑149 (MQ=39)

                                                                                                                                          tATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCACATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGc        >  1:889680/1‑148 (MQ=255)

                                                                                                                                            tcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCAt      <  2:619415‑M2/142‑1 (MQ=255)

                                                                                                                                            tcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATc     <  4:567786‑M2/143‑1 (MQ=255)

                                                                                                                                             caggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATc     <  1:318324‑M2/143‑1 (MQ=255)

                                                                                                                                               ggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGa  <  3:560570‑M2/146‑1 (MQ=255)

                                                                                                                                                gcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGa  >  1:907311‑M2/3‑148 (MQ=255)

AACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGC‑TGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGA  >  NC_000913/349492‑349782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.