BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	302247 =	96 (1.030)	6 (0.070)	5/190	NT	5.8%	coding (327/690 nt)	paoA	PaoABC aldehyde oxidoreductase, 2Fe‑2S subunit
*	?	NC_000913	302274 =	102 (1.150)	6 (0.070)	5/190	NT	5.8%	coding (300/690 nt)	paoA	PaoABC aldehyde oxidoreductase, 2Fe‑2S subunit

Only 100 of 137 total aligned reads displayed.

GCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAGGGGCATTATCTCTGGCGCGGGTGTAGCTGCCGGA  >  NC_000913/302128‑302421

gccgccTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGAt                                                                                                                                                    <  4:140455/148‑1 (MQ=255)

     cTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCaa                                                                                                                                               >  1:407381/1‑148 (MQ=255)

                 aaGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCa                                                                                                                                                <  1:1016860/135‑1 (MQ=255)

                 aaGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCa                                                                                                                                                >  2:1016860/1‑135 (MQ=255)

                    aTTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGa                                                                                                                                                     <  4:150207/127‑1 (MQ=255)

                    aTTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGa                                                                                                                                                     >  3:150207/1‑127 (MQ=255)

                      tATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTg                                                                                                                                      <  4:54421/140‑1 (MQ=255)

                      tATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTg                                                                                                                                      >  3:54421/1‑140 (MQ=255)

                            gCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATg                                                                                                                        <  2:910321/148‑1 (MQ=255)

                             caaccccAGCCCTCCAAAGGTGGTCATCTCGGCCCCCTGAAGCAAGCCTCAAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGCCTAGCACGGTACAGGCACTGCACTGTCCGAGATCGAAACCTTTCTTGGTACCGATCAAATGc                                                                                                                       <  4:220278/144‑1 (MQ=255)

                                   cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGt                                                                                                                                    <  3:1040499/129‑1 (MQ=255)

                                   cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGt                                                                                                                                    >  4:1040499/1‑129 (MQ=255)

                                   cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGc                                                                                                                       >  2:459090/1‑142 (MQ=255)

                                   cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGc                                                                                                                       <  1:459090/142‑1 (MQ=255)

                                   cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAttt                                                                                                                 >  4:783983/1‑148 (MQ=255)

                                   cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAttt                                                                                                                 >  1:753953/1‑148 (MQ=255)

                                   cAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAttt                                                                                                                 >  3:194427/1‑148 (MQ=255)

                                     ggCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCATGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCt                                                                                                                                        >  1:894143/1‑123 (MQ=255)

                                     ggCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCt                                                                                                                                        <  1:587745/123‑1 (MQ=255)

                                      gCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCa                                                                                                              <  2:407381/148‑1 (MQ=255)

                                         ttCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAAcc                                                                                                                                             >  3:171160/1‑114 (MQ=255)

                                          tCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCaa                                                                                                                           <  1:373426/131‑1 (MQ=255)

                                             aTGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGAt                                                                                                                              >  4:112298/1‑125 (MQ=255)

                                               ggtggtGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCaaa                                                                                                                          <  3:216518/127‑1 (MQ=255)

                                               ggtggtGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCaaa                                                                                                                          >  4:216518/1‑127 (MQ=255)

                                                 tggtgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTc                                                                                                   <  2:753953/148‑1 (MQ=255)

                                                  ggtgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAt                                                                                                                   >  4:578428/1‑131 (MQ=255)

                                                  ggtgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAt                                                                                                                   <  3:578428/131‑1 (MQ=255)

                                                    tgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCa                                                                                                                                                <  1:705703/100‑1 (MQ=255)

                                                    tgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCa                                                                                                                                                >  2:705703/1‑100 (MQ=255)

                                                    tgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTg                                                                                                                                      >  3:397416/1‑110 (MQ=255)

                                                    tgATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTg                                                                                                                                      <  4:397416/110‑1 (MQ=255)

                                                      aTCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGAt                                                                                                                                                    >  1:510109/1‑94 (MQ=255)

                                                      aTCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGAt                                                                                                                                                    <  2:510109/94‑1 (MQ=255)

                                                         tcGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCg                                                                                           <  4:194427/148‑1 (MQ=255)

                                                          cGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAAt                                                                                                                         >  1:355898/1‑117 (MQ=255)

                                                          cGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAAt                                                                                                                         <  2:355898/117‑1 (MQ=255)

                                                               cccTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATg                                                                                                                        >  3:584444/1‑113 (MQ=255)

                                                                   gATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAtttt                                                                                                                >  3:1084069/1‑117 (MQ=255)

                                                                   gATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAtttt                                                                                                                <  4:1084069/117‑1 (MQ=255)

                                                                         tGACTGGAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACAAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCACATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCggg                                                                                  >  2:755582/1‑141 (MQ=255)

                                                                         tGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTTATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTAt                                                                               <  4:1088615/144‑1 (MQ=255)

                                                                         tGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAATTGTCCAGTAGCGTGGTTCGGGTAt                                                                               >  3:1088615/1‑144 (MQ=255)

                                                                         tGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCggg                                                                                  <  1:755582/141‑1 (MQ=255)

                                                                                 aGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAg                                                                                                       >  3:1141115/1‑112 (MQ=255)

                                                                                        ggcaggcaTTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCg                                                                                    <  3:906845/124‑1 (MQ=255)

                                                                                          caggctTAATGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCaa                                                                                                         <  1:837640/101‑1 (MQ=255)

                                                                                          caggcaTTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAgtgt                                                                                                    >  1:469948/1‑106 (MQ=255)

                                                                                            ggcaTTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCgg                                                                                   >  2:6220/1‑121 (MQ=255)

                                                                                             gcaTTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAgtgt                                                                                                    >  1:149144/1‑103 (MQ=255)

                                                                                             gcaTTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAgtgt                                                                                                    <  2:149144/103‑1 (MQ=255)

                                                                                              caTTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGcc                                                      >  1:851522/1‑148 (MQ=255)

                                                                                                 tAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCtt                                                                                                                                       <  3:355147/64‑1 (MQ=255)

                                                                                                 tAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCtt                                                                                                                                       >  4:355147/1‑64 (MQ=255)

                                                                                                 tAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAgctgct                                                                <  2:1105319/135‑1 (MQ=255)

                                                                                                 tAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAgctgct                                                                >  1:1105319/1‑135 (MQ=255)

                                                                                                     ccTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCggg                                                                                  >  2:401910/1‑113 (MQ=255)

                                                                                                       tGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTg                                                                                                                                      >  3:671540/1‑59 (MQ=255)

                                                                                                       tGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTg                                                                                                                                      <  4:671540/59‑1 (MQ=255)

                                                                                                        gCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTc                                            <  3:783983/148‑1 (MQ=255)

                                                                                                         cGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCg                                                                                    <  4:178869/107‑1 (MQ=255)

                                                                                                          gACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTa                                                                                >  2:1014587/1‑110 (MQ=255)

                                                                                                          gACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTa                                                                                <  1:1014587/110‑1 (MQ=255)

                                                                                                              aTTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTc                                      <  2:851522/148‑1 (MQ=255)

                                                                                                                tGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAtttt                                                                                                                >  2:845639/1‑72 (MQ=255)

                                                                                                                tGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCGAGTAGCGTCGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAgtg                                        >  4:700496/1‑144 (MQ=255)

                                                                                                                tGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAgtg                                        <  3:700496/144‑1 (MQ=255)

                                                                                                                  aCCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGc                                                                                                                       >  3:217718/1‑63 (MQ=255)

                                                                                                                   ccAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAg                                    >  2:140131/1‑145 (MQ=255)

                                                                                                                   ccAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAg                                    <  1:140131/145‑1 (MQ=255)

                                                                                                                    cAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGt                                                                                 >  2:969695/1‑99 (MQ=255)

                                                                                                                     aGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAg                                          >  3:347387/1‑137 (MQ=255)

                                                                                                                     aGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAg                                          <  4:347387/137‑1 (MQ=255)

                                                                                                                        ACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTc                                                                                                   <  3:1073573‑M1/77‑1 (MQ=255)

                                                                                                                        ACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTc                                                                                                   >  4:1073573‑M1/1‑77 (MQ=255)

                                                                                                                         cggacagtgcggagcctgtaccgtgATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTAt                                                                               <  4:447562‑M2/71‑1 (MQ=255)

                                                                                                                         CGGTACAGGTTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGtttt                                                         >  3:1049919‑M1/1‑118 (MQ=255)

                                                                                                                         CGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGtttt                                                         <  4:1049919‑M1/118‑1 (MQ=255)

                                                                                                                           gacagtgcggagcctgtaccgtgCTCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTc                                                                                                               >  3:446636‑M2/24‑62 (MQ=255)

                                                                                                                           gacagtgcggagcctgtaccgtgATCGCAACCTTTCTTGGTACCGATCAAAt                                                                                                                         >  1:569791‑M2/24‑52 (MQ=255)

                                                                                                                           gacagtgcggagcctgtaccgtgATCGCAACCTTTCTTGGTACCGATCAAAt                                                                                                                         <  2:569791‑M2/29‑1 (MQ=255)

                                                                                                                             aCAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAGGGGCATTATctct                       >  2:898902/1‑148 (MQ=255)

                                                                                                                               aGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCa                                                                       >  2:880471/1‑98 (MQ=255)

                                                                                                                               aGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCa                                                                       <  1:880471/98‑1 (MQ=255)

                                                                                                                                 gCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGa                                                                                                                               >  1:460423/1‑40 (MQ=255)

                                                                                                                                 gCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGa                                                                                                                               <  2:460423/40‑1 (MQ=255)

                                                                                                                                             ccgtgATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCaa                                                                                                         <  2:17563‑M2/45‑1 (MQ=255)

                                                                                                                                             ccgtgATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCaa                                                                                                         >  1:17563‑M2/6‑50 (MQ=255)

                                                                                                                                             ccgtgATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAgctg                                                                  >  2:157365‑M2/6‑89 (MQ=255)

                                                                                                                                             ccgtgATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAGGGGCATTATctct                       <  4:59642‑M2/127‑1 (MQ=255)

                                                                                                                                                tgATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTcc                                                                                                  >  4:388716‑M2/3‑54 (MQ=255)

                                                                                                                                                tgATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTcc                                                                                                  <  3:388716‑M2/52‑1 (MQ=255)

                                                                                                                                                tgATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCg                                                                                    >  4:839246‑M2/3‑68 (MQ=255)

                                                                                                                                                tgATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCg                                                                                    <  3:839246‑M2/66‑1 (MQ=255)

                                                                                                                                                tgATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAGGGGCATTATCTCTGGCGCGGGTGTAGCTGCCg    >  1:149482‑M2/3‑148 (MQ=255)

                                                                                                                                                 gATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAGGGGCATTATCTCTGgcgc                  >  2:652463‑M2/2‑133 (MQ=255)

                                                                                                                                                 gATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAGGGGCATTATCTCTGgcgc                  <  1:652463‑M2/132‑1 (MQ=255)

                                                                                                                                                  aTCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAGGGGCATTAtctc                        <  2:50597/126‑1 (MQ=255)

                                                                                                                                                  aTCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAGGGGCATTATCTCTGGcgcg                 >  2:408064/1‑133 (MQ=255)

                                                                                                                                                  aTCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAGGGGCATTATCTCTGGcgcg                 <  1:408064/133‑1 (MQ=255)

GCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAATGGTGGTGATCTCGGCCCCCTGATGCATGACTGCAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTCAGGGGCATTATCTCTGGCGCGGGTGTAGCTGCCGGA  >  NC_000913/302128‑302421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.