New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2304722 =23 (0.150)12 (0.080) 7/252 NT 18.5% noncoding (306/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 3042447 = 84 (0.560)noncoding (127/155 nt) REP210 (repetitive extragenic palindromic) element; contains 3 REP sequences REP210 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 108 total aligned reads displayed.

AGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCAT  >  NC_000913/3042190‑3042707
                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                    
aGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGGCtt                                                                                                                                                                                                                                                     >  2:303439/1‑275 (MQ=255)
                    atGGAACCGGATTGCCTTTTCCGGTTAAGCGACGGTGCGAATACTTTGCATATCGGGCCGCTTCCGTTTTCGCGCGAATAGTAAATCTCTTTATCGCATCAGGAATTGATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCAt                                                                                                                                                                                                                                  <  4:437217/274‑1 (MQ=38)
                     tGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATa                                                                                                                                                                                                                                 <  1:100578/274‑1 (MQ=255)
                             gATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCCGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGCAGAGGCCCGTAGATCGGAAAAGGCGATCACGCCGACTCCGGCAGTTGTGCACCGGATCCTGAGGCGACGCTGGCGGGTCTTAATAGGCCTACAAAGGCAAACCCATTACg                                                                                                                                                                                                                        >  4:209873/1‑275 (MQ=255)
                              tgctgctCTTCCGCGACAACGAAGATGCGAGTACATCTCATATCGGGCGGATGCGGTATTCGCTGGAAGATTAAATCACTTTTCCGCAGCAGACGCTTATCGACTGATGGGACGATGGGGGGTCTTATCATGTCTGGGATTTGATGCCTTAATCGCAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCTGATTCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGACAACAAAGGCATACCCATTACGc                                                                                                                                                                                                                       <  4:139459/269‑1 (MQ=255)
                                    gctggcgggTACGCGACGATGTGAAAACATGGCAGATCGAGCCGCGGCCGTATTGACTCGAAGAGTAAATCTCTTTATCGCATCAGGAATTTAGCGCCGGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGcc                                                                                                                                                                                                                  <  4:52602/266‑1 (MQ=255)
                                     atgccGCGTACGAGACGATTGGAATAATTGGCATAGCGAGCCGCGTCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTATTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGcc                                                                                                                                                                                                                  <  1:146553/270‑1 (MQ=39)
                                       tCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACCAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCCCCGATGCCTGATTCGACCCTGGCCCGTCTTATCCGGCCTACAAAGCCAAACCCATTCCGccgtcccct                                                                                                                                                                                                               >  4:468793/1‑267 (MQ=255)
                                           cgTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCAt                                                                                                                                                                                                                                  <  2:468794/251‑1 (MQ=255)
                                                gcgACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGACCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCCCCGATGCCTGATGCGACGCTGGCGCGGCTTATCAGGCCTAAAAAGGGATACCCATTTGCCCCTCCCAATAAACaaaaa                                                                                                                                                                                                     >  4:458208/1‑273 (MQ=255)
                                                   acgaTGCGAATACATTCCATATCGGGCCGCGGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTTTCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATGTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGAt                                                                                                                                                                                                  <  4:303438/275‑1 (MQ=255)
                                                        gagAATACAGGGCAATTCGCGCCGCTTGCGTATTTGCTCGAAGAGTAAATCCTGTGATGGCATGAGGAATTGAGCGCCGTATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGACTGTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAAGATACAAATAGATCGCCa                                                                                                                                                                                             <  4:55110/273‑1 (MQ=255)
                                                          gaaatatgtgaatatCGAGCCCCTGCCGTATTCGCTAGAAGAGTAAATCTCTTTATCGCATCAGGCATTGATCGCATGAGGGGACGCTGGCGAGTGTTAGCATGTATGGGATTGGATGCCTGTAGCACAACAGGTAAGAGGCCCGTAGATAGGAGAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGAGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGa                                                                                                                                                                                           <  4:431215/264‑1 (MQ=255)
                                                                 ttGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAACCCCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGTTTTGATGCCTTTATCACAACAGGGACGAGGCCTGACGATCGGTTAAGGCGTTCACGCCGAATACGGCAGTTGTGCTCCGATGCCTGATTCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGACAACCCCTTTCGCCTACCAAATACAAACATTAATCCCCAGAAACTgg                                                                                                                                                                                     >  4:322920/1‑274 (MQ=255)
                                                                  tGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGc                                                                                                                                                                                                                   >  4:441521/1‑243 (MQ=255)
                                                                      tatCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCaa                                                                                                                                                                                                               <  2:441522/243‑1 (MQ=255)
                                                                                        ttCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAg                                                                                                                                                             <  2:419376/275‑1 (MQ=255)
                                                                                                     aaaaTCTCTTTATCGCATAAGGCAGTTATCCACGGAGGCGACGCTGGGGCGGCTGATCATGTCTGGGAGTTAATGCCTTTATCACAACAGGGAAGAGGCCCGTAGATCGGATAAGGCGTTAACGCCGAAACCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATgg                                                                                                                                                <  2:168691/274‑1 (MQ=255)
                                                                                                       aaTCTCTTTATCTCATCAGGCTTTTATCGCCTGATTCTACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGCCGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGACTCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCa                                                                                                                                              <  2:27197/275‑1 (MQ=255)
                                                                                                       aaTCTCTTTACTGCATCAGGCATTTATCGCCTGATGCGCCGCGGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCa                                                                                                                                              <  2:458209/275‑1 (MQ=255)
                                                                                                             tttATCGCATCAGGGTTTTTGGGCCGGGTGCGACCGTGGCGCGTTTTAGCATGTTGGGGATTTGAGTCCTTAAGCCCAACAGGGACGGGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGtt                                                                                                                                         <  4:438331/274‑1 (MQ=38)
                                                                                                                                 atgCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTAt                                                                                                                                                                                                                                                   <  6:394434/146‑1 (MQ=255)
                                                                                                                                        aTGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTGCGATGCCTGATGCGACCCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAAAGTACAAATAGCACGCCAAAAAGTGGCACAGACTCCCGCCGAGCACGAAGGCGGGCCAAAGGGGATGGTGGTATGGAATGGGGTTGAAGACGTAGaaa                                                                                                             >  4:365529/1‑275 (MQ=255)
                                                                                                                                               gCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACaaa                                                                                                                                                                                                                                       >  6:1079499/1‑146 (MQ=255)
                                                                                                                                               gCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACaaa                                                                                                                                                                                                                                       <  5:1079499/146‑1 (MQ=255)
                                                                                                                                                         cTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGgcg                                                                                                                                                                                                                                                           >  5:718140/1‑116 (MQ=255)
                                                                                                                                                         cTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGgcg                                                                                                                                                                                                                                                           <  6:718140/116‑1 (MQ=255)
                                                                                                                                                         cTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCtt                                                                                                                                                                                                                                                     <  5:1034702/122‑1 (MQ=255)
                                                                                                                                                         cTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCtt                                                                                                                                                                                                                                                     >  6:1034702/1‑122 (MQ=255)
                                                                                                                                                           tATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACaaa                                                                                                                                                                                                                                       >  6:316570/1‑134 (MQ=255)
                                                                                                                                                              cATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATg                                                                                                                                                                                                                                                                      <  7:845952/100‑1 (MQ=255)
                                                                                                                                                              cATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATg                                                                                                                                                                                                                                                                      >  8:845952/1‑100 (MQ=255)
                                                                                                                                                                tGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTAt                                                                                                                                                                                                                                                   >  7:841897/1‑117 (MQ=255)
                                                                                                                                                                tGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTAt                                                                                                                                                                                                                                                   <  8:841897/117‑1 (MQ=255)
                                                                                                                                                                  tCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCAGACACATTACGCCTGCCCAATATACAAATAGATCACCAGAAAGTGGCACACACTACCGCCGAGCACGCAGCCATGCCAGATGGCATGGTTGTATGGAATGCGTTTGCAGACGTAGAAAATGACACCAAGAGACTAAACCCcgcc                                                                                   >  2:353677/1‑275 (MQ=255)
                                                                                                                                                                   cTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGccc                                                                                                                                                                                                                 >  5:1895/1‑148 (MQ=255)
                                                                                                                                                                     gggATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATa                                                                                                                                                                                                                                 <  2:507529/130‑1 (MQ=255)
                                                                                                                                                                       gATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATa                                                                                                                                                                                                                                 >  8:401089/1‑128 (MQ=255)
                                                                                                                                                                       gATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAg                                                                                                                                                             <  1:108739/196‑1 (MQ=255)
                                                                                                                                                                          accggctcggacgttggatgtcggatgcggcgtaaccgccttatccaacctacggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTCTTAt                                                                                                                                                                                                                                                   >  8:359513‑M2/88‑107 (MQ=255)
                                                                                                                                                                          accggctcggacgttggatgtcggatgcggcgtaaccgccttatccaacctacggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTCTTAt                                                                                                                                                                                                                                                   <  7:359513‑M2/20‑1 (MQ=255)
                                                                                                                                                                           tGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCAGACGTAGAACATCACCCCGAGCGAATAAACCACCCCGCCTACCg                                                                           >  1:87274/1‑274 (MQ=255)
                                                                                                                                                                            gATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCTCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTAcc                                                                            >  2:241488/1‑272 (MQ=255)
                                                                                                                                                                            gATGCCTTTATCACAACAGGGACGAGGCCCGTAGAGCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGCTGGATGGAATTCGGTTGCAGACGTAGAAAATCACCCCGAACGAATAAACCACGCCCCCCACCGc                                                                          >  2:417602/1‑274 (MQ=255)
                                                                                                                                                                               gCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCa                                                                                                                                                                                                                                                 >  6:523973/1‑104 (MQ=255)
                                                                                                                                                                               gCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCa                                                                                                                                                                                                                                                 <  5:523973/104‑1 (MQ=255)
                                                                                                                                                                                   ttATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCAtt                                                                                                                                                                                                                           >  6:799735/1‑122 (MQ=255)
                                                                                                                                                                                   ttATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCAtt                                                                                                                                                                                                                           <  5:799735/122‑1 (MQ=255)
                                                                                                                                                                                       ttggatgtcggatgcggcgtaaccgccttatccaacctacggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTCTTa                                                                                                                                                                                                                                                    <  7:587065‑M2/19‑1 (MQ=255)
                                                                                                                                                                                       ttggatgtcggatgcggcgtaaccgccttatccaacctacggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTCTTa                                                                                                                                                                                                                                                    >  8:587065‑M2/75‑93 (MQ=255)
                                                                                                                                                                                       cacaACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGa                                                                                                                                                                                                   >  7:50459/1‑142 (MQ=255)
                                                                                                                                                                                       cacaACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGa                                                                                                                                                                                                   <  8:50459/142‑1 (MQ=255)
                                                                                                                                                                                          aacaGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGt                                                                                                                                                                                                                                                        <  6:327032/86‑1 (MQ=255)
                                                                                                                                                                                          aacaGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGt                                                                                                                                                                                                                                                        >  5:327032/1‑86 (MQ=255)
                                                                                                                                                                                           acaGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATc                                                                                                                                                                                                                                                  <  5:143013/91‑1 (MQ=255)
                                                                                                                                                                                           acaGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATc                                                                                                                                                                                                                                                  >  6:143013/1‑91 (MQ=255)
                                                                                                                                                                                           acaGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTCCCAGATGGCCTGGTTGTATGGAATGCGTTTGCAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCACGGAAGGTAACGCtc                                                          >  4:501590/1‑274 (MQ=255)
                                                                                                                                                                                                gACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATc                                                                                                                                                                                                                                                  >  7:158882/1‑86 (MQ=255)
                                                                                                                                                                                                gACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATc                                                                                                                                                                                                                                                  <  8:158882/86‑1 (MQ=255)
                                                                                                                                                                                                 aCGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATc                                                                                                                                                                                                                                                  <  7:973288/85‑1 (MQ=255)
                                                                                                                                                                                                    aGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACaaa                                                                                                                                                                                                       >  3:24551/1‑125 (MQ=255)
                                                                                                                                                                                                        ccGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGa                                                                                                                                                                                                   <  1:24551/125‑1 (MQ=255)
                                                                                                                                                                                                         cGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAAt                                                                                                                                                                                                      <  8:482469/121‑1 (MQ=255)
                                                                                                                                                                                                         cGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAAt                                                                                                                                                                                                      >  7:482469/1‑121 (MQ=255)
                                                                                                                                                                                                          gTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGc                                                                                                                                                                                                                                    >  8:1080502/1‑90 (MQ=255)
                                                                                                                                                                                                          gTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGc                                                                                                                                                                                                                                    <  7:1080502/90‑1 (MQ=255)
                                                                                                                                                                                                           tAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTAccg                                                                                                                                                                         >  7:424688/1‑148 (MQ=255)
                                                                                                                                                                                                               tCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGa                                                                                                                                                                     <  8:424688/148‑1 (MQ=255)
                                                                                                                                                                                                                ccttatccgacctacggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTCTTATCAg                                                                                                                                                                                                                                                <  6:1111835‑M2/23‑1 (MQ=255)
                                                                                                                                                                                                                ccttatccgacctacggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTCTTATCAg                                                                                                                                                                                                                                                >  5:1111835‑M2/50‑72 (MQ=255)
                                                                                                                                                                                                                cGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCAGACGTAGAAGATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGc                                      >  2:125235/1‑274 (MQ=255)
                                                                                                                                                                                                                cGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAACCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCAGACGAAGAAAATCACACCGAGCGAATAAACCACGCAGCCTACCGCCAGTAAGGTAACGCTCCCCGCCGCGAGCTTAACttc                                      >  4:350804/1‑272 (MQ=255)
                                                                                                                                                                                                                   tatccgacctacggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTCTTATCAg                                                                                                                                                                                                                                                >  5:322631‑M2/47‑69 (MQ=255)
                                                                                                                                                                                                                   tatccgacctacggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTCTTATCAg                                                                                                                                                                                                                                                <  6:322631‑M2/23‑1 (MQ=255)
                                                                                                                                                                                                                     aaGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGa                                                                                                                                                               >  8:923510/1‑148 (MQ=255)
                                                                                                                                                                                                                      ccaacctacggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTc                                                                                                                                                                                                                                                       <  8:804039‑M2/16‑1 (MQ=255)
                                                                                                                                                                                                                      ccaacctacggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTc                                                                                                                                                                                                                                                       >  7:804039‑M2/44‑59 (MQ=255)
                                                                                                                                                                                                                       gggtgtCACGCCGAATCGGGCATGTTTGCTCCGATGCCTGGGGCGCGGCTGGGCGGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCAAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCAt                              <  4:340690/270‑1 (MQ=255)
                                                                                                                                                                                                                          gTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCg                                                                                                                                                          <  7:923510/148‑1 (MQ=255)
                                                                                                                                                                                                                           ttCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACaaa                                                                                                                                                                                                                                       >  7:167370/1‑70 (MQ=255)
                                                                                                                                                                                                                           ttCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACaaa                                                                                                                                                                                                                                       >  5:1007169/1‑70 (MQ=255)
                                                                                                                                                                                                                           ttCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACaaa                                                                                                                                                                                                                                       <  6:1007169/70‑1 (MQ=255)
                                                                                                                                                                                                                             cACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCAGACGTAGAAAATCACCCNGAGCGAATAAACCAGGCCGCCTACCGCCAGTAAGCTAACCACCACCCCCTCGAACTCAACTGCCAttcaaaaaaaa                         >  3:120536/1‑265 (MQ=255)
                                                                                                                                                                                                                               ggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTCTTa                                                                                                                                                                                                                                                    <  6:182357‑M2/19‑1 (MQ=255)
                                                                                                                                                                                                                               ggggtggagcacttcacagcggtgtaggcctgatGCGACGCTGGCGCGTCTTa                                                                                                                                                                                                                                                    >  5:182357‑M2/35‑53 (MQ=255)
                                                                                                                                                                                                                                   gAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCa                                                                                                                                                                                                                <  5:180422/85‑1 (MQ=255)
                                                                                                                                                                                                                                   gAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCa                                                                                                                                                                                                                >  6:180422/1‑85 (MQ=255)
                                                                                                                                                                                                                                                   cTCCGATGCCTTATGCTACGCTGGCGCGTCTTATCAGGCATACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCAt  <  1:51022/275‑1 (MQ=255)
                                                                                                                                                                                                                                                    tCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTa                                                                                                                                      <  7:561144/142‑1 (MQ=255)
                                                                                                                                                                                                                                                    tCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTa                                                                                                                                      >  8:561144/1‑142 (MQ=255)
                                                                                                                                                                                                                                                     ccGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCa                                                                                                                                                     >  5:163730/1‑126 (MQ=255)
                                                                                                                                                                                                                                                     ccGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCa                                                                                                                                                     <  6:163730/126‑1 (MQ=255)
                                                                                                                                                                                                                                                        aTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGc                                                                                                                                                                                                                   >  4:163071/1‑61 (MQ=255)
                                                                                                                                                                                                                                                            ctgatGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCaa                                                                                                                                                                                                               <  2:163072‑M2/56‑1 (MQ=255)
                                                                                                                                                                                                                                                            ctgatGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCAt                                                                                                                                             <  5:309040‑M2/122‑1 (MQ=255)
                                                                                                                                                                                                                                                            ctgatGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCAt                                                                                                                                             >  6:309040‑M2/6‑127 (MQ=255)
                                                                                                                                                                                                                                                             tgatGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAat                                                                                                                                                                                                              <  7:684900‑M2/57‑1 (MQ=255)
                                                                                                                                                                                                                                                             tgatGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAat                                                                                                                                                                                                              >  8:684900‑M2/5‑61 (MQ=255)
                                                                                                                                                                                                                                                                tGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGc                                                                                                                                                                                                                   >  4:158438‑M2/2‑53 (MQ=255)
                                                                                                                                                                                                                                                                tGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTg                                                                                                                         >  2:66675‑M2/2‑143 (MQ=255)
                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                    
AGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAAATCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTTTGCAGACGTAGAAAATCACCCCGAGCGAATAAACCACGCCGCCTACCGCCAGTAAGGTAACGCTGCCCGCCGCGAGCTTAACTGCCATTTCATAAATTACCACCAGCGACAGCCAGCCCAT  >  NC_000913/3042190‑3042707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.