BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3836447	315 (3.370)	20 (0.230)	15/188	NT	5.9%	pseudogene (23/132 nt)	yicT	pseudogene
*	?	NC_000913	= 3836459	340 (3.870)	20 (0.230)	15/188	NT	5.9%	pseudogene (35/132 nt)	yicT	pseudogene

Only 100 of 471 total aligned reads displayed.

CCTGTGATCTTCCGCCAAAATGCCTCTCCTGACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTAAGGTGAAGATGTTGTTTTACTCGCCC  >  NC_000913/3836300‑3836591

         ttCCGCCAAAATGCCTCTCCTGACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGt                                                                                                                                         <  3:809951/148‑1 (MQ=255)

          tCCGCCAAAATGCCTCTCCTGACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAAt                                                                                                                                                 <  4:101638/139‑1 (MQ=255)

          tCCGCCAAAATGCCTCTCCTGACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAAt                                                                                                                                                 >  3:101638/1‑139 (MQ=255)

          tCCGCCAAAATGCCTCTCCTGACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAA                                                                                                                                                  >  3:675804‑M1/1‑138 (MQ=255)

                       ctctCCTGACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGttctt                                                                                                                                 <  4:116371‑M2/142‑6 (MQ=255)

                       ctctCCTGACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGttctt                                                                                                                                 >  3:116371‑M2/1‑137 (MQ=255)

                       ctctCCTGACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTcc                                                                                                                           <  1:227353/148‑1 (MQ=255)

                           ccTGACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGa                                                                                                                       >  4:205909/1‑148 (MQ=255)

                             tGACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAAc                                                                                                                     >  1:1008827/1‑148 (MQ=255)

                              gACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGtt                                                                                                                                    <  2:7772‑M2/132‑3 (MQ=255)

                              gACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTg                                                                                                                              <  2:684318/138‑1 (MQ=255)

                                  ttCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGttct                                                                                                                                  <  4:175995‑M2/130‑5 (MQ=255)

                                       cAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCt                                                                                                                          >  2:452510/1‑133 (MQ=255)

                                         aCCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGata                                                                                                         >  1:1025411/1‑148 (MQ=255)

                                             cTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGATGAATCCGCCTGt                                                                                                                                         >  3:943232/1‑112 (MQ=255)

                                              ttGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATAtt                                                                                                       <  3:262325/145‑1 (MQ=255)

                                              ttGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGGTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATAtt                                                                                                       >  4:262325/1‑145 (MQ=255)

                                                   aTACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGttct                                                                                                                                  <  4:95133‑M2/113‑5 (MQ=255)

                                                        gTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGa                                                                                                           <  2:197282/131‑1 (MQ=255)

                                                         tCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCg                                                                                                                                       <  2:830772/102‑1 (MQ=255)

                                                         tCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAA                                                                                                                                                  >  1:922888‑M1/1‑91 (MQ=255)

                                                          cAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGttct                                                                                                                                  <  2:411977‑M2/106‑5 (MQ=255)

                                                          cAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATgcgc                                                                                        <  1:190444/148‑1 (MQ=255)

                                                             tCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAAccgacaggcggattctt                                                                                                                                 >  4:131084‑M1/1‑87 (MQ=255)

                                                             tCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAAccgacaggcggattctt                                                                                                                                 <  3:131084‑M1/104‑18 (MQ=255)

                                                               cAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCgtgt                                                                                   >  1:888248/1‑148 (MQ=255)

                                                                aGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGtt                                                                                  >  4:53520/1‑148 (MQ=255)

                                                                 gATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCg                                                                                                                                              <  4:89274/87‑1 (MQ=255)

                                                                      tttCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCa                                                                                                >  4:427097/1‑128 (MQ=255)

                                                                      tttCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCa                                                                                                <  3:427097/128‑1 (MQ=255)

                                                                        tCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAAccgacaggcggattct                                                                                                                                  <  3:466551‑M1/92‑17 (MQ=255)

                                                                        tCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCgtgt                                                                                   >  4:800666/1‑139 (MQ=255)

                                                                         cTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAg                                                                         <  1:60098/148‑1 (MQ=255)

                                                                           aCTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGt                                                                                                                             >  1:665358/1‑94 (MQ=255)

                                                                            cTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGtt                                                                                  >  3:848838/1‑136 (MQ=255)

                                                                              gCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGttct                                                                                                                                  <  1:435635‑M2/86‑5 (MQ=255)

                                                                                tCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGAttt                                                                  >  1:48783/1‑148 (MQ=255)

                                                                                 cAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTg                                                                 >  4:491127/1‑148 (MQ=255)

                                                                                  aaTATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCa                                                                                                <  2:340287/116‑1 (MQ=255)

                                                                                   atatTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGc                                                                           <  1:412788/136‑1 (MQ=255)

                                                                                   atatTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGcc                                                               >  1:817822/1‑148 (MQ=255)

                                                                                   atatTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCAGAAGAAccgacaggcggattcttcagc                                                                                                                             <  4:578176‑M1/86‑22 (MQ=255)

                                                                                     atTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGcc                                                                                                                                            <  2:130814/69‑1 (MQ=255)

                                                                                         aaTCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCctg                                                         <  3:585402/148‑1 (MQ=255)

                                                                                          aTCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAAccgacaggcggattc                                                                                                                                   <  2:93699‑M1/73‑16 (MQ=255)

                                                                                          aTCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCctgc                                                        >  4:1109030/1‑148 (MQ=255)

                                                                                           tCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCa                                                                                                <  2:2632/107‑1 (MQ=255)

                                                                                           tCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAgg                                                                        >  1:688778/1‑131 (MQ=255)

                                                                                           tCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCctgct                                                       >  2:921036/1‑148 (MQ=255)

                                                                                            cGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCa                                                                          <  1:394439/128‑1 (MQ=255)

                                                                                            cGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCctg                                                         <  2:1055859/145‑1 (MQ=255)

                                                                                              gCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGAc                                                    <  2:1016633/148‑1 (MQ=255)

                                                                                                 tCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGt                                                                                              <  2:661509/103‑1 (MQ=255)

                                                                                                  cAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACtctc                                                >  3:636858/1‑148 (MQ=255)

                                                                                                    ggAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTg                                                                            >  2:233982/1‑118 (MQ=255)

                                                                                                      aaTACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCg                                                                                      >  4:68464/1‑106 (MQ=255)

                                                                                                       aTACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGCCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCa                                           <  4:760704/148‑1 (MQ=255)

                                                                                                        tACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCaa                                          >  1:1079947/1‑148 (MQ=255)

                                                                                                         aCCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAgg                                                                        <  4:870848/117‑1 (MQ=255)

                                                                                                            tGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACg                                                                                                   >  4:640972/1‑87 (MQ=255)

                                                                                                             ggTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTa                                     >  2:728290/1‑148 (MQ=255)

                                                                                                               tCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGcc                                                                                                                                            <  1:324128/43‑1 (MQ=255)

                                                                                                                cTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTAt                                                                               >  3:1071767/1‑103 (MQ=255)

                                                                                                                cTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTAt                                                                               <  4:1071767/103‑1 (MQ=255)

                                                                                                                cTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCg                                  >  4:299134/1‑148 (MQ=255)

                                                                                                                  aaGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCa                                                                                                     >  2:586249/1‑79 (MQ=255)

                                                                                                                  aaGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTa                                                                                             <  1:254318/87‑1 (MQ=255)

                                                                                                                  aaGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGa                                                                     <  1:272771/111‑1 (MQ=255)

                                                                                                                   aGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATgcg                                                                                         <  1:75304/90‑1 (MQ=255)

                                                                                                                   aGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCgtg                                                                                    >  3:738401/1‑95 (MQ=255)

                                                                                                                    ggTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACtctc                                                >  3:952723/1‑130 (MQ=255)

                                                                                                                    ggTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCGGTCCTCGAACGCATCCGCGTTATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGCCTCTCAGCCAACTGTATCGCCAt                              <  3:1109030/148‑1 (MQ=255)

                                                                                                                       tttGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTaa                           <  1:994045/148‑1 (MQ=255)

                                                                                                                            gATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTAAGGTGa                      >  3:775133/1‑148 (MQ=255)

                                                                                                                            gATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTAAGGTGa                      <  3:299134/148‑1 (MQ=255)

                                                                                                                                gACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCg                                                                                      >  4:832747/1‑80 (MQ=255)

                                                                                                                                      gAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTAAGGTGAAGATgttgtt            <  3:205909/148‑1 (MQ=255)

                                                                                                                                       aGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTAAGGTGa                      <  4:913825/137‑1 (MQ=255)

                                                                                                                                         cGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTAAGGTGAAGAtgttg              <  3:49111/143‑1 (MQ=255)

                                                                                                                                             tGAAGAATCCGCCTGTCGGttcttcagccgctcatcgtccatcacaaaaccttagaccaggtattcctgaagccgattgaatattgagcagtagaaaatatctggattgacagtattacaaggg                             >  4:360088‑M2/1‑19 (MQ=255)

                                                                                                                                             tGAAGAATCCGCCTGTCGGttcttcagccgctcatcgtccatcacaaaaccttagaccaggtattcctgaagccgattgaatattgagcagtagaaaatatctggattgacagtattacaaggg                             <  3:360088‑M2/124‑106 (MQ=255)

                                                                                                                                              gaagaaTCCGCCTGTCGGttcttcagccgctcatcgtccatcacaaaaccttagaccaggtattcctg                                                                                    >  2:427181‑M2/1‑18 (MQ=255)

                                                                                                                                              gaagaaTCCGCCTGTCGGttcttcagccgctcatcgtccatcacaaaaccttagaccaggtattcctg                                                                                    >  2:87575‑M2/1‑18 (MQ=255)

                                                                                                                                              gaagaaTCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTAAGGTGAAGAtgttg              >  3:876478/1‑138 (MQ=255)

                                                                                                                                              gaagaaTCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTAAGGTGAAGATGTTGTTTTACTCg     >  1:549577/1‑147 (MQ=255)

                                                                                                                                               aagaaTCCGCCTGTCGGttcttcagccgctcatcgtccatcacaaaaccttagaccaggtattcctgaagccgattgaatattgagcagtagaaaatatctggattgacagtattacaa                                >  3:534007‑M2/1‑17 (MQ=255)

                                                                                                                                               aagaaTCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCctgc                                                        >  2:315482/1‑95 (MQ=255)

                                                                                                                                               aagaaTCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGAc                                                    <  2:185238/99‑1 (MQ=255)

                                                                                                                                               aagaaTCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTaa                           >  3:897207/1‑124 (MQ=255)

                                                                                                                                                agaaccgacaggcggattcttcagccgctcatcgtccatcacaaaaccttagaccaggtattcctgaagccgattgaatattgagcagtagaaaatatctggattgacagtattacaaggggttggagaa                    >  3:175995‑M1/1‑4 (MQ=255)

                                                                                                                                                agaaccgacaggcggattcttcagccgctcatcgtccatcacaaaaccttagacc                                                                                               >  1:356434‑M1/1‑4 (MQ=255)

                                                                                                                                                agaaTCCGCCTGTCGGttcttcagccgctcatcgtccatcacaaaaccttagaccaggtattcctgaagccgattgaatattgagcagtaga                                                          >  4:466551‑M2/1‑16 (MQ=255)

                                                                                                                                                agaaTCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCctg                                                         >  3:578081/1‑93 (MQ=255)

                                                                                                                                                 gaaTCCGCCTGTCGGttcttcagccgctcatcgtccatcacaaaaccttagacca                                                                                              >  2:540377‑M2/1‑15 (MQ=255)

                                                                                                                                                  aaccgacaggcggattcttcagccgctcatcgtccatcacaaaaccttagaccaggtattcctgaagccgattgaatattgagcagtagaaaata                                                     >  4:607437‑M1/1‑2 (MQ=255)

                                                                                                                                                  aaTCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCTGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTAAGGTGAAGAtgttgt             <  2:366809/135‑1 (MQ=255)

                                                                                                                                                  aaTCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGcc                                >  1:155907/1‑116 (MQ=255)

                                                                                                                                                   accgacaggcggattcttcagccgctcatcgtccatcacaaaaccttagaccaggtattcctgaagccgattgaatattgagcagtagaaaatatctggattgacagtattacaaggggttggagaacgtca               <  3:338551‑M1/132‑132 (MQ=255)

                                                                                                                                                   accgacaggcggattcttcagccgctcatcgtccatcacaaaaccttagaccaggtattcctgaagccgattgaatattgagcagtagaaaatatctggattgacagtattacaaggggttggagaacgtca               >  4:338551‑M1/1‑1 (MQ=255)

                                                                                                                                                   aTCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTAAGGTGa                      >  1:865563/1‑125 (MQ=255)

CCTGTGATCTTCCGCCAAAATGCCTCTCCTGACGTTCTCCAACCCCTTGTAATACTGTCAATCCAGATATTTTCTACTGCTCAATATTCAATCGGCTTCAGGAATACCTGGTCTAAGGTTTTGTGATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTATCGCCATTAAGGTGAAGATGTTGTTTTACTCGCCC  >  NC_000913/3836300‑3836591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.