| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2042125 | 75 (0.800) | 12 (0.140) | 8/180 | NT | 14.2% | intergenic (+100/‑243) | zinT/yodB | zinc and cadmium binding protein, periplasmic/cytochrome b561 homolog |
| ? | NC_000913 | = 2042138 | 77 (0.920) | intergenic (+113/‑230) | zinT/yodB | zinc and cadmium binding protein, periplasmic/cytochrome b561 homolog | |||||
TATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAAATGATGTCTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2041969‑2042125‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacagacacgTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATGAGAATACTCAATGAGACATCATTTCCTCGACCACTTCT < NC_000913/2042138‑2041995 TATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCT > 2:471571/1‑148 TATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAAATGATGTCTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACG > 3:1071966/1‑148 GAAGAAGTGGTCGAGGAAATGATGTCTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCG < 2:462411/148‑1 GAAGTGGTCGAGGAAATGATGTCTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGT < 4:1071966/148‑1 GTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGT < 4:1114950/118‑1 GTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGT > 3:1114950/1‑118 TCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGATACGTCATAGTGATGAGCG > 4:821384/1‑96 TCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCG < 3:821384/96‑1 TCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACG > 3:709119/1‑81 TCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACG < 4:709119/81‑1 AAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGT < 1:978094/83‑1 AAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGT > 2:978094/1‑83 TTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCG > 2:1098175/1‑77 TTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCG < 1:1098175/77‑1 CATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCT < 1:988400/78‑1 CATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCT > 2:988400/1‑78 TCCACAAACGCCACTGAACGCAAGCTAGCTACAGA > 2:141818/1‑35 TCCACAAACGCCACTGAACGCAAGCTAGCTACAGA < 1:141818/35‑1 ACAGACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGA < 4:183072/103‑1 ACAGACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGA > 3:183072/1‑103 CAGACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTT > 2:382848/1‑86 CAGACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTT < 1:382848/86‑1 aACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGA > 2:894002/2‑100 GACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATGAGAATACTCAATGAGACATCATTTCCTCGACCACTT > 1:471571/1‑148 GACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATGAGAAT < 4:492047/117‑1 GACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATGAGAAT > 3:492047/1‑117 GACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGA < 1:894002/100‑1 GACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTA < 2:108298/85‑1 GACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTA > 1:108298/1‑85 ACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATGAGAATACTCAATGAGACATCATTTCCTCGACCACTTC > 3:852862/1‑148 CACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGTGTTATCATGAGAATACTCAATGAGACATCATTTCCTCGACCACTTCT < 4:852862/148‑1 CACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATGAGAATACTCAATGAGACATCATTTCCTCGA < 2:57131/140‑1 CACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATGAGAATACTCAATGAGACATCATTTCCTCGA > 1:57131/1‑140 CACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATG < 2:386479/110‑1 CACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATG > 1:386479/1‑110 CACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTT < 2:709890/82‑1 CACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTT > 1:709890/1‑82 CGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATGAGAATACTCAATGAGACATCATTT > 2:833449/1‑132 CGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATGAGAATACTCAATGAGACATCATTT < 1:833449/132‑1 CGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAG < 2:15447/68‑1 CGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAG > 1:15447/1‑68 CGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGAT > 3:425328/1‑55 CGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGAT < 4:425328/55‑1 TATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAAATGATGTCTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2041969‑2042125‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacagacacgTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCGTTATCATGAGAATACTCAATGAGACATCATTTCCTCGACCACTTCT < NC_000913/2042138‑2041995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |