New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	265229 =	72 (0.930)	4 (0.060)	4/248	NT	5.5%	intergenic (‑23/+75)	yafX/ykfF	CP4‑6 prophage; uncharacterized protein/CP4‑6 prophage; uncharacterized protein
	?	NC_000913	265252 =	70 (0.960)					intergenic (‑46/+52)	yafX/ykfF	CP4‑6 prophage; uncharacterized protein/CP4‑6 prophage; uncharacterized protein

GGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCAT  >  NC_000913/265106‑265388                                                                                                                                                   |                                                                                                                                         ggCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATg                                                                                                                                        <  2:598411/149‑1 (MQ=255) cggatgccggtgaaggtcttaaccgctatatccgcacctcaggcatccgtacagacacggccacccgctgatcgcgaagcatttacccgcattcacctccccgaacacactttatatccccaaACGCCAGCGGCGATGGCTGGCGTATg                                                                                                                                        >  4:373455‑M1/124‑149 (MQ=255)  ggatgccggtgaaggtcttaaccgctatatccgcacctaaggcatccgtacagacacggccacccgctgatcgcgaagcatttacccgcattcacctccccgaacacactttatatccccatACGCCAGCGGCGATGGCTGGCGTATgg                                                                                                                                       >  3:438949‑M1/123‑149 (MQ=255)  gCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATgg                                                                                                                                       <  4:523512/149‑1 (MQ=255)   ccAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATggg                                                                                                                                      >  1:63388/1‑149 (MQ=255)    cAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATgggg                                                                                                                                     >  1:653133/1‑149 (MQ=255)      gAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGat                                                                                                                                   <  1:248455/149‑1 (MQ=255)         aTCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGGCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGAtata                                                                                                                                >  3:537264/1‑149 (MQ=255)           cGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATaaa                                                                                                                              <  3:596837/149‑1 (MQ=255)           cGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATaaa                                                                                                                              <  3:219912/149‑1 (MQ=255)           cGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATaaa                                                                                                                              <  4:377223/149‑1 (MQ=255)            gATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAg                                                                                                                             >  2:464836/1‑149 (MQ=255)            gATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAg                                                                                                                             >  4:461464/1‑149 (MQ=255)             aTACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAgt                                                                                                                            <  3:100806/149‑1 (MQ=255)               aCGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAgtgt                                                                                                                          <  4:520952/149‑1 (MQ=255)               aCGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAgtgt                                                                                                                          <  1:635488/149‑1 (MQ=255)                 gCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAgtgtgt                                                                                                                        >  3:82052/1‑149 (MQ=255)                 gCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAgtgtgt                                                                                                                        <  3:243320/149‑1 (MQ=255)                 gCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAgtgtgt                                                                                                                        >  4:83642/1‑149 (MQ=255)                   tGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTc                                                                                                                      >  1:28823/1‑149 (MQ=255)                      tCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCggg                                                                                                                   <  1:121493/149‑1 (MQ=255)                      tCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCggg                                                                                                                   <  1:243317/149‑1 (MQ=255)                       ccgctatatccgcacctcaggcatccgtacagacacggccacccgctgatcgcgaagcatttacccgcattcacctccccgaacacactttatatccccatacgccagcggcgatggctggcgtATGGGGATATaaa                                                                                                                              >  3:291421‑M2/125‑137 (MQ=255)                       ccgctatatccgcacctcaggcatccgtacagacacggccacccgctgatcgcgaagcatttacccgcattcacctccccgaacacactttatatccccatacgccagcggcgatggctggcgtATGGGGATATaaa                                                                                                                              <  4:291421‑M2/13‑1 (MQ=255)                         tCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAg                                                                                                                >  4:622049/1‑149 (MQ=255)                         tCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGGATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAg                                                                                                                <  3:410160/149‑1 (MQ=255)                           ggggACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGt                                                                                                              <  2:262880/149‑1 (MQ=255)                              gACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGaa                                                                                                           <  2:556783/149‑1 (MQ=255)                                   gCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCgg                                                                                                      <  1:458547/149‑1 (MQ=255)                                   gCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCgg                                                                                                      <  1:600473/149‑1 (MQ=255)                                           gTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGc                                                                                              >  2:185393/1‑149 (MQ=255)                                                ttCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATgggg                                                                                                                                     <  1:204092/105‑1 (MQ=255)                                                ttCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATgggg                                                                                                                                     >  2:204092/1‑105 (MQ=255)                                                ttCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTcgc                                                                                         >  3:235302/1‑149 (MQ=255)                                                ttCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTcgc                                                                                         >  2:645290/1‑149 (MQ=255)                                                  cAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGa                                                                                       <  3:628666/149‑1 (MQ=255)                                                   aaaTTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGAt                                                                                      <  3:280399/149‑1 (MQ=255)                                                     aTTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCa                                                                                    >  4:497082/1‑149 (MQ=255)                                                      ttCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAg                                                                                   >  2:234502/1‑149 (MQ=255)                                                         gggTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCgg                                                                                <  1:262437/149‑1 (MQ=255)                                                         gggTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCgg                                                                                <  4:167603/149‑1 (MQ=255)                                                         gggTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCgg                                                                                <  1:464836/149‑1 (MQ=255)                                                         gggTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCgg                                                                                <  1:628067/149‑1 (MQ=255)                                                           gttggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGTGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATgg                                                                                                                                       >  3:56369/1‑92 (MQ=255)                                                           gttggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATTGCTGGCGTATgg                                                                                                                                       <  4:56369/92‑1 (MQ=255)                                                           gttggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGt                                                                              <  3:546581/149‑1 (MQ=255)                                                           gttggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGt                                                                              <  1:185393/149‑1 (MQ=255)                                                              ggttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGc                                                                           >  3:438871/1‑149 (MQ=255)                                                               gttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGcc                                                                          <  4:82052/149‑1 (MQ=255)                                                               gttAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGcc                                                                          <  1:341802/149‑1 (MQ=255)                                                                 tAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCgt                                                                        <  1:126684/149‑1 (MQ=255)                                                                     gggTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCt                                                                    <  3:287646/149‑1 (MQ=255)                                                                      ggTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTg                                                                   >  2:190544/1‑149 (MQ=255)                                                                           gAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACgg                                                              >  4:108628/1‑149 (MQ=255)                                                                                 gTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCt                                                        >  1:337331/1‑149 (MQ=255)                                                                                    ctgcGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAg                                                     <  1:645290/149‑1 (MQ=255)                                                                                        gTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGc                                                 >  1:661180/1‑149 (MQ=255)                                                                                           tgtgTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGa                                              <  3:101581/149‑1 (MQ=255)                                                                                           tgtgTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGa                                              <  4:140829/149‑1 (MQ=255)                                                                                            gtgtTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGat                                             <  3:546500/149‑1 (MQ=255)                                                                                             tgttgtCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGata                                            >  3:541604/1‑149 (MQ=255)                                                                                                   cATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCgg                                      <  4:85452/149‑1 (MQ=255)                                                                                                    aTGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGt                                     <  1:190544/149‑1 (MQ=255)                                                                                                          aTGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGAc                               <  1:256301/149‑1 (MQ=255)                                                                                                          aTGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGAc                               <  3:622049/149‑1 (MQ=255)                                                                                                             tctcCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCtt                            >  1:91763/1‑149 (MQ=255)                                                                                                               tttatatccccatACGCCAGCCATCGCCGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCgg                                      <  4:291421‑M1/124‑1 (MQ=255)                                                                                                               tttatatccccatACGCCAGCCATCGCCGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCgg                                      >  3:291421‑M1/14‑137 (MQ=255)                                                                                                               tcCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCa                          >  4:280138/1‑149 (MQ=255)                                                                                                               tcCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCa                          >  3:515194/1‑149 (MQ=255)                                                                                                                ccGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCAc                         <  4:495233/149‑1 (MQ=255)                                                                                                                 cGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGACCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCAcc                        >  3:92810/1‑149 (MQ=255)                                                                                                                  gTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGc                                                          >  4:369472/1‑114 (MQ=255)                                                                                                                  gTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGc                                                          <  3:369472/114‑1 (MQ=255)                                                                                                                  gTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCg                       >  2:97578/1‑149 (MQ=255)                                                                                                                   tCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAGGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCgg                      >  3:223059/1‑149 (MQ=255)                                                                                                                        ccatacgccagccatcgccgctggcgtATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTTAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATcc                 >  3:438949‑M2/28‑149 (MQ=255)                                                                                                                         catacgccagccatcgccgctggcgtTTGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCg                >  4:373455‑M2/27‑149 (MQ=255)                                                                                                                          aaaCGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCgg               >  2:615417/1‑149 (MQ=255)                                                                                                                           aaCGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGc              <  2:63388/149‑1 (MQ=255)                                                                                                                            ACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCt             <  4:671139‑M1/149‑1 (MQ=255)                                                                                                                                CAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCaaa         >  4:391843‑M1/1‑149 (MQ=255)                                                                                                                                CAGCGGCGATCGCTGGTGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGAATGCCTGAGGTGCGGATATACCGGTTAAGACCTTCACCGGCATCCGGCTCaaa         >  4:583795‑M1/1‑149 (MQ=255)                                                                                                                                    ggcgATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTc     <  2:476217/149‑1 (MQ=255)                                                                                                                                     gcgATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTcc    <  1:332066/149‑1 (MQ=255)                                                                                                                                     gcgATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTcc    <  2:91763/149‑1 (MQ=255)                                                                                                                                       gATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCAt  >  2:161175/1‑149 (MQ=255)                                                                                                                                       gATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCAt  >  4:159791/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                         GGCCAGAAATCGATACGCTGTTCATCGGGGACCGGCGTGACGGTCAGTTCAAATTCGGGTTGGTTAGCGGGTGCGAGGTCGTGCTGCGTCTGTGTTGTCATGGGTATGTCTCCGTCAATAAAAACGCCAGCGGCGATGGCTGGCGTATGGGGATATAAAGTGTGTTCGGGGAGGTGAATGCGGGTAAATGCTTCGCGATCAGCGGGTGGCCGTGTCTGTACGGATGCCTGAGGTGCGGATATAGCGGTTAAGACCTTCACCGGCATCCGGCTCAAAGTTCCAT  >  NC_000913/265106‑265388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.