New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4534380 =95 (1.230)2 (0.030) 3/256 NT 2.2% intergenic (‑327/+50) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment
?NC_000913 4534391 = 88 (1.170)intergenic (‑338/+39) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment
Rejected: Frequency below/above cutoff threshold.

Only 100 of 104 total aligned reads displayed.

ATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGT  >  NC_000913/4534232‑4534523
                                                                                                                                                    |                                                                                                                                               
atatTAACACGTATTTATAGGAGCGATATGTGTCAGTAGAAAAAGTGTGACGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAGGGGCAGATGACACTCCCGGATGCATCTTGAAGTACGCCTGAAATGGCCTCAGCGGCtttt                                                                                                                                                 <  4:234377/149‑1 (MQ=255)
atatTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCtttt                                                                                                                                                 <  1:528285/149‑1 (MQ=255)
atatTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCtttt                                                                                                                                                 >  2:234358/1‑149 (MQ=255)
 gagaacggtttttcactcatcaaagccggtgtgaatccggaaaataccctttcaaaaaaattacttatcaggattggcttcaatttttcaagcatcgaagatgggtgagcatatttatgttctggatttaacaaaaggagaataatctc                                                                                                                                                <  3:382733‑M1/2‑1 (MQ=255)
  atTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTcc                                                                                                                                               <  3:432207/149‑1 (MQ=255)
  agaacggtttttcactcatcaaagccggtgtgaatccggaaaataccctttcaaaaaaattacttatcaggattggcttcaatttttcaagcatcgaagatgggtgagcatatttatgttctggatttaacaaaaggagaataatcTcc                                                                                                                                               >  3:40641‑M1/147‑149 (MQ=255)
      acacGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTc                                                                                                                                           >  3:322826/1‑149 (MQ=255)
        acGTATTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCATCCCATTTACTGGAAAAGTCAGATGACACTAACGAATGCATGTTGAAGTACGCTTGAAATGGCCGCATCGGCTTTTCCCCTCgg                                                                                                                                         <  4:205440/149‑1 (MQ=255)
          gTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGga                                                                                                                                       <  2:657134/149‑1 (MQ=255)
              ttATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGatt                                                                                                                                   >  4:638323/1‑149 (MQ=255)
              ttATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGatt                                                                                                                                   <  4:424184/149‑1 (MQ=255)
                 taGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGattatt                                                                                                                                <  3:128536/149‑1 (MQ=255)
                   ggaggGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATtct                                                                                                                              >  2:177993/1‑149 (MQ=255)
                    gaggGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCGACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATtctc                                                                                                                             <  4:24290/149‑1 (MQ=255)
                       ggATATGTTTCAGTAGACAAAGTGTGATGTACTTTGGAAATTGAATGCCTACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGTCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCtt                                                                                                                          <  4:575498/149‑1 (MQ=255)
                       ggATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCtt                                                                                                                          >  4:382733/1‑149 (MQ=255)
                       ggATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTAGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCtt                                                                                                                          <  1:458444/149‑1 (MQ=255)
                         atatGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCtttt                                                                                                                        >  2:64644/1‑149 (MQ=255)
                         atatGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCtttt                                                                                                                        <  1:479010/149‑1 (MQ=255)
                         atatGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCtttt                                                                                                                        <  4:645542/149‑1 (MQ=255)
                             gTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTa                                                                                                                    >  2:108047/1‑149 (MQ=255)
                               ttCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTaaa                                                                                                                  <  4:120857/149‑1 (MQ=255)
                                  aGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATcc                                                                                                               >  2:138784/1‑149 (MQ=255)
                                   gTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTCCGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCa                                                                                                              >  2:242747/1‑149 (MQ=255)
                                    tAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAg                                                                                                             <  1:510257/149‑1 (MQ=255)
                                    tAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAg                                                                                                             <  1:662255/149‑1 (MQ=255)
                                     aGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGa                                                                                                            >  4:225639/1‑149 (MQ=255)
                                      gAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGaa                                                                                                           >  1:428399/1‑149 (MQ=255)
                                       aaaaaGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAAc                                                                                                          >  2:561870/1‑149 (MQ=255)
                                             tgtgATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAat                                                                                                    <  4:349893/149‑1 (MQ=255)
                                             tgtgATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAat                                                                                                    >  2:416613/1‑149 (MQ=255)
                                                 aTGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGc                                                                                                >  3:397029/1‑149 (MQ=255)
                                                   gTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTc                                                                                              <  3:628194/149‑1 (MQ=255)
                                                      cTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCAcc                                                                                           >  3:351420/1‑149 (MQ=255)
                                                          ggAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATc                                                                                       >  2:159533/1‑149 (MQ=255)
                                                             aaTTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTc                                                                                    >  2:60327/1‑149 (MQ=255)
                                                             aaTTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTc                                                                                    >  4:151020/1‑149 (MQ=255)
                                                             aaTTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTc                                                                                    >  2:502154/1‑149 (MQ=255)
                                                              aTTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCg                                                                                   >  2:559871/1‑149 (MQ=255)
                                                               ttGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCAc                                                                                            <  1:189407/139‑1 (MQ=255)
                                                               ttGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCAc                                                                                            >  2:189407/1‑139 (MQ=255)
                                                                  aaTGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGc                                                                               <  2:678238/149‑1 (MQ=255)
                                                                  aaTGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGc                                                                               <  1:15692/149‑1 (MQ=255)
                                                                     gCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTg                                                                            >  1:182955/1‑149 (MQ=255)
                                                                       cAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGaa                                                                          >  1:293610/1‑149 (MQ=255)
                                                                       cAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGaa                                                                          >  3:238025/1‑149 (MQ=255)
                                                                       cAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGaa                                                                          >  4:242213/1‑149 (MQ=255)
                                                                           ccATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAAt                                                                      <  1:197508/149‑1 (MQ=255)
                                                                           ccATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAAt                                                                      <  4:470135/149‑1 (MQ=255)
                                                                           ccATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAAt                                                                      >  4:344988/1‑149 (MQ=255)
                                                                              tttACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGa                                                                   >  3:282352/1‑149 (MQ=255)
                                                                               ttACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGaa                                                                  <  4:473931/149‑1 (MQ=255)
                                                                                tACTTGAAAAGGCAGATGACCCTGACGAATGCATGTTGAAGTACGCCTTAAATGGCCTAATCTGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATACGCTCACCCAACTTCGATGCTTGAAAAATTGatg                                                                 <  4:68158/149‑3 (MQ=255)
                                                                                  cTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGcc                                                               >  2:478591/1‑149 (MQ=255)
                                                                                   tGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCa                                                              >  1:463631/1‑149 (MQ=255)
                                                                                      aaaaGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATc                                                           <  1:591366/149‑1 (MQ=255)
                                                                                      aaaaGGCAGATGACACTGACGAATGCATATTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAGTATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATc                                                           <  4:535688/149‑1 (MQ=255)
                                                                                       aaaGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATcc                                                          >  3:415589/1‑149 (MQ=255)
                                                                                        aaGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCTGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCt                                                         <  1:502154/149‑1 (MQ=255)
                                                                                        aaGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCt                                                         <  1:60327/149‑1 (MQ=255)
                                                                                        aaGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCt                                                         <  2:428399/149‑1 (MQ=255)
                                                                                        aaGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCt                                                         <  1:126397/149‑1 (MQ=255)
                                                                                           gCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGAt                                                      <  3:348305/149‑1 (MQ=255)
                                                                                           gCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGAt                                                      <  3:340328/149‑1 (MQ=255)
                                                                                             aGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAatat                                                                                                  <  3:369015/103‑1 (MQ=255)
                                                                                             aGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAatat                                                                                                  >  4:369015/1‑103 (MQ=255)
                                                                                                   cacTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAAtt                                              <  1:234358/149‑1 (MQ=255)
                                                                                                    acTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAAttt                                             >  1:15726/1‑149 (MQ=255)
                                                                                                      tGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGaa                                                                  >  2:475715/1‑126 (MQ=255)
                                                                                                      tGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGaa                                                                  <  1:475715/126‑1 (MQ=255)
                                                                                                      tGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAAttttt                                           >  2:238900/1‑149 (MQ=255)
                                                                                                        aCGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAAttttttt                                         <  3:456692/149‑1 (MQ=255)
                                                                                                        aCGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAAttttttt                                         <  3:539151/149‑1 (MQ=255)
                                                                                                          gAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGa                                       <  3:523084/149‑1 (MQ=255)
                                                                                                           aaTGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGaa                                      >  3:594718/1‑149 (MQ=255)
                                                                                                            aTGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGaaa                                     <  3:336592/149‑1 (MQ=255)
                                                                                                              gCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAgg                                   <  4:464946/149‑1 (MQ=255)
                                                                                                                  gTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTAt                               >  3:15206/1‑149 (MQ=255)
                                                                                                                   ttGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTAtt                              >  2:374325/1‑149 (MQ=255)
                                                                                                                         tACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCgg                        >  1:234705/1‑149 (MQ=255)
                                                                                                                              cTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTca                   >  4:309491/1‑149 (MQ=255)
                                                                                                                               tGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTcac                  <  1:522705/149‑1 (MQ=255)
                                                                                                                                gAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGaa                                                                                                           >  3:366661/1‑59 (MQ=255)
                                                                                                                                gAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGaa                                                                                                           <  4:366661/59‑1 (MQ=255)
                                                                                                                                gAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTcaca                 <  4:415589/149‑1 (MQ=255)
                                                                                                                                 aaaTGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCacac                <  1:108047/149‑1 (MQ=255)
                                                                                                                                    tGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCgg             >  4:141871/1‑149 (MQ=255)
                                                                                                                                     aaaaggagaataatcTCCCGAAGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCaa                                                             >  3:255905‑M1/16‑100 (MQ=255)
                                                                                                                                     aaaaggagaataatcTCCCGAAGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCaa                                                             <  4:255905‑M1/85‑1 (MQ=255)
                                                                                                                                      gCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCt           >  2:15645/1‑149 (MQ=255)
                                                                                                                                       ccTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCtt          <  1:238900/149‑1 (MQ=255)
                                                                                                                                         tCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTtg        >  3:8228/1‑149 (MQ=255)
                                                                                                                                         tCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTtg        >  4:343282/1‑149 (MQ=255)
                                                                                                                                         tCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTtg        >  1:588611/1‑149 (MQ=255)
                                                                                                                                           aTCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTtgat      >  3:349102/1‑149 (MQ=255)
                                                                                                                                            tCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGTTTtgat      <  2:496798/148‑1 (MQ=255)
                                                                                                                                            tCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTtgatg     <  4:322826/149‑1 (MQ=255)
                                                                                                                                            tCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTtgatg     >  4:287538/1‑149 (MQ=255)
                                                                                                                                            tCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTtgat      >  1:496798/1‑148 (MQ=255)
                                                                                                                                               taatcTCCCGAAGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGt  <  1:547440‑M1/144‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
ATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGT  >  NC_000913/4534232‑4534523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.