New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4384575 =	294 (1.050)	3 (0.010)	3/258	NT	1.0%	coding (737/1503 nt)	yjeM	putative transporter
	?	NC_000913	4384614 =	283 (1.050)					coding (776/1503 nt)	yjeM	putative transporter
Rejected: Frequency below/above cutoff threshold.

CATTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAGGTTAACGGAACCATTACTTAATACCTGCTGCCAGTTTGTGCTGACGCCCCATAAAAATATTGCCAGCGAATAACCGATTGAAATAACAATAGCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4384727‑4384575 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaTATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTCGCT  >  NC_000913/4384614‑4384761                                                                                                                                                                                                                                                                                                               CATTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAGGTTAACGGAACCATTACTTAATACCTGCTGCCAGTTTGTGCTGACGCCCCATAAAAATATTGCCAGCGAATAACCGATTGAAATAACAATAGCG                                                                                                                                                          >  1:59019/1‑149  ATTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAGGTTAACGGAACCATTACTTAATACCTGCTGCCAGTTTGTGCTGACGCCCCATAAAAATATTGCCAGCGAATAACCGATTGAAATAACAATAGCGG                                                                                                                                                         >  1:410962/1‑149  ATTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAGGTTAACGGAACCATTACTTAATACCTGCTGCCAGTTTGTGCTGACGCCCCATAAAAATATTGCCAGCGAATAACCGATTGAAATAACAATAGCGG                                                                                                                                                         >  2:1018657/1‑149   TTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAGGTTAACGGAACCATTACTTAATACCTGCTGCCAGTTTGTGCTGACGCCCCATAAAAATATTGCCAGCGAATAACCGATTGAAATAACAATAGCGGC                                                                                                                                                        <  2:736155/149‑1                                                                                                         CATAAAAATATTGCCAGCGAATAACCGATTGAAATAACAATAGCGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGAT                                                  >  4:190668/1‑149                                                                                                          ATAAAAATATTGCCAGCGAATAACCGATTGAAATAACAATAGCGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATG                                                 >  1:312193/1‑149                                                                                                            AAAAATATTGCCAGCGAATAACCGATTGAAATAACAATAGCGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAACAGCCTTGGGATGAC                                               <  3:190668/149‑1                                                                                                                                                     GGCAATATTTTTATGGGGCGTCAGCACAAAATGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTCGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGT      <  1:1621243/149‑1                                                                                                                                                      GCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTGATGGTTCCGTTAACCTCGGCAATATTCCCTACGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTC     <  4:27396/149‑1                                                                                                                                                      GCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTC     >  2:1012296/1‑149                                                                                                                                                      GCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATT‑CCTATGTGCTGATAAAAAGCCTTGGGATGACGCTGGGTAATTCACTGCATTTGTCACCTGCAGCGGCATTGTtg    >  3:1700340/1‑147                                                                                                                                                        AATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTCGC   >  2:14900/1‑149                                                                                                                                                        AATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTCGC   >  3:405816/1‑149                                                                                                                                                        AATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTCGC   >  4:1019562/1‑149                                                                                                                                                        AATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTCGC   >  4:1381062/1‑149                                                                                                                                                        AATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTCGC   >  4:2416934/1‑149                                                                                                                                                        AATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTCGC   >  4:675258/1‑149                                                                                                                                                        AATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTCGC   >  4:836195/1‑149                                                                                                                                                         ATATTTTTATGGGGCGTCAGCACAAACTGGCAGCTGGTATTAAGTAATGTTGCCGTTAACCTCGGCAATATTACCTATGTCCTGATGAAGAGCTTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTTAAGCGTCATTGTCGCT  >  4:750278/1‑149                                                                                                                                                                                                                                                                                                               CATTACCCAGCGTCATCCCAAGGCTCTTCATCAGCACATAGGTAATATTGCCGAGGTTAACGGAACCATTACTTAATACCTGCTGCCAGTTTGTGCTGACGCCCCATAAAAATATTGCCAGCGAATAACCGATTGAAATAACAATAGCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4384727‑4384575 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaTATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTCGCT  >  NC_000913/4384614‑4384761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.