New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3056971127 (0.800)13 (0.090) 11/250 NT 9.2% noncoding (123/140 nt) sibC sRNA antisense regulator of toxic IbsC protein
?NC_000913 = 3056979 138 (0.930)noncoding (131/140 nt) sibC sRNA antisense regulator of toxic IbsC protein

Only 100 of 168 total aligned reads displayed.

CCCGTTGAAGAGTGGGATATCCCTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCA  >  NC_000913/3056724‑3057230
                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                           
cccGTTGAAGAGTGGGATATCCCTCTTCCTGCGGGGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTa                                                                                                                                                                                                                                             <  4:132570/272‑1 (MQ=255)
                         ttCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCAATGCTGCCCTGCAATCGTaaa                                                                                                                                                                                                                 >  2:356287/1‑275 (MQ=255)
                                            gTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTgagg                                                                                                                                                                                                                                                         <  4:91600‑M2/216‑5 (MQ=255)
                                            gTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGAGTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAAcaca                                                                                                                                                                                              <  2:64601/275‑1 (MQ=255)
                                             tCGAAAGTCTGGGAGTGGTAAGGACGATACACCCGCATCGCCCTTATTGCCATCGTTGAGTCTTTGACCTAATTTAGGGAGTAAGGGTAAGGGAGGATTGCTCCGCCCCTGATACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAAcaca                                                                                                                                                                                              <  2:40935/274‑1 (MQ=255)
                                              cGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACAAAAc                                                                                                                                                                                            >  1:8367/1‑275 (MQ=255)
                                                aaaGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTgagggctt                                                                                                                                                                                                                                                     >  2:91601‑M2/1‑208 (MQ=255)
                                                      tGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGAt                                                                                                                                                                                    <  4:386058/275‑1 (MQ=255)
                                                                                                    ttGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGCTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAACGTAGAATgcg                                                                                                                                      >  1:130785/1‑275 (MQ=255)
                                                                                                       tttttttGACCTAATTTTGTGGNNGAGGTNAAGGGAGGTTTTCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCaa                                                                                                                                   <  3:8367/271‑1 (MQ=255)
                                                                                                              gACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTga                                                                                                                                                                                                                                                           >  8:402090‑M2/1‑146 (MQ=255)
                                                                                                               aCCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCaa                                                                                                                           <  2:470038/275‑1 (MQ=255)
                                                                                                                          tGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGCGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACGCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGgaga                                                                                                                <  2:377009/275‑1 (MQ=255)
                                                                                                                          tGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACCATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGNCTTTACCGTTACAGCTCCATGCTGCCCTGCCCTCGTAAATCCCCATTAAATAAACAAAACGCATTGACCTGACTNTTATATATTCTCTGGAGGAAAATCACAAAANNAAACACGAAACCCGGCCAAGGTTGGgaga                                                                                                                >  3:56259/1‑275 (MQ=255)
                                                                                                                                            gaTTGCTCCCCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGATTAACAGTACAATCAGGATGATGAAAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACggg                                                                                               <  4:531117/274‑1 (MQ=255)
                                                                                                                                             aTTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCa                                                                                             <  2:285085/275‑1 (MQ=255)
                                                                                                                                               tGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGctgccctgc                                                                                                                                                                                                                          >  5:427154/1‑148 (MQ=255)
                                                                                                                                                      ccccTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTgagg                                                                                                                                                                                                                                                         >  7:216069‑M2/1‑106 (MQ=255)
                                                                                                                                                      ccccTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTgagg                                                                                                                                                                                                                                                         <  8:216069‑M2/110‑5 (MQ=255)
                                                                                                                                                           gagaCTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATcc                                                                                                                                                                                                              >  8:1096732/1‑148 (MQ=255)
                                                                                                                                                           gagaCTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATcc                                                                                                                                                                                                              >  8:309531/1‑148 (MQ=255)
                                                                                                                                                           gagaCTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGc                                                                               >  4:303954/1‑275 (MQ=255)
                                                                                                                                                            agaCTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCAt                                                                                                                                                                                                                       >  6:804207/1‑138 (MQ=255)
                                                                                                                                                            agaCTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCAt                                                                                                                                                                                                                       <  5:804207/138‑1 (MQ=255)
                                                                                                                                                            agaCTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATccc                                                                                                                                                                                                             <  7:309531/148‑1 (MQ=255)
                                                                                                                                                              actgactgTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCa                                                                                                                                                                                                           <  5:117662/148‑1 (MQ=255)
                                                                                                                                                                   ctgTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaa                                                                                                                                                                                                      >  6:727575/1‑148 (MQ=255)
                                                                                                                                                                   ctgTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACaa                                                                                                                                                                                             >  3:6961/1‑157 (MQ=255)
                                                                                                                                                                       taataaGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCa                                                                                                                                                                                         <  1:6961/157‑1 (MQ=255)
                                                                                                                                                                        aataaGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCa                                                                  >  1:68328/1‑275 (MQ=255)
                                                                                                                                                                           aaaagagaaaaCTTATGAGTAACATTACAATCAGGAGGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCa                                                                  <  4:127627/264‑1 (MQ=255)
                                                                                                                                                                                    aaCTTATTCGTAACAATACACTCAGTATGATGACAAGTCGCGTCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGACGGCTTTACCGTTACAGCCNCATGCTNCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCa                                                                                             <  3:27113/236‑1 (MQ=255)
                                                                                                                                                                                    aaCTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCttt                                                                                                                                                                                                                                                    <  5:65879/85‑1 (MQ=255)
                                                                                                                                                                                    aaCTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCttt                                                                                                                                                                                                                                                    >  6:65879/1‑85 (MQ=255)
                                                                                                                                                                                     aCTTATGAGTAACAGTAAAATCAGTATGATGACAAGTCGCCTCACAACCCTTCTCCTTCAAGCCCTCGATTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAAGCCCCATTAAATAAACACACCGCATTGTTCTGACTTTGATTGATTTTCTGGAGCAGACTCGCAAAGTAGCATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAAt                                                      <  1:128988/274‑1 (MQ=255)
                                                                                                                                                                                        tATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGccc                                                                                                                                                                                                                                       >  5:831046/1‑94 (MQ=255)
                                                                                                                                                                                        tATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGccc                                                                                                                                                                                                                                       <  6:831046/94‑1 (MQ=255)
                                                                                                                                                                                        tATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTACCCTGCCATCGTAAATCCCCa                                                                                                                                                                                                           <  5:240515/122‑1 (MQ=255)
                                                                                                                                                                                             gTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCAtgctg                                                                                                                                                                                                                                >  6:226451/1‑96 (MQ=255)
                                                                                                                                                                                                 ccgTACAGACAGTATGATGACAAGTCGCATCAAAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACGGTTACAGCCCCATGCCGCCCCGCCATCGTAAATCCCCATTAAATAAACACAACGCGTTGACCCGACTGTGATTTATTTTACGGTGCAGACTCTCAAAGTAGCAGACGCAACTGGGCGACGGTGTGGAGAAGGGAAAAAAAAAAGGGCCAGCCAGCGACCTACCCGTCGATTTTCCCAGACGGGGAAGTCGCAcagaaaa                                          >  4:145753/3‑270 (MQ=255)
                                                                                                                                                                                                 cAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGAtt                                                                      >  2:127628/1‑246 (MQ=255)
                                                                                                                                                                                                  aGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCAt                                                                                                                                                                                                                       <  8:537026/100‑1 (MQ=255)
                                                                                                                                                                                                  aGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTAAGGGCTTTACCGTTACAGCCCCATGctgccctgccct                                                                                                                                                                                                                       >  7:537026/1‑98 (MQ=255)
                                                                                                                                                                                                     aCAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaa                                                                                                                                                                                                       >  8:605999/1‑113 (MQ=255)
                                                                                                                                                                                                     aCAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaa                                                                                                                                                                                                       <  7:605999/113‑1 (MQ=255)
                                                                                                                                                                                                       aaTCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCa                                                                                                                                                                                                           <  8:66320/107‑1 (MQ=255)
                                                                                                                                                                                                       aaTCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCa                                                                                                                                                                                                           >  7:66320/1‑107 (MQ=255)
                                                                                                                                                                                                       aaTCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTAtttt                                                                                                                                                                  <  5:727575/148‑1 (MQ=255)
                                                                                                                                                                                                         tCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaata                                                                                                                                                                                                    <  5:107314/112‑1 (MQ=255)
                                                                                                                                                                                                           aGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaataaa                                                                                                                                                                                                  >  3:138551/1‑112 (MQ=255)
                                                                                                                                                                                                            gTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAGGGGATAAAAAAACGGGCAAGTCAGTGACATGCCCGTTGATTTTCAGAGAAGGGGAATTTATACCGCCGCCGGGCCCGAATg                              >  4:233257/1‑275 (MQ=255)
                                                                                                                                                                                                            gTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAAAAGGGGAATTAGTACAGCAGACGGGCGCGact                               >  2:439259/1‑272 (MQ=255)
                                                                                                                                                                                                               ttaatccAAGTCGCATCCTAACCCTTCTCCTTCAAGCCCGCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTa                           <  4:311661/269‑1 (MQ=255)
                                                                                                                                                                                                               tgatgaCAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAAcaca                                                                                                                                                                                              <  1:138551/112‑1 (MQ=255)
                                                                                                                                                                                                                gatgaCAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGtt                                                                                                                                                                                                                                              >  7:1124148/1‑63 (MQ=255)
                                                                                                                                                                                                                     cAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGtt                                                                                                                                                                                                                                              >  6:120052/1‑58 (MQ=255)
                                                                                                                                                                                                                     cAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGtt                                                                                                                                                                                                                                              <  5:120052/58‑1 (MQ=255)
                                                                                                                                                                                                                      aaGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAAt                                                                                                                                                                                                                <  6:540633/87‑1 (MQ=255)
                                                                                                                                                                                                                       aGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCCAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCagaa                                                               >  4:264462/1‑230 (MQ=255)
                                                                                                                                                                                                                       aGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGcgcg                                  >  2:233483/1‑260 (MQ=255)
                                                                                                                                                                                                                          cGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAAGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGAACTGACTTTGattta                                                                                                                                                                      >  7:740336/1‑125 (MQ=255)
                                                                                                                                                                                                                          cGCATCATAACCCTTCTACTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGattta                                                                                                                                                                      <  8:740336/125‑1 (MQ=255)
                                                                                                                                                                                                                           gCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGTTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTg                                                                                                                                                                           >  5:1039671/1‑119 (MQ=255)
                                                                                                                                                                                                                             atcatAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaataa                                                                                                                                                                                                   >  5:859731/1‑93 (MQ=255)
                                                                                                                                                                                                                             atcatAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaataa                                                                                                                                                                                                   <  6:859731/93‑1 (MQ=255)
                                                                                                                                                                                                                               catAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACttt                                                                                                                                                                            >  7:908595/1‑114 (MQ=255)
                                                                                                                                                                                                                               catAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACttt                                                                                                                                                                            <  8:908595/114‑1 (MQ=255)
                                                                                                                                                                                                                                    cccTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTg                                                                                                                                                                                 <  8:264052/104‑1 (MQ=255)
                                                                                                                                                                                                                                    cccTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTg                                                                                                                                                                                 >  7:264052/1‑104 (MQ=255)
                                                                                                                                                                                                                                     ccTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGa                                                                                                                                                                          >  7:571011/1‑110 (MQ=255)
                                                                                                                                                                                                                                     ccTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGa                                                                                                                                                                          <  8:571011/110‑1 (MQ=255)
                                                                                                                                                                                                                                      cTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTg                                                                                                                                                                           >  6:1069618/1‑108 (MQ=255)
                                                                                                                                                                                                                                       ttCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATccc                                                                                                                                                                                                             <  8:451022/73‑1 (MQ=255)
                                                                                                                                                                                                                                       ttCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATccc                                                                                                                                                                                                             >  7:451022/1‑73 (MQ=255)
                                                                                                                                                                                                                                       ttCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAAc                                                                                                                                  >  4:532571/1‑148 (MQ=255)
                                                                                                                                                                                                                                         ctcCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGGATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCa  >  2:461254/1‑274 (MQ=255)
                                                                                                                                                                                                                                           ccTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCgg                                                                                                                              <  2:532572/148‑1 (MQ=255)
                                                                                                                                                                                                                                           ccTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCgg                                                                                                                              >  7:127120/1‑148 (MQ=255)
                                                                                                                                                                                                                                              tCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGc                                                                                                                                                                                          <  6:664595/85‑1 (MQ=255)
                                                                                                                                                                                                                                              tCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGc                                                                                                                                                                                          >  5:664595/1‑85 (MQ=255)
                                                                                                                                                                                                                                              tCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTg                                                                                                                                                                           <  5:524392/100‑1 (MQ=255)
                                                                                                                                                                                                                                               cAAGCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactg                                                                                                                                                                                                               >  8:1056565‑M2/1‑17 (MQ=255)
                                                                                                                                                                                                                                               cAAGCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactg                                                                                                                                                                                                               <  7:1056565‑M2/63‑47 (MQ=255)
                                                                                                                                                                                                                                                aaGCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgat                                                                                                                                                                                                             >  8:1044516‑M2/1‑16 (MQ=255)
                                                                                                                                                                                                                                                aaGCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgat                                                                                                                                                                                                             <  7:1044516‑M2/64‑49 (MQ=255)
                                                                                                                                                                                                                                                aaGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGatttat                                                                                                                                                                     >  7:661677/1‑104 (MQ=255)
                                                                                                                                                                                                                                                aaGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGatttat                                                                                                                                                                     <  8:661677/104‑1 (MQ=255)
                                                                                                                                                                                                                                                 aGCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgat                                                                                                                                                                                                             <  6:1089626‑M2/63‑49 (MQ=255)
                                                                                                                                                                                                                                                  gCCCTCGCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgattgtactgttactcataagtttcagcgcttattaacagtcagtctcaggggaggagcaa                                                                                                                                                   <  6:510270‑M2/120‑107 (MQ=255)
                                                                                                                                                                                                                                                   cccTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCt                                                                                                                                                                >  7:936126/1‑106 (MQ=255)
                                                                                                                                                                                                                                                      tCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaataaa                                                                                                                                                                                                  <  6:437813/69‑1 (MQ=255)
                                                                                                                                                                                                                                                      tCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATtaaataaa                                                                                                                                                                                                  >  5:437813/1‑69 (MQ=255)
                                                                                                                                                                                                                                                      tCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCTTTGATCGGACt                                                                                                                                                                              >  7:263409/1‑89 (MQ=255)
                                                                                                                                                                                                                                                      tCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACt                                                                                                                                                      >  8:26128/1‑113 (MQ=255)
                                                                                                                                                                                                                                                        gCTTCGGTgagggcttgaaggagaagggttatgatgcgacttgtcatcatactgattgtactgttactcataagtttcagcgcttattaacagtcagtctcaggggaggagcaatcctcccttacccttactcactaaattaggtcaa                                                                                                                 >  7:1004030‑M2/1‑8 (MQ=255)
                                                                                                                                                                                                                                                         cTTCGGTGAGGGCTTTACCGTTACAGCCCCATGctgcc                                                                                                                                                                                                                              >  6:418963/1‑38 (MQ=255)
                                                                                                                                                                                                                                                         cTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGgaga                                                                                                                <  8:127120/148‑1 (MQ=255)
                                                                                                                                                                                                                                                           tCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGa                                                                                                                                           >  6:10565/1‑119 (MQ=255)
                                                                                                                                                                                                                                                           tCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGa                                                                                                                                           <  5:10565/119‑1 (MQ=255)
                                                                                                                                                                                                                                                               tGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAgg                                                                                                             <  6:1018154/145‑1 (MQ=255)
                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                           
CCCGTTGAAGAGTGGGATATCCCTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGTGAGGGCTTTACCGTTACAGCCCCATGCTGCCCTGCCATCGTAAATCCCCATTAAATAAACACAACGCATTGATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGATAAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCA  >  NC_000913/3056724‑3057230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.