New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4094379 =	50 (0.320)	4 (0.030)	4/254	NT	8.1%	noncoding (64/402 nt)	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences
	?	NC_000913	4094514 =	43 (0.290)					noncoding (199/402 nt)	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences	REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences

AGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCG‑CCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGC  >  NC_000913/4094258‑4094788                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                    aGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATCAGGCACTTGTGCCGc                                                                                                                                                                                                                                                                         >  2:475690/1‑274 (MQ=255)      tGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGGGTTGTCGGATGCACGACCCATAGGCCGGATAAGGCGCTAGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatc                                                                                                                                                                                                                                                              <  2:259866/275‑1 (MQ=255)                                aaTTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCCCATCCGGCCATCAATGCCTTGTGCGACGCGTTCCCGTc                                                                                                                                                                                                                                    >  4:132967/1‑275 (MQ=255)                                     ggTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGCTAAGGCACTTGTGCCGCATCCGGACATCAATGCCTGATGCGACGCTGTCGCGTCTtctc                                                                                                                                                                                                                               >  2:380870/1‑275 (MQ=255)                                      gtgtGGTCGGATGCACGACCCGTGGGCGGGATAAGGCGGCTGCGCCGAATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TGTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGAAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATc                                                                                                                                                                                                                               <  2:148309/274‑1 (MQ=255)                                                 tGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCTACGCTGTCGCGTCTTATCCGGCCTACAACt                                                                                                                                                                                                                   >  2:262210/1‑275 (MQ=255)                                                        cccGTAGGCCGTATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGcc                                                                                                                                                                                                             <  2:351384/274‑1 (MQ=255)                                                        cccGTAGGCCGGATAAGGCGCCCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGcc                                                                                                                                                                                                             <  2:194216/274‑1 (MQ=255)                                                                  ggATAAGGGGCGCGCGCGGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGGG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAgg                                                                                                                                                                                                   <  2:467154/274‑1 (MQ=255)                                                                                               tcaatGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACCCTGTCGCGTCTTCTCAGGCCCACAACTATTGCCCACCTGTTGGCCCGGTAAGGGACTTGTGCCGCATCCgggc                                                                                                                                                                     >  4:259233/1‑273 (MQ=255)                                                                                                         aTGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACg                                                                                                                                                                                                                                              >  4:181026/1‑192 (MQ=34)                                                                                                         aTGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCACCCGGCAATCCATGCCTGATTCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTTTAGGCCGGGTAAGGCACCTGTGCCCGATCCGGCACTCACTGcc                                                                                                                                                            >  2:485931/1‑274 (MQ=14)                                                                                                             gACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGt                                                                                                                                                                                                                                          <  2:181027/192‑1 (MQ=34)                                                                                                                ggtctCGCG‑‑‑‑‑TATTATCAGGCCTCCACCGATTGCCGCTTGGTCGGCCTGATATGGCGGTTGTGCCGGATCCGGCAATCAATGCGTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGa                                                                                                                                                    <  4:17186/271‑1 (MQ=14)                                                                                                                                  ATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGCTTCGACGCtgtcgcttc                                                                                                                                        <  2:117414‑M1/274‑4 (MQ=255)                                                                                                                                      ggCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGAAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATc                                                                                                                                   <  2:470827/275‑1 (MQ=255)                                                                                                                                                  ttGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGCTGCGACGCTGTCGCGTCTTATCATGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTTTGCCCCATCCCGCAATCAATGCCCTATCTGACGCTTTCCCGTCTTATCCGGCCcacaccc                                                                                                                       >  4:374769/1‑272 (MQ=14)                                                                                                                                                                      tAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCg                                                                                                                                                                                                                                                                    >  7:650605/1‑114 (MQ=32)                                                                                                                                                                      tAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCg                                                                                                                                                                                                                                                                    <  8:650605/114‑1 (MQ=32)                                                                                                                                                                           cACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATaa                                                                                               >  2:303202/1‑274 (MQ=39)                                                                                                                                                                                gtgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCAATTGTGCCGCATCCGGCAATCAATGCCTGATGCCACGCTGTCCCGTCTTATCAGGCCTACAAATGTTTCCGACCCCTCGTCCGGAAAAAgccc                                                                                          >  4:171286/1‑272 (MQ=11)                                                                                                                                                                                      cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGcg‑cc                                                                                  <  2:171287/275‑1 (MQ=39)                                                                                                                                                                                      cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTCNCGCGTCTTATCAGGCCTACAACTNTTGCNCACCCGTCGGCCTGCTAAAGCCATTTTGCCCCATCCGGcaatcaactcctcacn                                                                                                                                                       >  4:539267/1‑198 (MQ=11)                                                                                                                                                                                            gCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatcaa                                                                                                                                                                                                                                                            >  5:236574/1‑100 (MQ=34)                                                                                                                                                                                            gCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatcaa                                                                                                                                                                                                                                                            <  6:236574/100‑1 (MQ=33)                                                                                                                                                                                               atcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGCCCTGTAGGCCGGATGCGGCACAAGTGcctta                                                                                                                                                                                                                                                                        <  5:675337/85‑4 (MQ=11)                                                                                                                                                                                               atcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATGCGGCACAAGTGcctga                                                                                                                                                                                                                                                                        >  6:675337/1‑82 (MQ=11)                                                                                                                                                                                                 caagGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCG‑CCGCATCCGGCa                                                                        <  2:374770/274‑1 (MQ=39)                                                                                                                                                                                                          aTGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCC‑CCGCATCCCGCCGTGTTTAccc                                                              >  2:358896/1‑275 (MQ=255)                                                                                                                                                                                                           tGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCCCTCGCG‑CCGCATCCGGCCGGGttttaccg                                                             >  2:246023/1‑270 (MQ=255)                                                                                                                                                                                                               aCGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCTTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGCCAATCAATGCCTGATGCGACGCTGTCGCGTCTTTTCAGGCCTACAACTGTTGCCGACCCATAGGCCTGATAAAGC‑CTCCCGCCCGCCTCCGGCAgggtgtcacccgg                                                           >  4:357472/1‑264 (MQ=11)                                                                                                                                                                                                                        cgTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCg                                                                                                                                                                                                                                                 >  8:238323/1‑83 (MQ=33)                                                                                                                                                                                                                        cgTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCg                                                                                                                                                                                                                                                 <  7:238323/83‑1 (MQ=35)                                                                                                                                                                                                                            ttatcaggcctacaggtcggcaatagttgtaggcctgataagGCACTTGTGCCGCATCCGGCAATCAATGCCTGa                                                                                                                                                                                                                                                     >  6:640794‑M2/43‑75 (MQ=255)                                                                                                                                                                                                                            ttatcaggcctacaggtcggcaatagttgtaggcctgataagGCACTTGTGCCGCATCCGGCAATCAATGCCTGa                                                                                                                                                                                                                                                     <  5:640794‑M2/33‑1 (MQ=255)                                                                                                                                                                                                                               tCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACTCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCCATCAATGCCTGATGCTACGCTGTCGCGCCTTATCCGGCCTACAACTGCTGCCGACCCGTACGCCGGTTAAGGCGATCGCG‑CCGCATACGGCAGTGTTTACCCGCGGCGACGCaaaactccct                                          >  1:94876/1‑268 (MQ=14)                                                                                                                                                                                                                                  ggCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATaa                                                                                                                                                                                           <  7:150189/127‑1 (MQ=39)                                                                                                                                                                                                                                  ggCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATaa                                                                                                                                                                                           >  8:150189/1‑127 (MQ=38)                                                                                                                                                                                                                                    cctacaggtcggcaatagttgtaggcctgataagGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCa                                                                                                                                                                                                                              >  7:566856‑M2/35‑90 (MQ=255)                                                                                                                                                                                                                                    cctacaggtcggcaatagttgtaggcctgataagGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCa                                                                                                                                                                                                                              <  8:566856‑M2/56‑1 (MQ=255)                                                                                                                                                                                                                                    ccTACAACTGTAGCCGACCTGTAGGCCGGATAAGGAACTTGTGCCCCATCCGGAAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTTCCGAATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCG‑CCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCa                                     <  2:39646/274‑1 (MQ=255)                                                                                                                                                                                                                                             gTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGCCGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCCCGCG‑CCGCATCCGGCAGTGTTTCACCGCGGCGCCTCAAAATTTCTTTCTCATAAGCCCGCa                           >  1:10772/1‑275 (MQ=255)                                                                                                                                                                                                                                             gTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGATCGCG‑CCGCATCCGGCAGTGTTTACCCGCGGGGCCTCAAACATTCTTTCTCATAAGCCCCCa                           >  2:1468/1‑275 (MQ=255)                                                                                                                                                                                                                                             gTTGCCGACCTGTAGGCCGAATAAGGAAGTTGGGCCGCATCCGTCAAGCACTGCCTGACTCCACGCTGTCGCGTCTTATCAGGCCTACAACTCTTGCCGACCTGTAGGCCGGATAAGGCACTTGTACGGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCG‑CCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCa                           <  2:404378/275‑1 (MQ=17)                                                                                                                                                                                                                                              ttGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCG‑CCGCATCCGGCAGTGTTTACCCGCGGCGCCTCAAAATTTCTTTCTTATTATCCCGcc                           >  1:1330/1‑273 (MQ=255)                                                                                                                                                                                                                                                  cGACCTGTAGGCCGGATAGGGCACGTGTGCCCCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTTTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGAGGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCG‑CCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACg                         <  1:3516/272‑1 (MQ=255)                                                                                                                                                                                                                                                  cGACCGGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCG‑CCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACg                         <  2:197589/272‑1 (MQ=255)                                                                                                                                                                                                                                                      cTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAgg                                                                                                                                                                                                   <  1:74454/99‑1 (MQ=37)                                                                                                                                                                                                                                                                gataagGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTg                                                                                                                                                                                                       >  2:571860‑M2/7‑85 (MQ=255)                                                                                                                                                                                                                                                                gataagGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGc                                                                                                                                                                                        >  7:793465‑M2/7‑100 (MQ=255)                                                                                                                                                                                                                                                                gataagGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGc                                                                                                                                                                                        <  8:793465‑M2/94‑1 (MQ=255)                                                                                                                                                                                                                                                                gataagGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCG‑CCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCt        <  2:41895‑M2/269‑1 (MQ=255)                                                                                                                                                                                                                                                                gataagGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCG‑CCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCt        <  2:259234‑M2/269‑1 (MQ=255)                                                                                                                                                                                                                                                                    agGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAgg                                                                                                                                                                                                   <  4:571859‑M2/83‑1 (MQ=255)                                                                                                                                                                                                                                                                     gGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAg                                                                                                                                                                                                    <  6:380004‑M2/82‑1 (MQ=255)                                                                                                                                                                                                                                                                     gGCACTTGTGCCGCATCCGGCAATCAATGCCTGAGGCGACGCTTTCGCGTCTTATCATGCCTACAACTATTGCCGACCTGTAg                                                                                                                                                                                                    >  5:380004‑M2/2‑83 (MQ=255)                                                                                                                                                                                                                                                                     gGCACTTGGTCCGCTCCCGGCAATCAATGCCGGTGGCTACGCTGTCGCGTTTTATCAGGCCTACAACTATTGCCGACCGTTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCG‑CCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTg   <  4:475689‑M2/274‑1 (MQ=255)                                                                                                                                                                                                                                                                      gCACTTGTGCCGCATCCGGCAATCAATGCCTGCTGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCCCTTGCACCGCCTCCGGCAATCAATGCCTTACGCGCCGCTTGCGCGTCTTATCCAGCCTACAACTCTTTCCGACCCGTTGGCCAGATCCGGCCCTCTCG‑CCCCACCCGGCAGGCTTTACCCGCCGCGACTCAACATTCCTCTTCCATAAGCCCGCACGCTCTACAACCCTTCCCCAccctc  >  4:522278/1‑272 (MQ=9)                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                    AGTAATGTTTTGCATGTTCTGTGTTCCTGTAAATTCGGTGTTGTCGGATGCACGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCG‑‑‑‑‑TCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCG‑CCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGC  >  NC_000913/4094258‑4094788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.