BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 93541	90 (0.960)	13 (0.140)	11/194	NT	13.0%	coding (376/1488 nt)	murE	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate:meso‑ diaminopimelate ligase
*	?	NC_000913	= 93563	87 (0.960)	13 (0.140)	11/194	NT	13.0%	coding (398/1488 nt)	murE	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate:meso‑ diaminopimelate ligase

Only 100 of 114 total aligned reads displayed.

TCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGATCAGGGCGCGACGTTTTGCGCAA  >  NC_000913/93419‑93709

         gccagcTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAAt                                                                                                                                        >  2:1066006/1‑148 (MQ=255)

           cagcTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCa                                                                                                                                      <  3:381702/148‑1 (MQ=255)

             gcTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAgc                                                                                                                                    <  1:1066006/148‑1 (MQ=255)

                                 cACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGc                                                                                                                        <  2:418326/140‑1 (MQ=255)

                                 cACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGc                                                                                                                        >  1:418326/1‑140 (MQ=255)

                                   cTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTa                                                                                                              >  3:197541/1‑148 (MQ=255)

                                            cGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCctgc                                                                                                     >  3:100260/1‑148 (MQ=255)

                                                tttACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCa                                                                                                                       >  1:1074015/1‑126 (MQ=255)

                                                tttACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCctgctg                                                                                                   <  1:242014/146‑1 (MQ=255)

                                                ttcaCCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCa                                                                                                                       <  2:1074015/123‑1 (MQ=255)

                                                 ttACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCtt                                                                                                                                                <  2:751048/100‑1 (MQ=255)

                                                 ttACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCtt                                                                                                                                                >  1:751048/1‑100 (MQ=255)

                                                       tGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGtt                                                                                                                  <  3:814496/124‑1 (MQ=255)

                                                        gAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCCAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGa                                                                                         <  4:100260/148‑1 (MQ=255)

                                                        gAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGa                                                                                         >  2:508919/1‑148 (MQ=255)

                                                         aaCCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGAt                                                                                        <  2:560450/148‑1 (MQ=255)

                                                          aCCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGaa                                                                                              <  1:316004/141‑1 (MQ=255)

                                                          aCCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGaa                                                                                              >  2:316004/1‑141 (MQ=255)

                                                              tctGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTgct                                                                                                                                                 <  3:505498‑M2/86‑4 (MQ=255)

                                                              tctGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTgct                                                                                                                                                 >  4:505498‑M2/1‑83 (MQ=255)

                                                                 gACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATggg                                                                                                                         >  2:827548/1‑107 (MQ=255)

                                                                 gACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATggg                                                                                                                         <  1:827548/107‑1 (MQ=255)

                                                                  aCAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGaa                                                                                              >  2:570497/1‑133 (MQ=255)

                                                                  aCAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGaa                                                                                              <  1:570497/133‑1 (MQ=255)

                                                                  aCAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGa                                                                               >  2:198728/1‑148 (MQ=255)

                                                                  aCAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGa                                                                               <  3:461920/148‑1 (MQ=255)

                                                                      tttACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGaa                                                                                              >  1:765220/1‑129 (MQ=255)

                                                                      tttACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATcc                                                                                      >  2:325172/1‑137 (MQ=255)

                                                                      tttACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAAt                                                                           <  1:508919/148‑1 (MQ=255)

                                                                            tctcGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACa                                                                        <  3:525781/145‑1 (MQ=255)

                                                                            tctcGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACa                                                                        >  2:832126/1‑145 (MQ=255)

                                                                            tctcGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACa                                                                        >  4:525781/1‑145 (MQ=255)

                                                                            tctcGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAAcc                                                                     >  4:234293/1‑148 (MQ=255)

                                                                               cGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGcc                                                                                                        <  2:744732/110‑1 (MQ=255)

                                                                               cGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGcc                                                                                                        >  1:744732/1‑110 (MQ=255)

                                                                                 tGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTc                                                                >  2:844774/1‑148 (MQ=255)

                                                                                 tGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGAACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTc                                                                >  1:321353/1‑148 (MQ=255)

                                                                                  gggCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAgcgc                                                                                                                                  <  1:35704/81‑1 (MQ=255)

                                                                                  gggCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAgcgc                                                                                                                                  >  2:35704/1‑81 (MQ=255)

                                                                                   ggCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCgg                                                              <  1:844774/148‑1 (MQ=255)

                                                                                           gggCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATg                                                                                                                           <  1:1098443/79‑1 (MQ=255)

                                                                                            ggCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGAt                                                                                        >  2:158537/1‑113 (MQ=255)

                                                                                            ggCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGAt                                                                                        <  1:158537/113‑1 (MQ=255)

                                                                                              cACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGAACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGtt                                                   <  2:321353/148‑1 (MQ=255)

                                                                                               aCCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTc                                                  <  4:197541/148‑1 (MQ=255)

                                                                                                ccAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGa                                                       <  3:337853/142‑1 (MQ=255)

                                                                                                ccAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGa                                                       >  4:337853/1‑142 (MQ=255)

                                                                                                  aaCGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGaaa                                                                             >  3:293662/1‑118 (MQ=255)

                                                                                                  aaCGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGaaa                                                                             <  4:293662/118‑1 (MQ=255)

                                                                                                   aCGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTgg                                                                                                                >  4:2755/1‑82 (MQ=255)

                                                                                                       cAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATTAGCGCGGTAATGGGCACCGt                                                                                                                   >  3:657461/1‑75 (MQ=255)

                                                                                                       cAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGt                                                                                                                   <  4:657461/75‑1 (MQ=255)

                                                                                                       cAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAAt                                                                           >  1:442161/1‑115 (MQ=255)

                                                                                                       cAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAAt                                                                           <  2:442161/115‑1 (MQ=255)

                                                                                                       cAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAg                                          >  2:195982/1‑148 (MQ=255)

                                                                                                         aaaCCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGa                                                                                         >  1:557039/1‑99 (MQ=255)

                                                                                                         aaaCCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGa                                                                                         <  2:557039/99‑1 (MQ=255)

                                                                                                               cGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACgg                                                                                                          >  2:268531/1‑76 (MQ=255)

                                                                                                               cGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACgg                                                                                                          <  1:268531/76‑1 (MQ=255)

                                                                                                                 aCTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGaaa                                                                             >  2:286865/1‑103 (MQ=255)

                                                                                                                 aCTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGaaa                                                                             <  1:286865/103‑1 (MQ=255)

                                                                                                                    aCCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCtgg                             <  1:195982/148‑1 (MQ=255)

                                                                                                                     cccAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCtggt                            <  1:198728/148‑1 (MQ=255)

                                                                                                                       cAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACaa                                                                       <  4:115147/103‑1 (MQ=255)

                                                                                                                       cAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACaa                                                                       >  3:115147/1‑103 (MQ=255)

                                                                                                                       cAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGt                                                          >  2:877749/1‑116 (MQ=255)

                                                                                                                       cAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGt                                                          <  1:877749/116‑1 (MQ=255)

                                                                                                                        aGCTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagagggttcatggtaaa                                                                         <  3:428481‑M2/100‑76 (MQ=255)

                                                                                                                        aGCTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagagggttcatggtaaa                                                                         >  4:428481‑M2/1‑25 (MQ=255)

                                                                                                                        aGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGa                         <  3:234293/148‑1 (MQ=255)

                                                                                                                         gCTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagagggttcatggtaaaagcggcccgccagtgcagataaacgctcgttgagctggctgag                              <  1:240906‑M2/142‑119 (MQ=255)

                                                                                                                         gCTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagagggttcatggtaaaagcggcccgccagtgcagataaacgctcgttgagctggctgag                              >  2:240906‑M2/1‑24 (MQ=255)

                                                                                                                         gCTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgt                                                                                           <  3:1085903‑M2/81‑58 (MQ=255)

                                                                                                                         gCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCa                                                                                                                                      >  1:1067851/1‑38 (MQ=255)

                                                                                                                         gCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCa                                                                                                                                      <  2:1067851/38‑1 (MQ=255)

                                                                                                                          cTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagag                                                                                      >  3:574860‑M2/1‑23 (MQ=255)

                                                                                                                          cTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaa                                                                                                <  4:712777‑M2/75‑53 (MQ=255)

                                                                                                                          cTGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaa                                                                                                >  3:712777‑M2/1‑23 (MQ=255)

                                                                                                                          cTGTTGGCGCAGTGGAGCCAACTgctgggtaggcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagag                                                                                      <  4:574860‑M2/85‑63 (MQ=255)

                                                                                                                          cTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGATc                       >  1:37779/1‑148 (MQ=255)

                                                                                                                           tGTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagagggttcatggtaaaagcggcccgccagtgcagataaacgctcgttgagctggctgagatagatga                      <  4:1106915‑M2/148‑127 (MQ=255)

                                                                                                                            gTTGGCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagagggttcatggtaaaagcggcccgccagtgcagataaacgctcgttgagctggctgagatagatgac                     <  2:940344‑M2/148‑128 (MQ=255)

                                                                                                                               ggCGCAGTGGAGCCAACTgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagagggttcatggtaaaagcggcccgccagtgcagataaacgctcgttgagctggctgagatagctgaccgg                  >  3:1106915‑M2/1‑18 (MQ=255)

                                                                                                                                   cAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGa                                                                                         <  4:79348/73‑1 (MQ=255)

                                                                                                                                   cAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGa                                                                                         >  3:79348/1‑73 (MQ=255)

                                                                                                                                   cAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGATCAGGGCGCGa              <  2:210965/148‑1 (MQ=255)

                                                                                                                                         aGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCg                                                        <  1:942269/100‑1 (MQ=255)

                                                                                                                                          gCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGAt                                                      >  2:831164/1‑101 (MQ=255)

                                                                                                                                          gCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGAt                                                      <  1:831164/101‑1 (MQ=255)

                                                                                                                                           ccAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCtgg                             <  3:1030578/125‑1 (MQ=255)

                                                                                                                                           ccAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCtgg                             >  4:1030578/1‑125 (MQ=255)

                                                                                                                                            cAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCctgctg                                                                                                   >  1:233434/1‑54 (MQ=255)

                                                                                                                                            cAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCctgctg                                                                                                   <  2:233434/54‑1 (MQ=255)

                                                                                                                                             aaCTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACgg                                                                                                          <  2:1129447/46‑1 (MQ=255)

                                                                                                                                             aaCTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACgg                                                                                                          >  1:1129447/1‑46 (MQ=255)

                                                                                                                                              aCTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAAt                                                                           >  1:351546/1‑76 (MQ=255)

                                                                                                                                              aCTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAAt                                                                           <  2:351546/76‑1 (MQ=255)

                                                                                                                                              aCTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATg                                                     <  1:813395/98‑1 (MQ=255)

                                                                                                                                              aCTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATg                                                     >  2:813395/1‑98 (MQ=255)

                                                                                                                                               ctgctgggtagtcgtggttttgccgttggtgcccgttacgcccacgagacgtaaattgtcagagggttcatggtaaaagcggcccgccagtgcagataaacgctcgttgagctggctgagatagatgaccggtacgccgtgcatttca  >  1:940344‑M2/1‑2 (MQ=255)

TCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGATCAGGGCGCGACGTTTTGCGCAA  >  NC_000913/93419‑93709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.