BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3056971	127 (0.800)	13 (0.090)	11/250	NT	9.2%	noncoding (123/140 nt)	sibC	sRNA antisense regulator of toxic IbsC protein
*	?	NC_000913	= 3056979	138 (0.930)	13 (0.090)	11/250	NT	9.2%	noncoding (131/140 nt)	sibC	sRNA antisense regulator of toxic IbsC protein

Only 100 of 185 total aligned reads displayed.

CCCGTTGAAGAGTGGGATATCCCTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCA  >  NC_000913/3056724‑3057230

cccGTTGAAGAGTGGGATATCCCTCTTCCTGCGGGGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTa                                                                                                                                                                                                                                             <  4:132570/272‑1 (MQ=255)

   gTTGAAGAGGTGGATATCCCTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGcc                                                                                                                                                                                                                                        <  2:431958/274‑1 (MQ=255)

              ggATATCCCTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGctgccc                                                                                                                                                                                                                             >  2:386059/1‑274 (MQ=255)

                         ttCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCAATGCTGCCCTGCAATCGTaaa                                                                                                                                                                                                                 >  2:356287/1‑275 (MQ=255)

                                ggtggtTAACGCGTCGAAAGTCTGGGGGGGGTAAGGGCGTTACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCGAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGATTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGTGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCAt                                                                                                                                                                                                          <  4:356286/275‑1 (MQ=255)

                                            gTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGAGTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAAcaca                                                                                                                                                                                              <  2:64601/275‑1 (MQ=255)

                                              cGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACAAAAc                                                                                                                                                                                            >  1:8367/1‑275 (MQ=255)

                                                                                     cccTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTc                                                                                                                                                     >  4:285084/1‑275 (MQ=255)

                                                                                               cATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGa                                                                                                                                           >  4:470037/1‑275 (MQ=255)

                                                                                                    ttGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGCTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAACGTAGAATgcg                                                                                                                                      >  1:130785/1‑275 (MQ=255)

                                                                                                    ttGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTC                                                                                                                                                                                                                                                                     >  5:617361‑M1/1‑148 (MQ=255)

                                                                                                       tttttttGACCTAATTTTGTGGNNGAGGTNAAGGGAGGTTTTCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCaa                                                                                                                                   <  3:8367/271‑1 (MQ=255)

                                                                                                            ttGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCtt                                                                                                                                                                                                                                                                 <  7:293446/144‑1 (MQ=255)

                                                                                                              gACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTga                                                                                                                                                                                                                                                           >  8:402090‑M2/1‑146 (MQ=255)

                                                                                                               aCCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCaa                                                                                                                           <  2:470038/275‑1 (MQ=255)

                                                                                                                ccTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTGCTCCTTCAAGCCCTCaccgaagcgagg                                                                                                                                                                                                                                                         <  6:617361‑M1/148‑13 (MQ=255)

                                                                                                                  tAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCaccgaagcgagggc                                                                                                                                                                                                                                                       <  8:1004030‑M1/148‑15 (MQ=255)

                                                                                                                          tGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACCATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGNCTTTACCGTTACAGCTCCATGCTGCCCTGCCCTCGTAAATCCCCATTAAATAAACAAAACGCATTGACCTGACTNTTATATATTCTCTGGAGGAAAATCACAAAANNAAACACGAAACCCGGCCAAGGTTGGgaga                                                                                                                >  3:56259/1‑275 (MQ=255)

                                                                                                                                      agggAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTgaggg                                                                                                                                                                                                                                                        <  1:137532‑M2/127‑6 (MQ=255)

                                                                                                                                          aggaTTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCttt                                                                                                                                                                                                                                                    <  3:137532/127‑1 (MQ=255)

                                                                                                                                            gaTTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACggg                                                                                               >  2:527337/1‑274 (MQ=255)

                                                                                                                                             aTTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCa                                                                                             <  2:285085/275‑1 (MQ=255)

                                                                                                                                              ttGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCaccgaagcgagggc                                                                                                                                                                                                                                                       <  6:510270‑M1/120‑15 (MQ=255)

                                                                                                                                                   cctccCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATc                                                                                                                                                                                                                      >  6:117662/1‑148 (MQ=255)

                                                                                                                                                      ccccTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTgagg                                                                                                                                                                                                                                                         <  8:216069‑M2/110‑5 (MQ=255)

                                                                                                                                                         cTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTg                                                                                                                                                                                                                                                            <  8:423822‑M2/104‑2 (MQ=255)

                                                                                                                                                           gagaCTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATcc                                                                                                                                                                                                              >  8:309531/1‑148 (MQ=255)

                                                                                                                                                           gagaCTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGc                                                                               >  4:303954/1‑275 (MQ=255)

                                                                                                                                                            agaCTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCAt                                                                                                                                                                                                                       >  6:804207/1‑138 (MQ=255)

                                                                                                                                                                   ctgTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACaa                                                                                                                                                                                             >  3:6961/1‑157 (MQ=255)

                                                                                                                                                                      ttAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCCTGCTGCCCTGCCATCGTAAATCCCCATtaaataa                                                                                                                                                                                                   <  6:427154/148‑1 (MQ=255)

                                                                                                                                                                       taataaGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCg                                                                                                                                                                                                                                                                    >  5:1120694/1‑82 (MQ=255)

                                                                                                                                                                       taataaGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCa                                                                                                                                                                                         <  1:6961/157‑1 (MQ=255)

                                                                                                                                                                           aaaagagaaaaCTTATGAGTAACATTACAATCAGGAGGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCa                                                                  <  4:127627/264‑1 (MQ=255)

                                                                                                                                                                           aaGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaataaa                                                                                                                                                                                                  >  8:592772/1‑144 (MQ=255)

                                                                                                                                                                            aGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCaccgaagcgagggcttga                                                                                                                                                                                                                                                   >  6:733181‑M1/1‑76 (MQ=255)

                                                                                                                                                                                cTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATACAAAAACg                                                                                                 >  1:27113/1‑236 (MQ=255)

                                                                                                                                                                                    aaCTTATTCGTAACAATACACTCAGTATGATGACAAGTCGCGTCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGACGGCTTTACCGTTACAGCCNCATGCTNCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCa                                                                                             <  3:27113/236‑1 (MQ=255)

                                                                                                                                                                                    aaCTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCttt                                                                                                                                                                                                                                                    >  6:65879/1‑85 (MQ=255)

                                                                                                                                                                                     aCTTATGAGTAACAGTAAAATCAGTATGATGACAAGTCGCCTCACAACCCTTCTCCTTCAAGCCCTCGATTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAAGCCCCATTAAATAAACACACCGCATTGTTCTGACTTTGATTGATTTTCTGGAGCAGACTCGCAAAGTAGCATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAAt                                                      <  1:128988/274‑1 (MQ=255)

                                                                                                                                                                                        tATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCt                                                                                                                                                                                                                                                                  <  7:7491/67‑1 (MQ=255)

                                                                                                                                                                                        tATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGccc                                                                                                                                                                                                                                       <  6:831046/94‑1 (MQ=255)

                                                                                                                                                                                        tATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGccc                                                                                                                                                                                                                                       >  5:831046/1‑94 (MQ=255)

                                                                                                                                                                                        tATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTACCCTGCCATCGTAAATCCCCa                                                                                                                                                                                                           <  5:240515/122‑1 (MQ=255)

                                                                                                                                                                                             gTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCAtgctg                                                                                                                                                                                                                                >  6:226451/1‑96 (MQ=255)

                                                                                                                                                                                                 ccgTACAGACAGTATGATGACAAGTCGCATCAAAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACGGTTACAGCCCCATGCCGCCCCGCCATCGTAAATCCCCATTAAATAAACACAACGCGTTGACCCGACTGTGATTTATTTTACGGTGCAGACTCTCAAAGTAGCAGACGCAACTGGGCGACGGTGTGGAGAAGGGAAAAAAAAAAGGGCCAGCCAGCGACCTACCCGTCGATTTTCCCAGACGGGGAAGTCGCAcagaaaa                                          >  4:145753/3‑270 (MQ=255)

                                                                                                                                                                                                 cAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGAtt                                                                      >  2:127628/1‑246 (MQ=255)

                                                                                                                                                                                                  aGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCAt                                                                                                                                                                                                                       <  8:537026/100‑1 (MQ=255)

                                                                                                                                                                                                     aCAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaa                                                                                                                                                                                                       <  7:605999/113‑1 (MQ=255)

                                                                                                                                                                                                       aaTCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCa                                                                                                                                                                                                           >  7:66320/1‑107 (MQ=255)

                                                                                                                                                                                                       aaTCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTAtttt                                                                                                                                                                  <  5:727575/148‑1 (MQ=255)

                                                                                                                                                                                                        aTCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCaccgaagcgagggctt                                                                                                                                                                                                                                                     <  7:1044516‑M1/64‑17 (MQ=255)

                                                                                                                                                                                                        aTCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCaccgaagcgagggctt                                                                                                                                                                                                                                                     >  8:1044516‑M1/1‑48 (MQ=255)

                                                                                                                                                                                                        aTCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCaccgaagcgagggct                                                                                                                                                                                                                                                      >  5:1089626‑M1/1‑48 (MQ=255)

                                                                                                                                                                                                         tCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaata                                                                                                                                                                                                    >  6:107314/1‑112 (MQ=255)

                                                                                                                                                                                                         tCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaata                                                                                                                                                                                                    <  5:107314/112‑1 (MQ=255)

                                                                                                                                                                                                                gatgaCAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGtt                                                                                                                                                                                                                                              >  7:1124148/1‑63 (MQ=255)

                                                                                                                                                                                                                gatgaCAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGtt                                                                                                                                                                                                                                              <  8:1124148/63‑1 (MQ=255)

                                                                                                                                                                                                                     cAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGtt                                                                                                                                                                                                                                              <  5:120052/58‑1 (MQ=255)

                                                                                                                                                                                                                      aaGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAAt                                                                                                                                                                                                                <  6:540633/87‑1 (MQ=255)

                                                                                                                                                                                                                      aaGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAAt                                                                                                                                                                                                                >  5:540633/1‑87 (MQ=255)

                                                                                                                                                                                                                      aaGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTgg                                                                                                                                                              <  7:505444/137‑1 (MQ=255)

                                                                                                                                                                                                                      aaGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTgg                                                                                                                                                              >  8:505444/1‑137 (MQ=255)

                                                                                                                                                                                                                       aGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGcgcg                                  >  2:233483/1‑260 (MQ=255)

                                                                                                                                                                                                                          cGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAAGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGAACTGACTTTGattta                                                                                                                                                                      >  7:740336/1‑125 (MQ=255)

                                                                                                                                                                                                                           gCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGTTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTg                                                                                                                                                                           >  5:1039671/1‑119 (MQ=255)

                                                                                                                                                                                                                           gCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTg                                                                                                                                                                           <  6:1039671/119‑1 (MQ=255)

                                                                                                                                                                                                                           gCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATg                              <  4:233482/260‑1 (MQ=255)

                                                                                                                                                                                                                            catcatAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAAcaca                                                                                                                                                                                              <  8:742364/99‑1 (MQ=255)

                                                                                                                                                                                                                             atcatAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaataa                                                                                                                                                                                                   <  6:859731/93‑1 (MQ=255)

                                                                                                                                                                                                                             atcatAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaataa                                                                                                                                                                                                   >  5:859731/1‑93 (MQ=255)

                                                                                                                                                                                                                               catAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACttt                                                                                                                                                                            <  8:908595/114‑1 (MQ=255)

                                                                                                                                                                                                                                    cccTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTg                                                                                                                                                                                 <  6:710808/104‑1 (MQ=255)

                                                                                                                                                                                                                                    cccTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTg                                                                                                                                                                                 >  7:264052/1‑104 (MQ=255)

                                                                                                                                                                                                                                     ccTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGa                                                                                                                                                                          >  7:571011/1‑110 (MQ=255)

                                                                                                                                                                                                                                       ttCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATccc                                                                                                                                                                                                             >  7:451022/1‑73 (MQ=255)

                                                                                                                                                                                                                                       ttCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTgg                                                                                                                                                              >  8:287773/1‑120 (MQ=255)

                                                                                                                                                                                                                                       ttCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAAc                                                                                                                                  >  4:532571/1‑148 (MQ=255)

                                                                                                                                                                                                                                         ctcCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGGATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCa  >  2:461254/1‑274 (MQ=255)

                                                                                                                                                                                                                                           ccTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCgg                                                                                                                              >  7:127120/1‑148 (MQ=255)

                                                                                                                                                                                                                                            cTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAAcaca                                                                                                                                                                                              <  8:694011/83‑1 (MQ=255)

                                                                                                                                                                                                                                              tCAAGCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgattgtactgttactcataagtttcagcgct                                                                                                                                                                                 <  5:733181‑M2/94‑77 (MQ=255)

                                                                                                                                                                                                                                              tCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGc                                                                                                                                                                                          >  5:664595/1‑85 (MQ=255)

                                                                                                                                                                                                                                               cAAGCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactg                                                                                                                                                                                                               <  7:1056565‑M2/63‑47 (MQ=255)

                                                                                                                                                                                                                                               cAAGCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactg                                                                                                                                                                                                               >  8:1056565‑M2/1‑17 (MQ=255)

                                                                                                                                                                                                                                                aaGCCCTCaccgaagcgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgattgtactgttactcataagtttcagcgcttattaacagtcagtctcaggggaggagcaatcctcccttacccttactcactaaattaggtcaaagaatcaacgatgtcaatcagggcgatgcgggtgtatcgcccttaccactcccagacttt                                                     >  2:91601‑M1/1‑8 (MQ=255)

                                                                                                                                                                                                                                                aaGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGatttat                                                                                                                                                                     <  8:661677/104‑1 (MQ=255)

                                                                                                                                                                                                                                                 aGCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgat                                                                                                                                                                                                             <  6:1089626‑M2/63‑49 (MQ=255)

                                                                                                                                                                                                                                                  gCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgattgtactgttactcataagtttcagcgcttattaacagtcagtctcaggggaggagcaa                                                                                                                                                   <  6:510270‑M2/120‑107 (MQ=255)

                                                                                                                                                                                                                                                  gCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgattgtactgttactcataagtttcagcgcttattaacagtcagtctcaggggaggagcaa                                                                                                                                                   >  5:510270‑M2/1‑14 (MQ=255)

                                                                                                                                                                                                                                                   cccTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATcccc                                                                                                                                                                                                            >  8:104917/1‑62 (MQ=255)

                                                                                                                                                                                                                                                   cccTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATcccc                                                                                                                                                                                                            <  7:104917/62‑1 (MQ=255)

                                                                                                                                                                                                                                                   cccTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCt                                                                                                                                                                >  7:936126/1‑106 (MQ=255)

                                                                                                                                                                                                                                                    ccTCaccgaagcgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgattgtactgttactcataagtttcagcgcttattaacagtcagtctcaggggaggagcaatcctcccttacccttactcactaaattaggtcaaagaatcaacgatgtcaatcagggcgatgcgggtgtatcgcccttaccactcccagactttcgac                                                 <  4:91600‑M1/216‑213 (MQ=255)

                                                                                                                                                                                                                                                    ccTCaccgaagcgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgattgtactgttactcataagtttcagcgcttattaacagtcagtctcagggg                                                                                                                                                           <  8:216069‑M1/110‑107 (MQ=255)

                                                                                                                                                                                                                                                    ccTCaccgaagcgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgattgtactgttactcataagtttcagcgcttattaacagtcagtctcagggg                                                                                                                                                           >  7:216069‑M1/1‑4 (MQ=255)

                                                                                                                                                                                                                                                      tCGCTTCGGTTAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACt                                                                                                                                                                              <  8:263409/89‑1 (MQ=255)

                                                                                                                                                                                                                                                      tCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaataaa                                                                                                                                                                                                  >  5:437813/1‑69 (MQ=255)

                                                                                                                                                                                                                                                      tCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACt                                                                                                                                                      <  7:26128/113‑1 (MQ=255)

                                                                                                                                                                                                                                                       caccgaagcgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgattgtactgttactcataagtttcagcgcttattaacagtcagtctcag                                                                                                                                                              >  7:423822‑M1/1‑1 (MQ=255)

CCCGTTGAAGAGTGGGATATCCCTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCA  >  NC_000913/3056724‑3057230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.