New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4534139134 (0.850)4 (0.030) 4/246 NT 2.9% intergenic (‑86/+291) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment
?NC_000913 = 4534160 142 (0.970)intergenic (‑107/+270) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment
Rejected: Frequency below/above cutoff threshold.

Only 100 of 197 total aligned reads displayed.

CGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGTAGCATTCAACGGAAGTGACGCGGCCTGAAGAATCGCGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATC  >  NC_000913/4533867‑4534413
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                  
                                        ggCTAGCGTGCAGTCGGTCAGCAAAAGACTGTCGCGGCTGTAGCAGTCAACGGAAGTGAAGCGGCCTGAAGAATCGCGGACGTGCGCAATACGTCTACCGTTATCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTCTTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACa                                                                                                                                                                                                                                          <  1:49110/275‑1 (MQ=255)
                                                                   cccTTCGCGGCTGTAGCATTCAACGGAAGTGACGCGGCCTGAAGAATCGCGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACCCACCGCGGTGTCCGCATTCGCTTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGCACTGATTATCGGATGGTTACATTCTCCAGCATCCAAGCCTCCGgttg                                                                                                                                                                                                                >  2:534247/1‑274 (MQ=255)
                                                                    ccTTCGCGGCTGTAGAATTTAACGGAAGTGACGCGGCCTGAAGAAATGCGGACGTGCGCAATACGTTTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgtt                                                                                                                                                                                                                 <  4:458458/272‑1 (MQ=255)
                                                                                tAGCATTCAACGGAAGTGACGCGGCCTGAAGAATCGCGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCCCCTTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCACCATTCAAGCCTCGGGTTTGGTTGAAAgggttt                                                                                                                                                                                                  >  4:179859/1‑271 (MQ=255)
                                                                                                                    cgGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTg                                                                                                                                                                                                                                                                            >  2:562915/1‑165 (MQ=255)
                                                                                                                        cGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGaaaa                                                                                                                                                                                                                                                                        <  4:562914/165‑1 (MQ=255)
                                                                                                                                 tACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTTGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAg                                                                                                                                                 <  2:106595/275‑1 (MQ=255)
                                                                                                                                     tCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGaaa                                                                                                                                              <  2:179860/274‑1 (MQ=255)
                                                                                                                                           tttAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAgg                                                                                                                                                                                                                                                                      >  7:592462/1‑148 (MQ=255)
                                                                                                                                            ttAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATACTCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCTGATGATTACATTCTCCAGCATCAAAGCCCCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAAACCGTAGTTAGAGGAGGTATATGTTTCAGTAGAAAAAGTGTGa                                                                                                                                      >  4:477635/1‑275 (MQ=255)
                                                                                                                                              aGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGCTGATTACATTCTCCAGCATCAAAGCCTCGGGTTGGGTTGAAAGGTATTTCCGGAGCGAATATTAACACGTAGTTATAGGAGGGCTTTGTTTCCGTAGAAAAAGGGTGaat                                                                                                                                    >  4:333611/1‑273 (MQ=255)
                                                                                                                                              aGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAACGTGTGATg                                                                                                                                    >  2:246956/1‑275 (MQ=255)
                                                                                                                                               gCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCgg                                                                                                                                                                                                                                                                  <  8:121097/148‑1 (MQ=255)
                                                                                                                                                       gtgtAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATagg                                                                                                                                                                   <  2:130412/235‑1 (MQ=255)
                                                                                                                                                           aaGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTtccccgaccttttcaggccggactgattat                                                                                                                                                                                                                                                      <  6:879708‑M1/148‑31 (MQ=255)
                                                                                                                                                           aaGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCgg                                                                                                                                                                                                                                                                                >  5:493896/1‑122 (MQ=255)
                                                                                                                                                           aaGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCgg                                                                                                                                                                                                                                                                                <  6:493896/122‑1 (MQ=255)
                                                                                                                                                            aGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatc                                                                                                                                                                                                                                                     >  5:450939‑M2/1‑138 (MQ=255)
                                                                                                                                                             ggTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCgg                                                                                                                                                                                                                                                                  <  5:439073/134‑1 (MQ=255)
                                                                                                                                                              gTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTtccccgaccttttcaggccggactgattatcaa                                                                                                                                                                                                                                                   <  5:1084941‑M1/148‑34 (MQ=255)
                                                                                                                                                                  gttgttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGcc                                                                                                                >  4:261180/1‑275 (MQ=255)
                                                                                                                                                                   ttgttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGga                                                                                                                                                                                                                                                  >  5:857163/1‑144 (MQ=255)
                                                                                                                                                                    tgttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGAtt                                                                                                                                                                                                                                             <  8:592462/148‑1 (MQ=255)
                                                                                                                                                                       tCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactga                                                                                                                                                                                                                                                          >  8:1074612‑M2/1‑127 (MQ=255)
                                                                                                                                                                         cTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAACGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCATCGGGTTTAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGATATAGGAGGGATATGTTTCAGTAGAAAAAGTGAGATGTAATTTGGAAAGTGAATGACAACCCAt                                                                                                         >  1:105713/1‑275 (MQ=255)
                                                                                                                                                                            aCGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATagg                                                                                                                                                                   <  1:104236/214‑1 (MQ=255)
                                                                                                                                                                                 aTAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGaaa                                                                                                                                                                                                                                                                         <  8:1013219/107‑1 (MQ=255)
                                                                                                                                                                                 aTAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAa                                                                                                                                                                                                                                                              <  6:1100716‑M2/118‑2 (MQ=255)
                                                                                                                                                                                       tCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAg                                                                                                                                                                                                                          >  8:660624/1‑148 (MQ=255)
                                                                                                                                                                                        cATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGc                                                                                                                                                                                                                         >  5:562596/1‑148 (MQ=255)
                                                                                                                                                                                        cATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGT                                                                                                                                                                                                                                                                                    <  8:25188‑M1/89‑1 (MQ=255)
                                                                                                                                                                                             tGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATATGAGGGATATGTTTCAGTAGAAAAAGTGTGATTTACTTTGGAAATTGAATGCAAACCCATTTACTGGAAAAGGAAGATGa                                                                                     >  4:309399/1‑275 (MQ=255)
                                                                                                                                                                                              gaagaaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGaaa                                                                                                                                                                                                                                                                         >  6:422954/1‑94 (MQ=255)
                                                                                                                                                                                               aagaaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTAc                                                                                                                                                                                                                                           <  7:665198/123‑1 (MQ=255)
                                                                                                                                                                                               aagaaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTAc                                                                                                                                                                                                                                           >  8:665198/1‑123 (MQ=255)
                                                                                                                                                                                               aagaaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgt                                                                                                                                                                                                                  <  6:562596/148‑1 (MQ=255)
                                                                                                                                                                                                agaaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGT                                                                                                                                                                                                                                                                                    <  5:220586‑M1/81‑1 (MQ=255)
                                                                                                                                                                                                  aaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttga                                                                                                                                                                                                               <  7:660624/148‑1 (MQ=255)
                                                                                                                                                                                                    ccTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCCCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGGAGTTATAGGAGGGATGTGTTTCAGTAGAAAAAGTGGGATGTACTTTGGAAATTTATTGCCAACCCATTTCCTGGAAAAGGCAGAtataccagac                                                                              >  4:524807/1‑266 (MQ=255)
                                                                                                                                                                                                     cTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCg                                                                                                                                                                                                                     <  5:394812/139‑1 (MQ=255)
                                                                                                                                                                                                      tATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTc                                                                                                                                                                                                                                                                                   <  5:307613/76‑1 (MQ=255)
                                                                                                                                                                                                      tATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCgg                                                                                                                                                                                                                                                   >  6:840217/1‑108 (MQ=255)
                                                                                                                                                                                                       aTTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttgagttga                                                                                                                                                                                                          >  7:1116108/1‑148 (MQ=255)
                                                                                                                                                                                                         ttAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactg                                                                                                                                                                                                                                                           <  8:172643‑M2/97‑5 (MQ=255)
                                                                                                                                                                                                         ttAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGaa                                                                                                                    >  1:40345/1‑232 (MQ=255)
                                                                                                                                                                                                            atcatcATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATAtt                                                                                                                                                                                   >  2:459169/1‑166 (MQ=255)
                                                                                                                                                                                                             tcatcaTGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATNATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGcc                                                                                                                <  3:40345/232‑1 (MQ=255)
                                                                                                                                                                                                              catcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGgatgat                                                                                                                                                                                                                                              <  6:946803/105‑1 (MQ=255)
                                                                                                                                                                                                              catcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGgatgat                                                                                                                                                                                                                                              >  5:946803/1‑105 (MQ=255)
                                                                                                                                                                                                                tcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGgatgat                                                                                                                                                                                                                                              <  7:366811/103‑1 (MQ=255)
                                                                                                                                                                                                                tcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGgatgat                                                                                                                                                                                                                                              >  8:366811/1‑103 (MQ=255)
                                                                                                                                                                                                                 catGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactga                                                                                                                                                                                                                                                          >  7:826688‑M2/1‑85 (MQ=255)
                                                                                                                                                                                                                 catGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactga                                                                                                                                                                                                                                                          <  8:826688‑M2/90‑6 (MQ=255)
                                                                                                                                                                                                                 catGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATtctc                                                                                                                                                                                                                                     <  7:290540/111‑1 (MQ=255)
                                                                                                                                                                                                                    gtgCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACgg                                                                                                                                                                                             >  7:246843/1‑148 (MQ=255)
                                                                                                                                                                                                                      gCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatc                                                                                                                                                                                                                                                     <  5:603245‑M2/90‑11 (MQ=255)
                                                                                                                                                                                                                      gCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatc                                                                                                                                                                                                                                                     >  6:603245‑M2/1‑80 (MQ=255)
                                                                                                                                                                                                                      gCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATtct                                                                                                                                                                                                                                      <  8:633634/105‑1 (MQ=255)
                                                                                                                                                                                                                      gCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATtct                                                                                                                                                                                                                                      >  7:633634/1‑105 (MQ=255)
                                                                                                                                                                                                                      gCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAg                                                                                                                                                                                           >  5:706540/1‑148 (MQ=255)
                                                                                                                                                                                                                       cAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGT                                                                                                                                                                                                                                                                                    >  7:771493‑M1/1‑58 (MQ=255)
                                                                                                                                                                                                                       cAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGT                                                                                                                                                                                                                                                                                    <  8:771493‑M1/58‑1 (MQ=255)
                                                                                                                                                                                                                        aaaaCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACgg                                                                                                                                                                                             >  6:45861/1‑144 (MQ=255)
                                                                                                                                                                                                                          aaCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGAAGAAGGCATGTTAAAGTACGCCt                                                        >  4:363653/1‑275 (MQ=255)
                                                                                                                                                                                                                               gCAAACACACCGCGGTGTCCGCATTCGATTTCGGAGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTa                                                                                                                                                                                  <  6:706540/148‑1 (MQ=255)
                                                                                                                                                                                                                                  aaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTAc                                                                                                                                                                                                                                           >  6:291042/1‑88 (MQ=255)
                                                                                                                                                                                                                                  aaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCaa                                                                                                                                                                                                                            <  7:21290/103‑1 (MQ=255)
                                                                                                                                                                                                                                   acacacCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCa                                                                                                                                                                                                                                   <  6:103582/95‑1 (MQ=255)
                                                                                                                                                                                                                                    cacacCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGgatgat                                                                                                                                                                                                                                              >  7:893662/1‑83 (MQ=255)
                                                                                                                                                                                                                                    cacacCGCGGTGTCAGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGgatgat                                                                                                                                                                                                                                              <  8:893662/83‑1 (MQ=255)
                                                                                                                                                                                                                                         cgcgGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGaa                                                                                                                                                                                                         <  8:239281/115‑1 (MQ=255)
                                                                                                                                                                                                                                                       tCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTaa                                                                                                                                                                                 >  5:467315/1‑125 (MQ=255)
                                                                                                                                                                                                                                                           tttCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTc                                                                                                                                                      <  6:346782/148‑1 (MQ=255)
                                                                                                                                                                                                                                                            ttCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGa                                                                                                                                                                                            >  5:802537/1‑109 (MQ=255)
                                                                                                                                                                                                                                                            ttCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGa                                                                                                                                                                                            <  6:9357/109‑1 (MQ=255)
                                                                                                                                                                                                                                                            ttCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGa                                                                                                                                                                                            >  5:9357/1‑109 (MQ=255)
                                                                                                                                                                                                                                                            ttCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGa                                                                                                                                                                                            <  6:802537/109‑1 (MQ=255)
                                                                                                                                                                                                                                                                gcgcATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAgg                                                                                                                                                                                                      <  6:950086/95‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCaaa                                                                                                                                                                                                                           >  5:1117147/1‑71 (MQ=255)
                                                                                                                                                                                                                                                                     ctgATAATCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaata                                                                                                                                                                                    >  5:840217‑M1/2‑12 (MQ=255)
                                                                                                                                                                                                                                                                      tGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAaca                                                                                                                                                                               <  8:316158/112‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAg                                                                                                                                           >  7:382155/1‑148 (MQ=255)
                                                                                                                                                                                                                                                                       gATAATCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgc                                                                                                                                                                                                    >  6:487020‑M1/1‑10 (MQ=255)
                                                                                                                                                                                                                                                                       gATAATCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgc                                                                                                                                                                                                    <  5:487020‑M1/90‑81 (MQ=255)
                                                                                                                                                                                                                                                                        aTAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacatacctt                                                                                                                                         >  6:1084941‑M2/1‑30 (MQ=255)
                                                                                                                                                                                                                                                                        aTAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAgtg                                                                                                                                         <  8:382155/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                          aaTCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttac                                                                                                                                       <  6:450939‑M1/148‑142 (MQ=255)
                                                                                                                                                                                                                                                                            tCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcagga                                                                                                                                                     <  7:1074612‑M1/132‑128 (MQ=255)
                                                                                                                                                                                                                                                                             cAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaa                                                                                                                                                                                       >  7:172643‑M1/1‑4 (MQ=255)
                                                                                                                                                                                                                                                                             cAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttg                                                                                                                                                                                                                <  5:59661/72‑1 (MQ=255)
                                                                                                                                                                                                                                                                             cAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttg                                                                                                                                                                                                                >  6:59661/1‑72 (MQ=255)
                                                                                                                                                                                                                                                                              aGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGt                                                                                                                                   <  6:1127033/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                                ttccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttat                                                                                                                                                               >  5:1100716‑M1/1‑1 (MQ=255)
                                                                                                                                                                                                                                                                                ttccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatg                                                                                                                                                                                            <  5:705419‑M1/89‑89 (MQ=255)
                                                                                                                                                                                                                                                                                ttccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatg                                                                                                                                                                                            >  6:705419‑M1/1‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTa                                                                                                                                                                           >  3:107921/1‑106 (MQ=255)
                                                                                                                                                                                                                                                                                tCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGaaaa                                                                                                                                             >  4:173708/1‑136 (MQ=255)
                                                                                                                                                                                                                                                                                tCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTAc                                                                                                                                 >  7:355642/1‑148 (MQ=255)
                                                                                                                                                                                                                                                                                tCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGga                         <  2:379302/252‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tCCGGCCTGAAAAGGTCGGGGAACTGAATATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTCACACGTAGCTCTAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGTAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTTCCTTCGGGAGCTTATGCTCTTTTTGTTCAATc  >  1:75535/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                  
CGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGTAGCATTCAACGGAAGTGACGCGGCCTGAAGAATCGCGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACTTTGGAAATTGAATGCCAACCCATTTACTGGAAAAGGCAGATGACACTGACGAATGCATGTTGAAGTACGCCTGAAATGGCCTCATCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATC  >  NC_000913/4533867‑4534413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.