BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2949337	88 (0.940)	11 (0.130)	7/184	NT	11.1%	coding (96/1332 nt)	argA	amino acid N‑acetyltransferase and inactive acetylglutamate kinase
*	?	NC_000913	= 2949352	95 (1.110)	11 (0.130)	7/184	NT	11.1%	coding (111/1332 nt)	argA	amino acid N‑acetyltransferase and inactive acetylglutamate kinase

Only 100 of 123 total aligned reads displayed.

ATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGCTGTATCACAAGAATA  >  NC_000913/2949219‑2949497

ataatCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTgagcatg                                                                                                                                            <  3:240483‑M2/141‑8 (MQ=255)

                   tgCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAAtt                                                                                                                                      <  3:824539/128‑1 (MQ=255)

                   tgCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAAtt                                                                                                                                      >  4:824539/1‑128 (MQ=255)

                   tgCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAAtt                                                                                                                                      >  4:347418/1‑128 (MQ=255)

                     ccGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGatat                                                                                                                >  1:434135/1‑148 (MQ=255)

                         ggTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg                                                                                                            <  2:434135/148‑1 (MQ=255)

                            aaaGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgttg                                                                                                         <  4:532628/148‑1 (MQ=255)

                             aaGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgttgt                                                                                                        >  4:918321/1‑148 (MQ=255)

                               ggAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtct                                                                                                                                   <  2:1061466/119‑1 (MQ=255)

                               ggAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtct                                                                                                                                   >  1:1061466/1‑119 (MQ=255)

                                      aaaaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATg                                                                                                                    <  3:457550/127‑1 (MQ=255)

                                      aaaaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATg                                                                                                                    >  4:457550/1‑127 (MQ=255)

                                        aaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtct                                                                                                                                   <  3:1008217/110‑1 (MQ=255)

                                        aaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTc                                                                                             <  3:918321/148‑1 (MQ=255)

                                         aCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg                                                                                                            <  4:523824/132‑1 (MQ=255)

                                         aCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg                                                                                                            >  3:523824/1‑132 (MQ=255)

                                          ccGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTaa                                                                                                                      <  4:333229/121‑1 (MQ=255)

                                          ccGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTaa                                                                                                                      >  3:333229/1‑121 (MQ=255)

                                                  gTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTc                                                                                   <  2:1085748/148‑1 (MQ=255)

                                                    cGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                                                                                           >  4:226786/1‑122 (MQ=255)

                                                    cGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                                                                                           <  3:226786/122‑1 (MQ=255)

                                                       gggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggt                                                                               <  4:1060222/147‑1 (MQ=255)

                                                        ggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTgagcatg                                                                                                                                            <  1:889640‑M2/85‑8 (MQ=255)

                                                        ggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTgagcatg                                                                                                                                            >  2:889640‑M2/1‑78 (MQ=255)

                                                        ggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtgg                                                                             <  2:618862/148‑1 (MQ=255)

                                                           ttCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCg                                                                                                              >  1:1016651/1‑112 (MQ=255)

                                                           ttCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCg                                                                                                              <  2:1016651/112‑1 (MQ=255)

                                                           ttCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTACAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtggtgg                                                                          >  4:165239/1‑148 (MQ=255)

                                                                ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtggt                                                                            >  3:1036375/1‑141 (MQ=255)

                                                                ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtggt                                                                            <  4:1036375/141‑1 (MQ=255)

                                                                    tCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa                                                                                                                             <  3:1040398/88‑1 (MQ=255)

                                                                    tCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa                                                                                                                             >  4:1040398/1‑88 (MQ=255)

                                                                        ttCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACg                                                             >  3:948199/1‑148 (MQ=255)

                                                                             tataTCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtg                                                                                 <  3:125773/123‑1 (MQ=255)

                                                                                 tCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATc                                                                                       >  3:1109382/1‑113 (MQ=255)

                                                                                 tCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATc                                                                                       <  4:1109382/113‑1 (MQ=255)

                                                                                  cAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCCCAGCCTCGGCATCCGTCTGGTGGTGGTCTAt                                                                     >  3:306236/1‑130 (MQ=255)

                                                                                  cAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTAt                                                                     <  4:306236/130‑1 (MQ=255)

                                                                                      aCCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtgg                                                                                <  1:288828/115‑1 (MQ=255)

                                                                                      aCCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtgg                                                                                >  2:288828/1‑115 (MQ=255)

                                                                                          aCCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCaaa                                           >  2:712880/1‑148 (MQ=255)

                                                                                                 aaaaaCGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCt                                                                       >  3:994561/1‑113 (MQ=255)

                                                                                                    aaCGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATc                                         <  4:192013/140‑1 (MQ=255)

                                                                                                    aaCGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATc                                         >  3:192013/1‑140 (MQ=255)

                                                                                                    aaCGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTgcg                                 >  2:951791/1‑148 (MQ=255)

                                                                                                     aCGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAAt                                          >  1:1027816/1‑138 (MQ=255)

                                                                                                     aCGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAAt                                          <  2:1027816/138‑1 (MQ=255)

                                                                                                      cGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTc                                                                        >  3:990448/1‑107 (MQ=255)

                                                                                                      cGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCa                               <  4:948199/148‑1 (MQ=255)

                                                                                                      cGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTCGTGGTGGTc                                                                        <  4:990448/107‑1 (MQ=255)

                                                                                                        tttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCt                                                                                              >  3:572963/1‑83 (MQ=255)

                                                                                                        tttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCt                                                                                              <  4:572963/83‑1 (MQ=255)

                                                                                                         ttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAg                                                                                                 <  3:435788/79‑1 (MQ=255)

                                                                                                         ttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCt                                                                       >  3:648006/1‑105 (MQ=255)

                                                                                                         ttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCt                                                                       <  4:648006/105‑1 (MQ=255)

                                                                                                         ttGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATca                            <  1:951791/148‑1 (MQ=255)

                                                                                                           gTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATcacc                          <  3:165239/148‑1 (MQ=255)

                                                                                                            tcatcaTGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                                                                                           <  1:525043/66‑1 (MQ=255)

                                                                                                            tcatcaTGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                                                                                           >  4:939120/1‑66 (MQ=255)

                                                                                                            tcatcaTGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                                                                                           >  2:525043/1‑66 (MQ=255)

                                                                                                             catcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcgg                                                                                         >  4:1032035‑M2/1‑25 (MQ=255)

                                                                                                             catcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcgg                                                                                         <  3:1032035‑M2/83‑59 (MQ=255)

                                                                                                             catcatGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGAGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATcaccac                        >  4:779320/1‑148 (MQ=255)

                                                                                                              atcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggttttacgttcctttaccacggcacacctctttgcatgattattcgaa                       <  1:540367‑M2/148‑125 (MQ=255)

                                                                                                              atcatGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTg                                       >  2:999513/1‑132 (MQ=255)

                                                                                                               tcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggttttacgttcctttaccacggcacacctctttgcatgattattcgaaa                      <  2:899035‑M2/148‑126 (MQ=255)

                                                                                                               tcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggttttacgttcctttaccacggcacacctctttgcatgattat                            <  1:1052235‑M2/142‑120 (MQ=255)

                                                                                                               tcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggttttacgttcctttaccacggcacacctctttgcatgattat                            >  2:1052235‑M2/1‑23 (MQ=255)

                                                                                                               tcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcga                                                                               <  2:419581‑M2/91‑69 (MQ=255)

                                                                                                               tcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcga                                                                               >  4:588380‑M2/1‑23 (MQ=255)

                                                                                                               tcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcga                                                                               >  1:419581‑M2/1‑23 (MQ=255)

                                                                                                               tcatGCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcga                                                                               <  3:588380‑M2/91‑69 (MQ=255)

                                                                                                               tcatGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGa                      >  1:234803/1‑148 (MQ=255)

                                                                                                                catGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATg                                                                    >  2:24275/1‑101 (MQ=255)

                                                                                                                catGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATg                                                                    <  1:24275/101‑1 (MQ=255)

                                                                                                                catGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATcacc                          >  2:586339/1‑143 (MQ=255)

                                                                                                                catGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATcacc                          <  1:586339/143‑1 (MQ=255)

                                                                                                                catGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGaa                     >  3:87952/1‑148 (MQ=255)

                                                                                                                   gCTCGGCGGTGAAGCCATTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggttttacgttcctttaccacggcacacctctttgcatgattattcgaaattag                  >  2:540367‑M2/1‑19 (MQ=255)

                                                                                                                    cTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGc                 >  1:1013823/1‑148 (MQ=255)

                                                                                                                      cggcggTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTgcg                                 >  3:61367/1‑130 (MQ=255)

                                                                                                                        gcggTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGCTGTa             >  3:516264/1‑148 (MQ=255)

                                                                                                                        gcggTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGCTGTa             <  1:712880/148‑1 (MQ=255)

                                                                                                                          ggTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtgg                                                                             >  4:230307/1‑82 (MQ=255)

                                                                                                                            tGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGa                                                 <  4:261778/108‑1 (MQ=255)

                                                                                                                            tGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGa                                                 >  3:261778/1‑108 (MQ=255)

                                                                                                                              aaGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCaaa                                           >  1:36433/1‑112 (MQ=255)

                                                                                                                              aaGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCaaa                                           <  2:36433/112‑1 (MQ=255)

                                                                                                                               aGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGCTGTATCACAAg      >  1:405097/1‑148 (MQ=255)

                                                                                                                                gCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTc                                                                                   >  3:887096/1‑70 (MQ=255)

                                                                                                                                gCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGc                 >  1:668467/1‑136 (MQ=255)

                                                                                                                                gCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGc                 <  2:668467/136‑1 (MQ=255)

                                                                                                                                gCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGCTGt              <  2:201973/139‑1 (MQ=255)

                                                                                                                                gCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGCTGt              >  1:201973/1‑139 (MQ=255)

                                                                                                                                 ccATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGCTGTATCACAAGaa    >  1:988424/1‑148 (MQ=255)

                                                                                                                                  cATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGCTGTATCACAAGAat   <  2:234803/148‑1 (MQ=255)

                                                                                                                                   aTTgagcatgatgacaaacgtttttccccggtgggtattgatatagggaaccgaatggcggaatccctcgaccaactcggttttacgttcctttaccacggcacacctctttgcatgattattcgaaattagtgtatttttattctgt  >  1:899035‑M2/1‑3 (MQ=255)

                                                                                                                                    ttGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCAt                                                                                        <  3:686424/61‑1 (MQ=255)

                                                                                                                                    ttGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCAt                                                                                        >  4:686424/1‑61 (MQ=255)

                                                                                                                                    ttGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATca                            <  4:1007911/121‑1 (MQ=255)

ATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGCTGTATCACAAGAATA  >  NC_000913/2949219‑2949497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.