BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 93541	90 (0.960)	13 (0.140)	11/194	NT	13.0%	coding (376/1488 nt)	murE	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate:meso‑ diaminopimelate ligase
*	?	NC_000913	= 93563	87 (0.960)	13 (0.140)	11/194	NT	13.0%	coding (398/1488 nt)	murE	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate:meso‑ diaminopimelate ligase

Only 100 of 131 total aligned reads displayed.

GTGAAATGCACGGCGTACCGGTCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGATC  >  NC_000913/93395‑93688

gTGAAATGCACGGCGTACCGGTCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCt                                                                                                                                                    >  4:461920/1‑148 (MQ=255)

 tGAAATGCACGGCGTACCGGTCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCag                                                                                                                                                   >  1:940344‑M1/1‑146 (MQ=255)

  gAAATGCACGGCGTACCGGTCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGt                                                                                                                                                  <  2:113438/148‑1 (MQ=255)

        cACGGCGTACCGGTCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGgcgc                                                                                                                                            >  4:559413/1‑148 (MQ=255)

           ggCGTACCGGTCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGt                                                                                                                                         <  2:633291/148‑1 (MQ=255)

                   ggTCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCaa                                                                                                                                 <  4:1103495/148‑1 (MQ=255)

                     tCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCagttggctccactgcgccaaca                                                                                                                               <  4:1106915‑M1/148‑23 (MQ=255)

                        tctatctCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTgct                                                                                                                            >  3:559413‑M2/1‑145 (MQ=255)

                             ctcAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCagttggctccactgcgccaacagc                                                                                                                             >  2:240906‑M1/1‑118 (MQ=255)

                             ctcAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCagttggctccactgcgccaacagc                                                                                                                             <  1:240906‑M1/142‑25 (MQ=255)

                             ctcAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTgg                                                                                                                                       <  4:768100/132‑1 (MQ=255)

                               cagccagcTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGaa                                                                                                                     >  4:381702/1‑148 (MQ=255)

                                   cagcTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCa                                                                                                                 <  3:381702/148‑1 (MQ=255)

                                     gcTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAgc                                                                                                               <  1:1066006/148‑1 (MQ=255)

                                      cTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTgg                                                                                                                                       <  3:1117820/123‑1 (MQ=255)

                                                  ttATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGc                                                                                                                                    <  3:750921/114‑1 (MQ=255)

                                                  ttATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGc                                                                                                                                    >  4:750921/1‑114 (MQ=255)

                                                         cACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGc                                                                                                   <  2:418326/140‑1 (MQ=255)

                                                         cACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGc                                                                                                   >  1:418326/1‑140 (MQ=255)

                                                          aCTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTgg                                                                                                                                       <  4:175511/103‑1 (MQ=255)

                                                          aCTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTgg                                                                                                                                       >  3:175511/1‑103 (MQ=255)

                                                                    cGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCctgc                                                                                >  3:100260/1‑148 (MQ=255)

                                                                      cTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCctgctg                                                                              >  1:560450/1‑148 (MQ=255)

                                                                        tttACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCagttggctccactgcgccaacagct                                                                                                                            <  3:428481‑M1/100‑26 (MQ=255)

                                                                        tttACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTgg                                                                                                                                       <  3:1108473/89‑1 (MQ=255)

                                                                        tttACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTgg                                                                                                                                       >  4:1108473/1‑89 (MQ=255)

                                                                        tttACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCa                                                                                                  >  1:1074015/1‑126 (MQ=255)

                                                                        tttACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCctgctg                                                                              <  1:242014/146‑1 (MQ=255)

                                                                        tttACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCctgctg                                                                              >  2:242014/1‑146 (MQ=255)

                                                                        ttcaCCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCa                                                                                                  <  2:1074015/123‑1 (MQ=255)

                                                                         ttACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCtt                                                                                                                           <  2:751048/100‑1 (MQ=255)

                                                                               tGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAGACCACGACTACCCAGCTGTTGGCGCAGTGGAg                                                                                                                                     <  2:88763/84‑1 (MQ=255)

                                                                               tGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAg                                                                                                                                     >  1:88763/1‑84 (MQ=255)

                                                                               tGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGtt                                                                                             >  4:814496/1‑124 (MQ=255)

                                                                               tGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGtt                                                                                             <  3:814496/124‑1 (MQ=255)

                                                                                gAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCCAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGa                                                                    <  4:100260/148‑1 (MQ=255)

                                                                                 aaCCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAg                                                                                                                                     >  4:509230/1‑82 (MQ=255)

                                                                                 aaCCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAg                                                                                                                                     <  3:509230/82‑1 (MQ=255)

                                                                                 aaCCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGAt                                                                   <  2:560450/148‑1 (MQ=255)

                                                                                     ctctGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCagttggctccactgcgccaacag                                                                                                                              >  3:574860‑M1/1‑62 (MQ=255)

                                                                                      tctGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTgct                                                                                                                            <  3:505498‑M2/86‑4 (MQ=255)

                                                                                         gACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATggg                                                                                                    <  1:827548/107‑1 (MQ=255)

                                                                                         gACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATggg                                                                                                    >  2:827548/1‑107 (MQ=255)

                                                                                          aCAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCagttggctccactgcgccaacagc                                                                                                                             >  4:1085903‑M1/1‑57 (MQ=255)

                                                                                          aCAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCagttggctccactgcgccaacagc                                                                                                                             <  3:1085903‑M1/81‑25 (MQ=255)

                                                                                          aCAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGaa                                                                         >  2:570497/1‑133 (MQ=255)

                                                                                          aCAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGaa                                                                         <  1:570497/133‑1 (MQ=255)

                                                                                          aCAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGa                                                          >  2:198728/1‑148 (MQ=255)

                                                                                              tttACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGaa                                                                         <  2:765220/129‑1 (MQ=255)

                                                                                              tttACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGaa                                                                         >  1:765220/1‑129 (MQ=255)

                                                                                              tttACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATcc                                                                 <  1:325172/137‑1 (MQ=255)

                                                                                              tttACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATcc                                                                 >  2:325172/1‑137 (MQ=255)

                                                                                              tttACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAAt                                                      <  1:508919/148‑1 (MQ=255)

                                                                                               ttACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCagttggctccactgcgccaacag                                                                                                                              <  4:712777‑M1/75‑24 (MQ=255)

                                                                                               ttACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCagttggctccactgcgccaacag                                                                                                                              >  3:712777‑M1/1‑52 (MQ=255)

                                                                                                    tctcGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACa                                                   <  1:832126/145‑1 (MQ=255)

                                                                                                    tctcGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACa                                                   >  4:525781/1‑145 (MQ=255)

                                                                                                       cGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGcc                                                                                   >  1:744732/1‑110 (MQ=255)

                                                                                                         tGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTc                                           >  2:844774/1‑148 (MQ=255)

                                                                                                         tGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGAACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTc                                           >  1:321353/1‑148 (MQ=255)

                                                                                                          gggCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAgcgc                                                                                                             <  1:35704/81‑1 (MQ=255)

                                                                                                          gggCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAgcgc                                                                                                             >  2:35704/1‑81 (MQ=255)

                                                                                                                   gggCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATg                                                                                                      >  2:1098443/1‑79 (MQ=255)

                                                                                                                   gggCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATg                                                                                                      <  1:1098443/79‑1 (MQ=255)

                                                                                                                      cACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGAACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGtt                              <  2:321353/148‑1 (MQ=255)

                                                                                                                       aCCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTc                             <  4:197541/148‑1 (MQ=255)

                                                                                                                        ccAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGa                                  >  4:337853/1‑142 (MQ=255)

                                                                                                                          aaCGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGaaa                                                        >  3:293662/1‑118 (MQ=255)

                                                                                                                          aaCGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGaaa                                                        <  4:293662/118‑1 (MQ=255)

                                                                                                                           aCGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTgg                                                                                           <  3:2755/82‑1 (MQ=255)

                                                                                                                           aCGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTgg                                                                                           >  4:2755/1‑82 (MQ=255)

                                                                                                                               cAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATTAGCGCGGTAATGGGCACCGt                                                                                              >  3:657461/1‑75 (MQ=255)

                                                                                                                               cAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGt                                                                                              <  4:657461/75‑1 (MQ=255)

                                                                                                                               cAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAAt                                                      <  2:442161/115‑1 (MQ=255)

                                                                                                                               cAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAAt                                                      >  1:442161/1‑115 (MQ=255)

                                                                                                                               cAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAg                     >  2:195982/1‑148 (MQ=255)

                                                                                                                                 aaaCCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGa                                                                    <  2:557039/99‑1 (MQ=255)

                                                                                                                                       cGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACgg                                                                                     <  1:268531/76‑1 (MQ=255)

                                                                                                                                       cGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACgg                                                                                     >  2:268531/1‑76 (MQ=255)

                                                                                                                                         aCTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGaaa                                                        >  2:286865/1‑103 (MQ=255)

                                                                                                                                         aCTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGaaa                                                        <  1:286865/103‑1 (MQ=255)

                                                                                                                                            aCCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCtgg        <  1:195982/148‑1 (MQ=255)

                                                                                                                                             cccAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCtggt       <  1:198728/148‑1 (MQ=255)

                                                                                                                                               cAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACaa                                                  <  4:115147/103‑1 (MQ=255)

                                                                                                                                               cAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACaa                                                  >  3:115147/1‑103 (MQ=255)

                                                                                                                                               cAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGt                                     >  2:877749/1‑116 (MQ=255)

                                                                                                                                               cAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGt                                     <  1:877749/116‑1 (MQ=255)

                                                                                                                                                agcagttggctccactgcgccaacagctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagagggttcatggtaaaagcggcccgccagtgcagataaacgctcgttgagctggctgagataga    >  3:559413‑M1/1‑3 (MQ=255)

                                                                                                                                                agcagttggctccactgcgccaacagctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcaga                                                                  <  3:505498‑M1/86‑84 (MQ=255)

                                                                                                                                                agcagttggctccactgcgccaacagctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcaga                                                                  >  4:505498‑M1/1‑3 (MQ=255)

                                                                                                                                                aGCTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagagggttcatggtaaa                                                    >  4:428481‑M2/1‑25 (MQ=255)

                                                                                                                                                aGCTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagagggttcatggtaaa                                                    <  3:428481‑M2/100‑76 (MQ=255)

                                                                                                                                                aGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGa    <  3:234293/148‑1 (MQ=255)

                                                                                                                                                 gCTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgt                                                                      <  3:1085903‑M2/81‑58 (MQ=255)

                                                                                                                                                 gCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCa                                                                                                                 <  2:1067851/38‑1 (MQ=255)

                                                                                                                                                 gCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCa                                                                                                                 >  1:1067851/1‑38 (MQ=255)

                                                                                                                                                  cTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaa                                                                           >  3:712777‑M2/1‑23 (MQ=255)

                                                                                                                                                  cTGTTGGCGCAGTGGAGCCAACTgctgggtaggcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagag                                                                 <  4:574860‑M2/85‑63 (MQ=255)

                                                                                                                                                  cTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGATc  <  2:37779/148‑1 (MQ=255)

                                                                                                                                                  cTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGATc  >  1:37779/1‑148 (MQ=255)

GTGAAATGCACGGCGTACCGGTCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGATC  >  NC_000913/93395‑93688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.