New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4094379 =	50 (0.320)	4 (0.030)	4/254	NT	8.1%	noncoding (64/402 nt)	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences
	?	NC_000913	4094514 =	43 (0.290)					noncoding (199/402 nt)	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences

AGCGCGGTTGTTGGTGGAAATTGTCGTGATATGGTGCGATATCGGCGTCATCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGA  >  NC_000913/4094110‑4094643                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                         caggtagcgaatggctggagagcgtgcgggcttatgagaaagaaattttgagtcgccgcgggtaaacactgccggatgcggcgcgagcgccttatccggcctacgggtcggcaacagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgccttatccggcctaacggtcggcaatagttgtaggcctgataaaacgcgacagcgtagccaccggcattgattgccgggagcggaccaagtgcc                                                                                                                                                                                                                                                                          <  4:475689‑M1/1‑1 (MQ=255)  ggggggTTGTTGGTGGAAATTGTGGTGATATGGGGCGATATCGGCGTCATCCAGGCGTGGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATc                                                                                                                                                                                                                                                                     <  2:282937/270‑1 (MQ=255)  gcgcGGTTGTTGGTGGAAATTGTCGTGATATGGGGCGATATCGGCGTAATCCAGGCGTAGCGTCAGGTGGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATc                                                                                                                                                                                                                                                                     <  2:159991/274‑1 (MQ=255)   cgcgGTTGTTGGTGGAAATTGTCGTGATATGGTGCGATATCGGCGTCATCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCa                                                                                                                                                                                                                                                                    >  2:318863/1‑274 (MQ=255)      ggTTGTTGGTGGAAATTGTCGTGATATGGTGCGATATCGGCGTCATCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGc                                                                                                                                                                                                                                                                 >  2:17186/1‑274 (MQ=255)      agcgaatggctggagagcgtgcgggcttatgagaaagaaattttgagtcgccgcgggtaaacactgccggatgcggcgcgagcgccttatccggcctacgggtcggcaacagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgccttatccggcctacaggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgcCTTATc                                                                                                                                                                                                                                                                     <  2:259234‑M1/6‑1 (MQ=255)      agcgaatggctggagagcgtgcgggcttatgagaaagaaattttgagtcgccgcgggtaaacactgccggatgcggcgcgagcgccttatccggcctacgggtcggcaacagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgccttatccggcctacaggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgcCTTATc                                                                                                                                                                                                                                                                     <  2:41895‑M1/6‑1 (MQ=255)        ttgttgGTGGAAATTGTCGTGATATGGTGCGATATCGGCGTCATCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCt                                                                                                                                                                                                                                                               <  2:265708/274‑1 (MQ=255)        ttgttgGTGGAAATTGTCGTGATATGGTGCGATATCGGCGTCATCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGACGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCAACGCTGGCGCG‑‑‑‑‑TCTTATCCGGCCt                                                                                                                                                                                                                                                               >  2:268524/1‑274 (MQ=255)                 gAAATTGTCGTGATATGGTGCGATATCGGCGTCATCCAGGCGTAGCGTCCGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTTTGTTCCTGTAAATTCGTTGTTGTCGGTTTCACGACCCGTAGGCCGGAGAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATCCGGCCCTGTCGCC‑‑‑‑‑TCGTCGCCGGCCTACAAcctttt                                                                                                                                                                                                                                                     >  4:15639/1‑270 (MQ=255)                  aaaTTGTCGTGATATGGTGCGATATCGGCGTCATCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGCTAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATTCGACGCTGTCGCC‑‑‑‑‑TCTTATCAGGCCTACAACTATTg                                                                                                                                                                                                                                                     >  2:54296/1‑274 (MQ=255)                     ttGTCGTGATATGTGGCGATTACGGCGTCATCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCg                                                                                                                                                                                                                                                  <  2:61600/274‑1 (MQ=255)                     ttGTCGTGATATGGTGCGATATCGGCGTGATCCAGGCGTAGCGTCAGGGTGCCGCCATTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCGTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCGTGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCg                                                                                                                                                                                                                                                  <  2:235371/274‑1 (MQ=255)                                        tatCGGCGTCATCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACCAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGCCGGATTCACGACCCGGAGGCCGGATAAGGCACTCGCGCCGCATCCGGCCATCAATGCCTGATGTGCTGCTGTACCC‑‑‑‑‑ACTCTTCAGGCCTCCAACTATTCCCGACCGTTAGGCCTgtgaagt                                                                                                                                                                                                                               >  4:404377/1‑268 (MQ=255)                                           cGGCGTCATCCAGGCGTAGCGATAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTGCAGCCAGGCGTCGGTGGTGGCTTTGATCATACCCTGGACAAACCAGGACTGAGTAATGTTTTGAATGTTCTGTGTTCCTGTAAATCCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAACGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATGGCCGACCTGTAGGCCTGATAAGGCAc                                                                                                                                                                                                                            <  2:110535/274‑1 (MQ=255)                                                  aTCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTCTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACt                                                                                                                                                                                                                                                         >  2:118754/1‑238 (MQ=255)                                                          tgagggtgaGGTTGCCGCCGTTGCGCTCATCCCCGCCTTTCAGACAGGCGTCGGTGGTGGCTTTGATCATGCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCgg                                                                                                                                                                                                             <  4:375001/266‑1 (MQ=255)                                                                       gccgccGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGcc                                                                                                                                                                                                  <  2:15639/272‑1 (MQ=255)                                                                              ttGCGCTCATCCCAGCCTTTCAGCCATGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTTAGTAATGTTTTGCATGTTCTGGGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATGGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGAc                                                                                                                                                                                         <  2:300562/274‑1 (MQ=255)                                                                                       tCCCAGCAGTTCATGCAGGCTTCGGTGGTGGCTTTGATCATTCCCTGTACAAACCAGTACTGAGTAATGTTTTGCATGTGCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGCGAAGGCGCTCGCGCCGAATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGt                                                                                                                                                                               <  2:351351/275‑1 (MQ=21)                                                                                                ttCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCt                                                                                                                                                                                                                                                                         >  4:550284/1‑176 (MQ=255)                                                                                                    gCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATc                                                                                                                                                                                                                                                                     <  2:550285/176‑1 (MQ=255)                                                                                                        ggCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCC‑GATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCa                                                                                                                                                                                                                                                                    >  4:25859/1‑172 (MQ=255)                                                                                                            tCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCC‑GATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGcc                                                                                                                                                                                                                                                                <  2:25860/172‑1 (MQ=255)                                                                                                               ggtgtggATTTGGTCCTGCCCGGGTCCAACGAGGATTGGGTATTGTTTGGCAGGTTCTTTGGTCCTGTAAAGTGGGGTTGGTCGGATGCACGACCCGTCGGCGGGAAAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACGATTGCCGACCTGTCGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGcc                                                                                                                                                       <  4:524732/272‑1 (MQ=14)                                                                                                               ggggtggCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAAGGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGcc                                                                                                                                                       <  2:57171/273‑1 (MQ=255)                                                                                                                tggtggCTTTGATCATCCCTTGGACAAACCGGGATTGGGTAATGTTTGGCATGTTCTGTGTTCCTGTAAATTGGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCg                                                                                                                                                      <  4:318862/275‑1 (MQ=255)                                                                                                                   tggCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCGCGCGCCGCATCCGGCAATCACTGCCCGATGCGACGCTGTTGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATACGGCCCTTGTGCCACCTCCGGCAATTAATGCCTGAAGCGCCGCTGTCCCGTCTTCTCAGGCCTCCAAACGTTGCCGccc                                                                                                                                                   >  4:397193/1‑275 (MQ=21)                                                                                                                          gATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTAGAACTGTTGCCCATCTGTAGGc                                                                                                                                            >  2:138321/1‑275 (MQ=255)                                                                                                                          gATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAAGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCCGTCGCGTCTTATCAGGCCCACCACCGTTGCCCACCTGt                                                                                                                                                >  2:146783/1‑271 (MQ=255)                                                                                                                                   cTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTAt                                                                                                                                                                                                                                                                      >  8:177956/1‑144 (MQ=255)                                                                                                                                   cTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTAt                                                                                                                                                                                                                                                                      <  7:177956/144‑1 (MQ=255)                                                                                                                                           aCCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCCCGTCTTATCAGGCCTCCCACTGTTGCCGACCTTTAAGCCGGagacgccccttct                                                                                                                            >  4:451100/1‑262 (MQ=255)                                                                                                                                                     aatAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGt                                                                                                                                                           >  1:6286/3‑233 (MQ=255)                                                                                                                                                     aGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATCAGGCACTTGTGCCGc                                                                                                                       >  2:475690/1‑274 (MQ=255)                                                                                                                                                          tGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGGGTTGTCGGATGCACGACCCATAGGCCGGATAAGGCGCTAGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatc                                                                                                            <  2:259866/275‑1 (MQ=255)                                                                                                                                                                gCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTg                                                                                                                                                                                                                                     <  5:894988/148‑1 (MQ=255)                                                                                                                                                                      tCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGAt                                                                                                                                                                                                                                   >  1:26559/1‑144 (MQ=255)                                                                                                                                                                          tgtTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAgg                                                                                                                                                                                                                               <  3:26559/144‑1 (MQ=255)                                                                                                                                                                                 gTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGc                                                                                                                                                                                                                                                    <  8:241034/116‑1 (MQ=255)                                                                                                                                                                                 gTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGc                                                                                                                                                                                                                                                    >  7:241034/1‑116 (MQ=255)                                                                                                                                                                                  tAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCtt                                                                                                                                                                                                                                                                        >  7:1069113/1‑95 (MQ=255)                                                                                                                                                                                  tAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCtt                                                                                                                                                                                                                                                                        <  8:1069113/95‑1 (MQ=255)                                                                                                                                                                                    aaTTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCCCATCCGGCCATCAATGCCTTGTGCGACGCGTTCCCGTc                                                                                  >  4:132967/1‑275 (MQ=255)                                                                                                                                                                                     gccttatccggcctacaggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgcCTTATc                                                                                                                                                                                                                                                                     <  8:793465‑M1/6‑1 (MQ=255)                                                                                                                                                                                     gccttatccggcctacaggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgcCTTATc                                                                                                                                                                                                                                                                     >  7:793465‑M1/95‑100 (MQ=255)                                                                                                                                                                                         ggTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGCTAAGGCACTTGTGCCGCATCCGGACATCAATGCCTGATGCGACGCTGTCGCGTCTtctc                                                                             >  2:380870/1‑275 (MQ=255)                                                                                                                                                                                          gtgtGGTCGGATGCACGACCCGTGGGCGGGATAAGGCGGCTGCGCCGAATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TGTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGAAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATc                                                                             <  2:148309/274‑1 (MQ=255)                                                                                                                                                                                                cctacaggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgcCt                                                                                                                                                                                                                                                                         <  4:571859‑M1/2‑1 (MQ=255)                                                                                                                                                                                                 ctacaggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgcc                                                                                                                                                                                                                                                                          <  6:380004‑M1/1‑1 (MQ=255)                                                                                                                                                                                                 ctacaggtcggcaatagttgtaggcatgataagacgcgaaagcgtcgcctcaggcattgattgccggatgcggcacaagtgcc                                                                                                                                                                                                                                                                          >  5:380004‑M1/83‑83 (MQ=255)                                                                                                                                                                                                    caggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgcCTTATc                                                                                                                                                                                                                                                                     >  2:571860‑M1/80‑85 (MQ=255)                                                                                                                                                                                                     tGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCTACGCTGTCGCGTCTTATCCGGCCTACAACt                                                                 >  2:262210/1‑275 (MQ=255)                                                                                                                                                                                                            cccGTAGGCCGTATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGcc                                                           <  2:351384/274‑1 (MQ=255)                                                                                                                                                                                                            cccGTAGGCCGGATAAGGCGCCCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGcc                                                           <  2:194216/274‑1 (MQ=255)                                                                                                                                                                                                                      ggATAAGGGGCGCGCGCGGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGGG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAgg                                                 <  2:467154/274‑1 (MQ=255)                                                                                                                                                                                                                           tgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgcCTTATCAGGCCTACAACTATTGCCGACCTGTAgg                                                                                                                                                                                                                                         <  8:566856‑M1/34‑1 (MQ=255)                                                                                                                                                                                                                           tgataagacgcgacagcgtcgcatcaggcattgattgccggatgcggcacaagtgcCTTATCAGGCCTACAACTATTGCCGACCTGTAgg                                                                                                                                                                                                                                         >  7:566856‑M1/57‑90 (MQ=255)                                                                                                                                                                                                                           aGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGca                                                                                                                                                                                                           >  6:641277/1‑115 (MQ=255)                                                                                                                                                                                                                           aGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGca                                                                                                                                                                                                           <  5:641277/115‑1 (MQ=255)                                                                                                                                                                                                                                  cgcgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGt                                                                                                                                                                                    >  2:218567/1‑131 (MQ=34)                                                                                                                                                                                                                                                  tcaggcattgattgccggatgcggcacaagtgcCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATaa                                                                                                                                                                                                                                 >  6:640794‑M1/34‑75 (MQ=255)                                                                                                                                                                                                                                                  tcaggcattgattgccggatgcggcacaagtgcCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATaa                                                                                                                                                                                                                                 <  5:640794‑M1/42‑1 (MQ=255)                                                                                                                                                                                                                                                   tcaatGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACCCTGTCGCGTCTTCTCAGGCCCACAACTATTGCCCACCTGTTGGCCCGGTAAGGGACTTGTGCCGCATCCgggc                   >  4:259233/1‑273 (MQ=255)                                                                                                                                                                                                                                                             aTGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACg                                                                                            >  4:181026/1‑192 (MQ=34)                                                                                                                                                                                                                                                             aTGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCACCCGGCAATCCATGCCTGATTCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTTTAGGCCGGGTAAGGCACCTGTGCCCGATCCGGCACTCACTGcc          >  2:485931/1‑274 (MQ=14)                                                                                                                                                                                                                                                                 gACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGt                                                                                        <  2:181027/192‑1 (MQ=34)                                                                                                                                                                                                                                                                    ggtctCGCG‑‑‑‑‑TATTATCAGGCCTCCACCGATTGCCGCTTGGTCGGCCTGATATGGCGGTTGTGCCGGATCCGGCAATCAATGCGTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGa  <  4:17186/271‑1 (MQ=14)                                                                                                                                                                                                                                                                         cgcg‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGcc                                                                                                                                                                                                  <  6:989174/78‑1 (MQ=34)                                                                                                                                                                                                                                                                         cgcg‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGcc                                                                                                                                                                                                  >  5:989174/1‑78 (MQ=34)                                                                                                                                                                                                                                                                                  tCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGa                                                                                                                                                     >  7:214534/1‑119 (MQ=32)                                                                                                                                                                                                                                                                                  tCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGa                                                                                                                                                     <  8:214534/119‑1 (MQ=33)                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                         AGCGCGGTTGTTGGTGGAAATTGTCGTGATATGGTGCGATATCGGCGTCATCCAGGCGTAGCGTCAGGTTGCCGCCGTTGCGCTCATCCCAGCCTTTCAGCCAGGCGTCGGTGGTGGCTTTGATCATTCCCTGGACAAACCAGGACTGAGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGA  >  NC_000913/4094110‑4094643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.