New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 265229 =72 (0.930)4 (0.060) 4/248 NT 5.5% intergenic (‑23/+75) yafX/ykfF CP4‑6 prophage; uncharacterized protein/CP4‑6 prophage; uncharacterized protein
?NC_000913 265252 = 70 (0.960)intergenic (‑46/+52) yafX/ykfF CP4‑6 prophage; uncharacterized protein/CP4‑6 prophage; uncharacterized protein

Only 100 of 110 total aligned reads displayed.

TGCGGGATAGCGCCAAAGTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCT  >  NC_000913/265082‑265377
                                                                                                                                                   |                                                                                                                                                    
tGCGGGATAGCGCCAAAGTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAAC                                                                                                                                                     <  2:111665‑M1/149‑1 (MQ=255)
   gggATAGCGCCAAAGTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCC                                                                                                                                                  >  4:101581‑M1/1‑149 (MQ=255)
        aGCGCCAAAGTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAA                                                                                                                                                      >  4:412‑M1/1‑140 (MQ=255)
        aGCGCCAAAGTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAA                                                                                                                                                      <  3:412‑M1/140‑1 (MQ=255)
             cAAAGTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGAtg                                                                                                                                        >  2:262437/1‑149 (MQ=255)
                aGTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGgct                                                                                                                                     >  3:470603‑M2/1‑146 (MQ=255)
                aGTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGgct                                                                                                                                     >  1:343435‑M2/1‑146 (MQ=255)
                 gTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGgctg                                                                                                                                    >  2:209132‑M2/1‑145 (MQ=255)
                 gTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGgctg                                                                                                                                    >  4:518209‑M2/1‑145 (MQ=255)
                 gTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGgctg                                                                                                                                    >  4:173521‑M2/1‑145 (MQ=255)
                   aCTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGgctggc                                                                                                                                  >  3:642954‑M2/1‑143 (MQ=255)
                     tgtgGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGgctggcgt                                                                                                                                <  4:628666‑M2/149‑9 (MQ=255)
                       tgGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCcatcgccgctggcgttt                                                                                                                              <  4:406575‑M1/149‑18 (MQ=255)
                        ggCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATg                                                                                                                             <  2:598411/149‑1 (MQ=255)
                        cggatgccggtgaaggtcttaaccgctatatccgcacctcaggcatccgtacagacacggccacccgctgatcgcgaagcatttacccgcattcacctccccgaacacactttatatccccaaACGCCAGCGGCGATGGCTGGCGTATg                                                                                                                             >  4:373455‑M1/124‑149 (MQ=255)
                         ggatgccggtgaaggtcttaaccgctatatccgcacctaaggcatccgtacagacacggccacccgctgatcgcgaagcatttacccgcattcacctccccgaacacactttatatccccatACGCCAGCGGCGATGGCTGGCGTATgg                                                                                                                            >  3:438949‑M1/123‑149 (MQ=255)
                         gCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATgg                                                                                                                            <  4:523512/149‑1 (MQ=255)
                          ccAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATggg                                                                                                                           >  1:63388/1‑149 (MQ=255)
                           cAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATgggg                                                                                                                          >  1:653133/1‑149 (MQ=255)
                             gAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGat                                                                                                                        <  1:248455/149‑1 (MQ=255)
                                aTCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCcatcgccgctggcgttttta                                                                                                                           >  3:514976‑M1/1‑123 (MQ=255)
                                aTCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCcatcgccgctggcgttttta                                                                                                                           <  4:514976‑M1/143‑21 (MQ=255)
                                aTCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGGCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGAtata                                                                                                                     >  3:537264/1‑149 (MQ=255)
                                  cGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATaaa                                                                                                                   <  3:219912/149‑1 (MQ=255)
                                  cGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATaaa                                                                                                                   <  3:596837/149‑1 (MQ=255)
                                  cGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATaaa                                                                                                                   <  4:377223/149‑1 (MQ=255)
                                   gATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCcatcgccgctggcgtt                                                                                                                               >  3:16251‑M1/1‑120 (MQ=255)
                                   gATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCcatcgccgctggcgtt                                                                                                                               <  4:16251‑M1/136‑17 (MQ=255)
                                   gATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAg                                                                                                                  >  4:461464/1‑149 (MQ=255)
                                   gATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAg                                                                                                                  >  2:464836/1‑149 (MQ=255)
                                    aTACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAgt                                                                                                                 <  3:100806/149‑1 (MQ=255)
                                      aCGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAgtgt                                                                                                               <  4:520952/149‑1 (MQ=255)
                                        gCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAgtgtgt                                                                                                             >  4:83642/1‑149 (MQ=255)
                                        gCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAgtgtgt                                                                                                             <  3:243320/149‑1 (MQ=255)
                                             tCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCggg                                                                                                        <  1:121493/149‑1 (MQ=255)
                                             tCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCggg                                                                                                        <  1:243317/149‑1 (MQ=255)
                                                tCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAg                                                                                                     >  4:622049/1‑149 (MQ=255)
                                                tCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGGATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAg                                                                                                     <  3:410160/149‑1 (MQ=255)
                                                  ggggACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGt                                                                                                   <  2:262880/149‑1 (MQ=255)
                                                     gACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGaa                                                                                                <  2:556783/149‑1 (MQ=255)
                                                          gCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCgg                                                                                           <  1:600473/149‑1 (MQ=255)
                                                          gCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCgg                                                                                           <  1:458547/149‑1 (MQ=255)
                                                                  gTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGc                                                                                   >  2:185393/1‑149 (MQ=255)
                                                                       ttCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATgggg                                                                                                                          >  2:204092/1‑105 (MQ=255)
                                                                       ttCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATgggg                                                                                                                          <  1:204092/105‑1 (MQ=255)
                                                                       ttCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTcgc                                                                              >  2:645290/1‑149 (MQ=255)
                                                                       ttCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTcgc                                                                              >  3:235302/1‑149 (MQ=255)
                                                                         cAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGa                                                                            <  3:628666/149‑1 (MQ=255)
                                                                          aaaTTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGAt                                                                           <  3:280399/149‑1 (MQ=255)
                                                                            aTTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCa                                                                         >  4:497082/1‑149 (MQ=255)
                                                                                gggTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCgg                                                                     <  4:167603/149‑1 (MQ=255)
                                                                                gggTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCgg                                                                     <  1:464836/149‑1 (MQ=255)
                                                                                gggTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCgg                                                                     <  1:628067/149‑1 (MQ=255)
                                                                                gggTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCgg                                                                     <  1:262437/149‑1 (MQ=255)
                                                                                  gttggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGTGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATgg                                                                                                                            >  3:56369/1‑92 (MQ=255)
                                                                                  gttggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCcatcgccgctgg                                                                                                                                   >  1:662822‑M1/1‑73 (MQ=255)
                                                                                  gttggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCcatcgccgctgg                                                                                                                                   <  2:662822‑M1/85‑13 (MQ=255)
                                                                                  gttggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATTGCTGGCGTATgg                                                                                                                            <  4:56369/92‑1 (MQ=255)
                                                                                  gttggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGt                                                                   <  1:185393/149‑1 (MQ=255)
                                                                                  gttggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGt                                                                   <  3:546581/149‑1 (MQ=255)
                                                                                     ggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGc                                                                >  3:438871/1‑149 (MQ=255)
                                                                                      gttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGcc                                                               <  1:341802/149‑1 (MQ=255)
                                                                                      gttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGcc                                                               <  4:82052/149‑1 (MQ=255)
                                                                                        tAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCgt                                                             <  1:126684/149‑1 (MQ=255)
                                                                                             ggTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTg                                                        >  2:190544/1‑149 (MQ=255)
                                                                                                  gAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACgg                                                   >  4:108628/1‑149 (MQ=255)
                                                                                                        gTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCt                                             >  1:337331/1‑149 (MQ=255)
                                                                                                           ctgcGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAg                                          <  1:645290/149‑1 (MQ=255)
                                                                                                               gTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGc                                      >  1:661180/1‑149 (MQ=255)
                                                                                                                  tgtgTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGa                                   <  3:101581/149‑1 (MQ=255)
                                                                                                                  tgtgTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGa                                   <  4:140829/149‑1 (MQ=255)
                                                                                                                   gtgtTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGat                                  <  3:546500/149‑1 (MQ=255)
                                                                                                                    tgttgtCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGata                                 >  3:541604/1‑149 (MQ=255)
                                                                                                                           aTGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGt                          <  1:190544/149‑1 (MQ=255)
                                                                                                                                 aTGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGAc                    <  1:256301/149‑1 (MQ=255)
                                                                                                                                 aTGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGAc                    <  3:622049/149‑1 (MQ=255)
                                                                                                                                    tctcCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCtt                 >  1:91763/1‑149 (MQ=255)
                                                                                                                                      tttatatccccatACGCCAGCCATCGCCGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCgg                           >  3:291421‑M1/14‑137 (MQ=255)
                                                                                                                                      tcCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCa               >  4:280138/1‑149 (MQ=255)
                                                                                                                                      tcCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCa               >  3:515194/1‑149 (MQ=255)
                                                                                                                                       ccGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCAc              <  4:495233/149‑1 (MQ=255)
                                                                                                                                        cGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGACCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCAcc             >  3:92810/1‑149 (MQ=255)
                                                                                                                                         gTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGc                                               <  3:369472/114‑1 (MQ=255)
                                                                                                                                         gTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGc                                               >  4:369472/1‑114 (MQ=255)
                                                                                                                                          tCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAGGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCgg           >  3:223059/1‑149 (MQ=255)
                                                                                                                                              tAAAAACGCCAGCGGCGATGgctggcgtttttattgacggagacatacccatgacaacacagacgcagcacgacctcgcacccgctaaccaacccgaatttgaactgaccgtcacgccggtccccgatgaacagcgtatcgat             >  3:514976‑M2/1‑20 (MQ=255)
                                                                                                                                                aaaaCGCCAGCGGCGATGGCTGGCGTtttttattcacggagacatacccatgacaacacagacacagtacgacctcgtacccgctaacggatccgaatttgagttgagcgtaacgcaggtacccgatgaacagcatatccgcttctggc     >  1:262015‑M1/1‑26 (MQ=255)
                                                                                                                                                aaaaCGCCAGCGGCGATGGCTGGCGTtttttattcacggagacatacccatgacaacacagacacagtacgacctcgtacccgctaacggatccgaatttgagttgagcgtaacgcaggtacccgatgaacagcatatccgcttctggc     >  1:51045‑M1/1‑26 (MQ=255)
                                                                                                                                                aaaaCGCCAGCGGCGATGGCTGGCGTtttttattcacggagacatacccatgacaacacagacacagtacgacctcgtacccgctaacggatccgaatttgagttgagcgtaacgcagatacccgatgaacagcatatccgcttctgac     >  3:555314‑M1/1‑26 (MQ=255)
                                                                                                                                                 aaaCGCCAGCGGCGATGgctggcgtttttattgacggagacatacccatgacaacacagacgcagcacgacctcgcacccgctaaccaacccgaatttgaactgaccgtcacgccggtccccgatgaacagcgtatcgatttctggcca    <  4:406575‑M2/149‑133 (MQ=255)
                                                                                                                                                 aaaCGCCAGCGGCGATGGCTGGCGTtttttattcacggagacatacccatgacaacacagacacagtacgacctcgtaccc                                                                        >  4:154894‑M1/1‑25 (MQ=255)
                                                                                                                                                 aaaCGCCAGCGGCGATGGCTGGCGTtttttattcacggagacatacccatgacaacacagacacagtacgacctcgtaccc                                                                        <  3:154894‑M1/81‑57 (MQ=255)
                                                                                                                                                 aaaCGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCgg    >  2:615417/1‑149 (MQ=255)
                                                                                                                                                  aaCGCCAGCGGCGATGgctggcgtttttattgacggagacatacccatgacaacacagacgcagcacgacctcgcacccgctaaccaacccgaatttgaactgaccgtcacgccggtccccgatgaacagcgtatc                <  4:16251‑M2/136‑121 (MQ=255)
                                                                                                                                                  aaCGCCAGCGGCGATGgctggcgtttttattgacggagacatacccatgacaacacagacgcagcacgacctcgcacccgctaaccaacccgaatttgaactgaccgtcacgccggtccccgatgaacagcgtatc                >  3:16251‑M2/1‑16 (MQ=255)
                                                                                                                                                  aaCGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGc   <  2:63388/149‑1 (MQ=255)
                                                                                                                                                   aCGCCAGCcatcgccgctggcgtttttattgacggagacatacccatgacaacacagacgcagcacgacctcgcacccgctaaccaacccgaatttgaactgaccgtcacgccggtccccgatgaacagcgtatcgatttctggccaca  <  4:628666‑M1/149‑142 (MQ=255)
                                                                                                                                                   aCGCCAGCGGCGATGGCTGGCGTtttttattcacggagacatacccatgacaacacagacacagtacgacctcgtacccgctaac                                                                  <  1:445223‑M1/85‑63 (MQ=255)
                                                                                                                                                   aCGCCAGCGGCGATGGCTGGCGCtttttattcacggagacatacccatgacaacacagacacagtacgacctcgtacccgctacc                                                                  >  2:445223‑M1/1‑23 (MQ=255)
                                                                                                                                                   ACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCt  <  4:671139‑M1/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TGCGGGATAGCGCCAAAGTACTGTGGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCT  >  NC_000913/265082‑265377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.