New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1451561 =	123 (0.780)	6 (0.040)	6/248	NT	5.0%	intergenic (‑212/+36)	tynA/paaZ	tyramine oxidase, copper‑requiring/oxepin‑CoA hydrolase and 3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase
	?	NC_000913	1451587 =	112 (0.760)					intergenic (‑238/+10)	tynA/paaZ	tyramine oxidase, copper‑requiring/oxepin‑CoA hydrolase and 3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase

GGTCATTGCTAACTACGGGCTGGAAAGCTTGCGTTTTATCGAACCCGTAAAGCCAGGCGATACCATCCAGGTGCGTCTCACCTGTAAGCGCAAGACGCTGAAAAAACAGCGTAGCGCAGAAGAAAAACCAACAGGTGTGGTGGAATGGGCTGTAGAGGTATTCAATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGTTGCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1451837‑1451561 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgcccttCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTGATGCTGATTGAATACCTCTACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCAT  >  NC_000913/1451587‑1451853                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGTCATTGCTAACTACGGGCTGGAAAGCTTGCGTTTTATCGAACCCGTAAAGCCAGGCGATACCATCCAGGTGCGTCTCACCTGTAAGCGCAAGACGCTGAAAAAACAGCGTAGCGCAGAAGAAAAACCAACAGGTGTGGTGGAATGGGCTGTAGCGGTATTCAATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAAGCAGCACGGTGATTGTGTCGATTAATCGGTGAATGAAGAGCAAGGGCGAATAGTTGCC                                                                                                                                                                                                                                                                                >  1:130614/1‑274   TCATTGCTAACTACGGGCTGGAAAGCTTGCGTTTTATCGAACCCGTAAAGCCAGGCGATACCATCCAGGTGCGTCTCACCTGTAAGCGCAAGACGCTGAAAAAACAGCGTAGCGCAGAAGAAAAACCAACAGGTGTGGTGGAATGGGCTGTAGAGGTATTCAATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGTTGCCCTT                                                                                                                                                                                                                                                                             <  2:368830/275‑1                                                                                                                          GAAAAACCAACAGGTGTGGTGGAATGGGCTGTAGAGGTATTCAATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAG                                                                                                                                                                                                                                                                                     >  5:864452/1‑148                                                                                                                                CCAACAGGTGTGGTGGAATGGGCTGTAGAGGTATTCAATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGTTGCCC                                                                                                                                                                                                                                                                               <  6:864452/148‑1                                                                                                                                             TGGAATGGGCTGTAGAGGTATTCAATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGTTGCC                                                                                                                                                                                                                                                                                <  5:2741/134‑1                                                                                                                                             TGGAATGGGCTGTAGAGGTATTCAATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGTTGCC                                                                                                                                                                                                                                                                                >  6:2741/1‑134                                                                                                                                                                     ATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGTTGCCCT                                                                                                                                                                                                                                                                              <  8:718529/112‑1                                                                                                                                                                     ATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGTTGCCCT                                                                                                                                                                                                                                                                              >  7:718529/1‑112                                                                                                                                                                          CATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGT                                                                                                                                                                                                                                                                                    >  8:1019008/1‑101                                                                                                                                                                          CATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGT                                                                                                                                                                                                                                                                                    <  7:1019008/101‑1                                                                                                                                                                            TCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGT                                                                                                                                                                                                                                                                                    >  5:1112887/1‑99                                                                                                                                                                            TCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGT                                                                                                                                                                                                                                                                                    <  6:1112887/99‑1                                                                                                                                                                             CAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGT                                                                                                                                                                                                                                                                                    <  8:278342/98‑1                                                                                                                                                                             CAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGT                                                                                                                                                                                                                                                                                    >  7:278342/1‑98                                                                                                                                                                                                    AATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGTTGCC                                                                                                                                                                                                                                                                                <  8:943402/79‑1                                                                                                                                                                                                    AATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGTTGCC                                                                                                                                                                                                                                                                                >  7:943402/1‑79                                                                                                                                                                                                                                                           GAAGGGCAACGGCGAATAGTTGCCCTTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACA                                                                                                                                                                                                              >  6:167461/1‑90                                                                                                                                                                                                                                                           GAAGGGCAACGGCGAATAGTTGCCCTTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACA                                                                                                                                                                                                              <  5:167461/90‑1                                                                                                                                                                                                                                                              GGGCAACGGCGAATAGTTGCCCTTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCT                                                                                                                                                                                                                                        <  6:399283/61‑1                                                                                                                                                                                                                                                              GGGCAACGGCGAATAGTTGCCCTTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCT                                                                                                                                                                                                                                        >  5:399283/1‑61                                                                                                                                                                                                                                                               GGCAACGGCGAATAGTTGCCCTTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTG                                                                                                                                                                                              <  7:376041/102‑1                                                                                                                                                                                                                                                               GGCAACGGCGAATAGTTGCCCTTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTG                                                                                                                                                                                              >  8:376041/1‑102                                                                                                                                                                                                                                                                               TGCCCTTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTGATGCTGATTGAATACCTCTCCAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTACGCGCCTTGCGCTTACTGGTGTGACGCACCTGGCTGGTATCGCACGGCTTTACGGGTCTGATACAAAGCAAGCTTTCCACACCGTCNTTCACNNAGACCGCACCcaacccccccc  >  3:18180/1‑263                                                                                                                                                                                                                                                                               TGCCCTTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTGATGCTGATTGAATACCTCTACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTAC                                                                                                     >  4:512714/1‑175                                                                                                                                                                                                                                                                                  CCTTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAAT                                                                                                                                                                                                                 <  6:352352/64‑1                                                                                                                                                                                                                                                                                  CCTTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAAT                                                                                                                                                                                                                 >  5:352352/1‑64                                                                                                                                                                                                                                                                                   CTTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTGATGCTGATTGAATACCTCTACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGT                                                                                                 <  2:512715/175‑1                                                                                                                                                                                                                                                                                    TTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTGATGCTGATTGAATACCTCTACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGT                                                                                                                           <  6:302963/148‑1                                                                                                                                                                                                                                                                                    TTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTGATGCTGATTGAATACCTCTACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGT                                                                                                                           >  6:548731/1‑148                                                                                                                                                                                                                                                                                    TTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTGATGCTGATTGA                                                                                                                                                                                   >  6:257494/1‑92                                                                                                                                                                                                                                                                                    TTCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTGATGCTGATTGA                                                                                                                                                                                   <  5:257494/92‑1                                                                                                                                                                                                                                                                                     TCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTGATGCTGATTGAATACCTCTACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTT                                                                                                                          >  6:683083/1‑148                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGTCATTGCTAACTACGGGCTGGAAAGCTTGCGTTTTATCGAACCCGTAAAGCCAGGCGATACCATCCAGGTGCGTCTCACCTGTAAGCGCAAGACGCTGAAAAAACAGCGTAGCGCAGAAGAAAAACCAACAGGTGTGGTGGAATGGGCTGTAGAGGTATTCAATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAATCGGTGAATGAAGGGCAACGGCGAATAGTTGCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1451837‑1451561 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgcccttCATTCACCGATTAATCGACAAAATCACCGTGCTGCCTGGCCACCAGCGTCAGAATTGAATACAGCGCCACCGGGGTTTGATGCTGATTGAATACCTCTACAGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCAT  >  NC_000913/1451587‑1451853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.