BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	302247 =	96 (1.030)	6 (0.070)	5/190	NT	5.8%	coding (327/690 nt)	paoA	PaoABC aldehyde oxidoreductase, 2Fe‑2S subunit
*	?	NC_000913	302274 =	102 (1.150)	6 (0.070)	5/190	NT	5.8%	coding (300/690 nt)	paoA	PaoABC aldehyde oxidoreductase, 2Fe‑2S subunit

Only 100 of 127 total aligned reads displayed.

CACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAG  >  NC_000913/302101‑302387

cggcagctacacccgcgccagagataatgcccctgacactgaaggtgaacggcaaaaccgagcagcttgaggtggatacccgaaccacgctactggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatCa                                                                                                                                             >  1:149482‑M1/147‑148 (MQ=255)

              gcgccagagataatgcccctgacactgaaggtgaacggcaaaaccgagcagcttgaggtggatacccgaaccacgctactggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatc                                                                                                                                              >  2:652463‑M1/133‑133 (MQ=255)

              gcgccagagataatgcccctgacactgaaggtgaacggcaaaaccgagcagcttgaggtggatacccgaaccacgctactggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatc                                                                                                                                              <  1:652463‑M1/1‑1 (MQ=255)

                   tGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTg                                                                                                                          >  1:910321/1‑148 (MQ=255)

                   agagataatgcccctgacactgaaggtgaacggcaaaaccgagcagcttgaggtggatacccgaaccacgctactggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatCACgg                                                                                                                                          >  3:59642‑M1/128‑132 (MQ=255)

                   agagataatgcccctgacactgaaggtgaacggcaaaaccgagcagcttgaggtggatacccgaaccacgctactggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatCACgg                                                                                                                                          <  4:59642‑M1/5‑1 (MQ=255)

                      tAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCGAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTc                                                                                                                                 <  4:822562/138‑1 (MQ=255)

                      tAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCGAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTc                                                                                                                                 >  3:822562/1‑138 (MQ=255)

                           gccgccTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGAt                                                                                                                  <  4:140455/148‑1 (MQ=255)

                                          tGAAGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTgg                                                                                                   >  3:220278/1‑148 (MQ=255)

                                            aaGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCa                                                                                                              <  1:1016860/135‑1 (MQ=255)

                                            aaGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCa                                                                                                              >  2:1016860/1‑135 (MQ=255)

                                               aTTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGa                                                                                                                   >  3:150207/1‑127 (MQ=255)

                                                 tATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTAc                                                                                                                                       <  1:1065974/105‑1 (MQ=255)

                                                 tATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTAc                                                                                                                                       >  2:1065974/1‑105 (MQ=255)

                                                 tATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTg                                                                                                    >  3:54421/1‑140 (MQ=255)

                                                        caaccccAGCCCTCCAAAGGTGGTCATCTCGGCCCCCTGAAGCAAGCCTCAAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGCCTAGCACGGTACAGGCACTGCACTGTCCGAGATCGAAACCTTTCTTGGTACCGATCAAATGc                                                                                     <  4:220278/144‑1 (MQ=255)

                                                              cagcttgaggtggatacccgaaccacgctactggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatCACgg                                                                                                                                          >  2:157365‑M1/85‑89 (MQ=255)

                                                              cagcttgaggtggatacccgaaccacgctactggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatCACgg                                                                                                                                          <  1:157365‑M1/5‑1 (MQ=255)

                                                              cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGt                                                                                                  <  3:1040499/129‑1 (MQ=255)

                                                              cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGt                                                                                                  >  4:1040499/1‑129 (MQ=255)

                                                              cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGc                                                                                     >  2:459090/1‑142 (MQ=255)

                                                              cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGc                                                                                     <  1:459090/142‑1 (MQ=255)

                                                              cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAttt                                                                               >  4:783983/1‑148 (MQ=255)

                                                              cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAttt                                                                               >  3:194427/1‑148 (MQ=255)

                                                              cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAttt                                                                               >  1:753953/1‑148 (MQ=255)

                                                                ggCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCATGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCt                                                                                                      >  1:894143/1‑123 (MQ=255)

                                                                ggCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCATGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCt                                                                                                      <  2:894143/123‑1 (MQ=255)

                                                                ggCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCt                                                                                                      >  2:587745/1‑123 (MQ=255)

                                                                ggCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCt                                                                                                      <  1:587745/123‑1 (MQ=255)

                                                                 gCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCa                                                                            <  2:407381/148‑1 (MQ=255)

                                                                    ttCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAAcc                                                                                                           >  3:171160/1‑114 (MQ=255)

                                                                    ttCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAAcc                                                                                                           <  4:171160/114‑1 (MQ=255)

                                                                     tCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCaa                                                                                         <  1:373426/131‑1 (MQ=255)

                                                                     tCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCaa                                                                                         >  2:373426/1‑131 (MQ=255)

                                                                     tCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAtttt                                                                              >  4:107445/1‑142 (MQ=255)

                                                                      cAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACt                                                                                                                           <  2:624821/96‑1 (MQ=255)

                                                                      cAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACt                                                                                                                           >  1:624821/1‑96 (MQ=255)

                                                                        aTGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGAt                                                                                            <  3:112298/125‑1 (MQ=255)

                                                                        aTGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGAt                                                                                            >  4:112298/1‑125 (MQ=255)

                                                                         tggtggTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACgg                                                                                                                                          >  4:276467/1‑78 (MQ=255)

                                                                         tggtggTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACgg                                                                                                                                          <  3:276467/78‑1 (MQ=255)

                                                                          ggtggtGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCaaa                                                                                        >  4:216518/1‑127 (MQ=255)

                                                                           atacccgaaccacgctactggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatCACGGTACAGGCTCCGCACTGTCCg                                                                                                                      <  4:447562‑M1/25‑1 (MQ=255)

                                                                            tggtgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTc                                                                 <  2:753953/148‑1 (MQ=255)

                                                                             ggtgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAt                                                                                 >  4:578428/1‑131 (MQ=255)

                                                                             ggtgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAt                                                                                 <  3:578428/131‑1 (MQ=255)

                                                                               tgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCa                                                                                                              >  2:705703/1‑100 (MQ=255)

                                                                               tgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTg                                                                                                    >  3:397416/1‑110 (MQ=255)

                                                                               tgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTg                                                                                                    <  4:397416/110‑1 (MQ=255)

                                                                                cgaaccacgctactggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatCa                                                                                                                                             >  4:839246‑M1/67‑68 (MQ=255)

                                                                                cgaaccacgctactggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatCa                                                                                                                                             <  3:839246‑M1/2‑1 (MQ=255)

                                                                                 aTCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTc                                                                                                                                 >  1:252589/1‑79 (MQ=255)

                                                                                 aTCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTc                                                                                                                                 <  2:252589/79‑1 (MQ=255)

                                                                                 aTCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGAt                                                                                                                  >  1:510109/1‑94 (MQ=255)

                                                                                 aTCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGAt                                                                                                                  <  2:510109/94‑1 (MQ=255)

                                                                                    tcGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCg                                                         <  4:194427/148‑1 (MQ=255)

                                                                                     cGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAAt                                                                                       >  1:355898/1‑117 (MQ=255)

                                                                                          cccTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATg                                                                                      <  4:584444/113‑1 (MQ=255)

                                                                                          cccTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATg                                                                                      >  3:584444/1‑113 (MQ=255)

                                                                                              ggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatCa                                                                                                                                             >  4:388716‑M1/53‑54 (MQ=255)

                                                                                              ggacactttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatCa                                                                                                                                             <  3:388716‑M1/2‑1 (MQ=255)

                                                                                              gATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAtttt                                                                              >  3:1084069/1‑117 (MQ=255)

                                                                                                    tGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTTATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTAt                                             <  4:1088615/144‑1 (MQ=255)

                                                                                                    tGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAgtgt                                                                  <  2:110980/123‑1 (MQ=255)

                                                                                                    tGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAATTGTCCAGTAGCGTGGTTCGGGTAt                                             >  3:1088615/1‑144 (MQ=255)

                                                                                                    tGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCggg                                                <  1:755582/141‑1 (MQ=255)

                                                                                                     ttgcgtgaaaatctgcatttgatcggtaccaagaaaggttgcgatCACgg                                                                                                                                          <  2:17563‑M1/5‑1 (MQ=255)

                                                                                                           gaaaatctgcatttgatcggtaccaagaaaggttgcgagCACGGTACAGGCTCCGCACTGTc                                                                                                                        >  3:446636‑M1/40‑62 (MQ=255)

                                                                                                           gaaaatctgcatttgatcggtaccaagaaaggttgcgagCACGGTACAGGCTCCGCACTGTc                                                                                                                        <  4:446636‑M1/23‑1 (MQ=255)

                                                                                                            aGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAg                                                                     >  3:1141115/1‑112 (MQ=255)

                                                                                                            aGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAg                                                                     <  4:1141115/112‑1 (MQ=255)

                                                                                                                     caggctTAATGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCaa                                                                       >  2:837640/1‑101 (MQ=255)

                                                                                                                     caggctTAATGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCaa                                                                       <  1:837640/101‑1 (MQ=255)

                                                                                                                     caggcaTTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAgtgt                                                                  >  1:469948/1‑106 (MQ=255)

                                                                                                                     atttgatcggtaccaagaaaggttgcgatCACGGTACAGGCTCCGCACTGTc                                                                                                                        <  2:569791‑M1/23‑1 (MQ=255)

                                                                                                                       ggcaTTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCgg                                                 <  1:6220/121‑1 (MQ=255)

                                                                                                                        gcaTTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAgtgt                                                                  <  2:149144/103‑1 (MQ=255)

                                                                                                                        gcaTTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAgtgt                                                                  >  1:149144/1‑103 (MQ=255)

                                                                                                                            tAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCtt                                                                                                     <  3:355147/64‑1 (MQ=255)

                                                                                                                            tAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAgctgct                              >  1:1105319/1‑135 (MQ=255)

                                                                                                                            tAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAgctgct                              <  2:1105319/135‑1 (MQ=255)

                                                                                                                                ccTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCggg                                                <  1:401910/113‑1 (MQ=255)

                                                                                                                                ccTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCggg                                                >  2:401910/1‑113 (MQ=255)

                                                                                                                                  tGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTg                                                                                                    <  4:671540/59‑1 (MQ=255)

                                                                                                                                   gCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTc          <  3:783983/148‑1 (MQ=255)

                                                                                                                                    cGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCg                                                  <  4:178869/107‑1 (MQ=255)

                                                                                                                                    cGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCg                                                  >  3:178869/1‑107 (MQ=255)

                                                                                                                                     gACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTa                                              <  1:1014587/110‑1 (MQ=255)

                                                                                                                                         aTTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTc    <  2:851522/148‑1 (MQ=255)

                                                                                                                                           tGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATGAAATGCAGAtttt                                                                              <  1:845639/72‑1 (MQ=255)

                                                                                                                                           tGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAtttt                                                                              >  2:845639/1‑72 (MQ=255)

                                                                                                                                           tGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAgtg      <  3:700496/144‑1 (MQ=255)

                                                                                                                                             aCCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGc                                                                                     >  3:217718/1‑63 (MQ=255)

                                                                                                                                              ccAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAg  <  1:140131/145‑1 (MQ=255)

                                                                                                                                               cAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGt                                               >  2:969695/1‑99 (MQ=255)

                                                                                                                                               cAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGCGt                                               <  1:969695/99‑1 (MQ=255)

                                                                                                                                                aGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAg        <  4:347387/137‑1 (MQ=255)

                                                                                                                                                 gCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGt                                                     <  4:1012330/91‑1 (MQ=255)

                                                                                                                                                 gCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGt                                                     >  3:1012330/1‑91 (MQ=255)

CACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAG  >  NC_000913/302101‑302387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.