BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2949337	88 (0.940)	11 (0.130)	7/184	NT	11.1%	coding (96/1332 nt)	argA	amino acid N‑acetyltransferase and inactive acetylglutamate kinase
*	?	NC_000913	= 2949352	95 (1.110)	11 (0.130)	7/184	NT	11.1%	coding (111/1332 nt)	argA	amino acid N‑acetyltransferase and inactive acetylglutamate kinase

Only 100 of 128 total aligned reads displayed.

ACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGC  >  NC_000913/2949193‑2949482

aCAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCaat                                                                                                                                                >  1:899035‑M1/1‑145 (MQ=255)

          aaTACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCa                                                                                                                                      >  1:618862/1‑148 (MQ=255)

                     ttCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCaatggcttcaccgccgagcatgat                                                                                                                           <  1:540367‑M1/148‑25 (MQ=255)

                     ttCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGaa                                                                                                                                          <  2:968891/133‑1 (MQ=255)

                          ataatCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCaatggcttcaccgccgagcatga                                                                                                                            <  1:1052235‑M1/142‑24 (MQ=255)

                          ataatCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTgagcatg                                                                                                                             <  3:240483‑M2/141‑8 (MQ=255)

                          ataatCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTgagcatg                                                                                                                             >  4:240483‑M2/1‑134 (MQ=255)

                                             tgCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAAtt                                                                                                                       >  4:824539/1‑128 (MQ=255)

                                             tgCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAAtt                                                                                                                       <  3:347418/128‑1 (MQ=255)

                                             tgCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAAtt                                                                                                                       <  3:824539/128‑1 (MQ=255)

                                             tgCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAAtt                                                                                                                       >  4:347418/1‑128 (MQ=255)

                                               ccGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGatat                                                                                                 >  1:434135/1‑148 (MQ=255)

                                                   ggTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg                                                                                             <  2:434135/148‑1 (MQ=255)

                                                   ggTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg                                                                                             >  3:532628/1‑148 (MQ=255)

                                                         ggAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGcc                                                                                                                                       >  3:6010/1‑100 (MQ=255)

                                                         ggAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGc                                                                                                                                        <  2:637330/99‑1 (MQ=255)

                                                         ggAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGc                                                                                                                                        >  1:637330/1‑99 (MQ=255)

                                                         ggAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtct                                                                                                                    >  1:1061466/1‑119 (MQ=255)

                                                         ggAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtct                                                                                                                    <  2:1061466/119‑1 (MQ=255)

                                                                aaaaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATg                                                                                                     >  4:457550/1‑127 (MQ=255)

                                                                  aaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTgagcat                                                                                                                              >  1:298618‑M2/1‑94 (MQ=255)

                                                                  aaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTgagcat                                                                                                                              <  2:298618‑M2/100‑7 (MQ=255)

                                                                  aaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtct                                                                                                                    >  4:1008217/1‑110 (MQ=255)

                                                                  aaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTc                                                                              <  3:918321/148‑1 (MQ=255)

                                                                   aCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg                                                                                             >  3:523824/1‑132 (MQ=255)

                                                                   aCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg                                                                                             <  4:523824/132‑1 (MQ=255)

                                                                    ccGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTaa                                                                                                       >  3:333229/1‑121 (MQ=255)

                                                                       aGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCAt                                                                                                                                     >  3:230880/1‑88 (MQ=255)

                                                                            gTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTc                                                                    <  2:1085748/148‑1 (MQ=255)

                                                                             tCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCaatggcttcaccgccgagcatga                                                                                                                            >  1:419581‑M1/1‑68 (MQ=255)

                                                                             tCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCaatggcttcaccgccgagcatga                                                                                                                            <  3:588380‑M1/91‑24 (MQ=255)

                                                                             tCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCaatggcttcaccgccgagcatga                                                                                                                            >  4:588380‑M1/1‑68 (MQ=255)

                                                                             tCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCaatggcttcaccgccgagcatga                                                                                                                            <  2:419581‑M1/91‑24 (MQ=255)

                                                                              cGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                                                                            <  3:226786/122‑1 (MQ=255)

                                                                              cGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                                                                            >  4:226786/1‑122 (MQ=255)

                                                                                 gggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggt                                                                <  4:1060222/147‑1 (MQ=255)

                                                                                 gggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggt                                                                >  3:1060222/1‑147 (MQ=255)

                                                                                  ggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTgagcatg                                                                                                                             <  1:889640‑M2/85‑8 (MQ=255)

                                                                                  ggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTgagcatg                                                                                                                             >  2:889640‑M2/1‑78 (MQ=255)

                                                                                  ggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtgg                                                              <  2:618862/148‑1 (MQ=255)

                                                                                     ttCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCg                                                                                               >  1:1016651/1‑112 (MQ=255)

                                                                                     ttCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCg                                                                                               <  2:1016651/112‑1 (MQ=255)

                                                                                     ttCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTACAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtggtgg                                                           >  4:165239/1‑148 (MQ=255)

                                                                                       ccGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCaatggcttcaccgccgagcatgatg                                                                                                                          <  3:1032035‑M1/83‑26 (MQ=255)

                                                                                          ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtggt                                                             <  4:1036375/141‑1 (MQ=255)

                                                                                          ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtggt                                                             >  3:1036375/1‑141 (MQ=255)

                                                                                              tCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa                                                                                                              >  4:1040398/1‑88 (MQ=255)

                                                                                                       tataTCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtg                                                                  <  3:125773/123‑1 (MQ=255)

                                                                                                       tataTCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtg                                                                  >  4:125773/1‑123 (MQ=255)

                                                                                                           tCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATc                                                                        >  3:1109382/1‑113 (MQ=255)

                                                                                                            cAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTAt                                                      <  4:306236/130‑1 (MQ=255)

                                                                                                              aTACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggt                                                                <  1:537537/118‑1 (MQ=255)

                                                                                                              aTACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggt                                                                >  2:537537/1‑118 (MQ=255)

                                                                                                                aCCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtgg                                                                 >  2:288828/1‑115 (MQ=255)

                                                                                                                           aaaaaCGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCt                                                        >  3:994561/1‑113 (MQ=255)

                                                                                                                              aaCGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATc                          <  4:192013/140‑1 (MQ=255)

                                                                                                                              aaCGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTgcg                  >  2:951791/1‑148 (MQ=255)

                                                                                                                               aCGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAAt                           >  1:1027816/1‑138 (MQ=255)

                                                                                                                               aCGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAAt                           <  2:1027816/138‑1 (MQ=255)

                                                                                                                                cGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTc                                                         >  3:990448/1‑107 (MQ=255)

                                                                                                                                cGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCa                <  4:948199/148‑1 (MQ=255)

                                                                                                                                cGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTCGTGGTGGTc                                                         <  4:990448/107‑1 (MQ=255)

                                                                                                                                  tttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCt                                                                               >  3:572963/1‑83 (MQ=255)

                                                                                                                                  tttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCt                                                                               <  4:572963/83‑1 (MQ=255)

                                                                                                                                   ttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAg                                                                                  <  3:435788/79‑1 (MQ=255)

                                                                                                                                   ttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAg                                                                                  >  4:435788/1‑79 (MQ=255)

                                                                                                                                   ttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCt                                                        >  3:648006/1‑105 (MQ=255)

                                                                                                                                   ttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCt                                                        <  4:648006/105‑1 (MQ=255)

                                                                                                                                   ttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATca             <  1:951791/148‑1 (MQ=255)

                                                                                                                                     gTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATcacc           <  3:165239/148‑1 (MQ=255)

                                                                                                                                      tcatcaTGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                                                                            <  1:525043/66‑1 (MQ=255)

                                                                                                                                      tcatcaTGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                                                                            >  4:939120/1‑66 (MQ=255)

                                                                                                                                      tcatcaTGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                                                                            >  2:525043/1‑66 (MQ=255)

                                                                                                                                      tcatcaTGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                                                                            <  3:939120/66‑1 (MQ=255)

                                                                                                                                       catcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcgg                                                                          >  4:1032035‑M2/1‑25 (MQ=255)

                                                                                                                                       catcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcgg                                                                          <  3:1032035‑M2/83‑59 (MQ=255)

                                                                                                                                       catcatGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGAGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATcaccac         >  4:779320/1‑148 (MQ=255)

                                                                                                                                        atcatGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTg                        <  1:999513/132‑1 (MQ=255)

                                                                                                                                        atcatGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTg                        >  2:999513/1‑132 (MQ=255)

                                                                                                                                         tcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggttttacgttcctttaccacggcacacctctttgcatgattattcgaaa       <  2:899035‑M2/148‑126 (MQ=255)

                                                                                                                                         tcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggttttacgttcctttaccacggcacacctctttgcatgattat             >  2:1052235‑M2/1‑23 (MQ=255)

                                                                                                                                         tcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcga                                                                >  4:588380‑M2/1‑23 (MQ=255)

                                                                                                                                         tcatGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGa       >  1:234803/1‑148 (MQ=255)

                                                                                                                                          catGCTCaatggcttcaccgccgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggttttacgttcctttaccacggcacacctctttgcatgattat             >  4:240483‑M1/1‑7 (MQ=255)

                                                                                                                                          catGCTCaatggcttcaccgccgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggttttacgttcctttaccacggcacacctctttgcatgattat             <  3:240483‑M1/141‑135 (MQ=255)

                                                                                                                                          catGCTCaatggcttcaccgccgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatcc                                                                     <  1:889640‑M1/85‑79 (MQ=255)

                                                                                                                                          catGCTCaatggcttcaccgccgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatcc                                                                     >  2:889640‑M1/1‑7 (MQ=255)

                                                                                                                                          catGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtgg                                                              >  1:113825/1‑92 (MQ=255)

                                                                                                                                          catGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtgg                                                              <  2:113825/92‑1 (MQ=255)

                                                                                                                                          catGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATg                                                     <  1:24275/101‑1 (MQ=255)

                                                                                                                                          catGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATcacc           <  1:586339/143‑1 (MQ=255)

                                                                                                                                          catGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATcacc           >  2:586339/1‑143 (MQ=255)

                                                                                                                                          catGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGaa      >  3:87952/1‑148 (MQ=255)

                                                                                                                                           atGCTCaatggcttcaccgccgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggtt                                                     >  1:298618‑M1/1‑6 (MQ=255)

                                                                                                                                           atGCTCaatggcttcaccgccgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggtt                                                     <  2:298618‑M1/100‑95 (MQ=255)

                                                                                                                                             gCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggttttacgttcctttaccacggcacacctctttgcatgattattcgaaattag   >  2:540367‑M2/1‑19 (MQ=255)

                                                                                                                                              cTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATg                                                     <  2:759682/97‑1 (MQ=255)

                                                                                                                                              cTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGc  >  1:1013823/1‑148 (MQ=255)

                                                                                                                                                cggcggTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTgcg                  >  3:61367/1‑130 (MQ=255)

                                                                                                                                                cggcggTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTgcg                  <  4:61367/130‑1 (MQ=255)

ACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGC  >  NC_000913/2949193‑2949482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.