BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	291960 =	139 (1.490)	9 (0.100)	6/184	NT	6.8%	pseudogene (557/828 nt)	yagJ	CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related
*	?	NC_000913	291982 =	119 (1.390)	9 (0.100)	6/184	NT	6.8%	pseudogene (579/828 nt)	yagJ	CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related

Only 100 of 170 total aligned reads displayed.

TCGAAACCAAACGTGAAGGATTTGCTTTCTGGTATCGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAGGCGAATCGAATCTGTCGCCGAAGTAAAGGGT  >  NC_000913/291843‑292123

tCGAAACCAAACGTGAAGGATTTGCTTTCTGGTATCGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAAt                                                                                                                                       >  1:912903/1‑148 (MQ=255)

   acaCCAAACGTGAAGGATTTGCTTTCTGGTATCGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATg                                                                                                                                      <  3:1145559/144‑1 (MQ=255)

           cGTGAAGGATTTGCTTTCTGGTATCGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGAcc                                                                                                                            <  3:1040021/148‑1 (MQ=255)

                cagaatgatgttcggcatatagcgcaagtccttccagtttgggcaaagcatcagccagatgtaggctatgtggatctaccaggtccacaaccattttgccaTCCTGTTCTTTGCCGAACAGGAt                                                                                                                                               >  1:22342‑M1/102‑124 (MQ=255)

                cagaatgatgttcggcatatagcgcaagtccttccagtttgggcaaagcatcagccagatgtaggctatgtggatctaccaggtccacaaccattttgccaTCCTGTTCTTTGCCGAACAGGAt                                                                                                                                               <  2:602155‑M1/23‑1 (MQ=255)

                cagaatgatgttcggcatatagcgcaagtccttccagtttgggcaaagcatcagccagatgtaggctatgtggatctaccaggtccacaaccattttgccaTCCTGTTCTTTGCCGAACAGGAt                                                                                                                                               >  1:602155‑M1/102‑124 (MQ=255)

                     ttGCTTTCTGGTATCGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATgg                                                                                                                                     >  3:528985/1‑129 (MQ=255)

                                tATCGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTAc                                                                                                       >  2:693712/1‑148 (MQ=255)

                                  tCGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGt                                                                                                                                    >  4:845763/1‑117 (MQ=255)

                                  tCGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGt                                                                                                                                    <  3:845763/117‑1 (MQ=255)

                                   cGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATc                                                                                                    >  3:496064/1‑148 (MQ=255)

                                        tCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCt                                                                                                         <  1:857079/138‑1 (MQ=255)

                                        tCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCt                                                                                                         >  2:857079/1‑138 (MQ=255)

                                         ccACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTtg                                                                                                                                  <  1:503085/112‑1 (MQ=255)

                                         ccACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTtg                                                                                                                                  >  2:503085/1‑112 (MQ=255)

                                         ccACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTg                                                                                              >  4:1085622/1‑148 (MQ=255)

                                         ccACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTACCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTg                                                                                              >  1:482785/1‑148 (MQ=255)

                                          cacaGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGTCAAAATGGt                                                                                                                                    >  3:942328/1‑109 (MQ=255)

                                           acaGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGAt                                                                                            >  2:631599/1‑148 (MQ=255)

                                              gTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCt                                                                                         >  3:825100/1‑148 (MQ=255)

                                               tACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCtt                                                                                        >  2:907730/1‑148 (MQ=255)

                                               tACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCtt                                                                                        <  1:907730/148‑1 (MQ=255)

                                               tACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCtt                                                                                        <  3:364493/148‑1 (MQ=255)

                                                   caGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGcc                                                                                    <  4:268283/148‑1 (MQ=255)

                                                      ggCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCaaaa                                                                                                                                        >  1:83427/1‑93 (MQ=255)

                                                        cAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGAcc                                                                                                                            <  4:514273/103‑1 (MQ=255)

                                                            cgtcACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGa                                                                           <  4:325123/148‑1 (MQ=255)

                                                            cgtcACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGa                                                                           >  2:788312/1‑148 (MQ=255)

                                                              tcACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTg                                                                                      <  2:453939/135‑1 (MQ=255)

                                                               cACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGa                                                                           >  4:479855/1‑145 (MQ=255)

                                                                 cTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTg                                                                                                  >  3:1863/1‑120 (MQ=255)

                                                                  tGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACt                                                                     >  3:998971/1‑148 (MQ=255)

                                                                   gggAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACtt                                                                    >  4:605408/1‑148 (MQ=255)

                                                                          gCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCtat                                                             <  1:693712/148‑1 (MQ=255)

                                                                            ttATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGAt                                                                                                                    >  4:426503/1‑91 (MQ=255)

                                                                            ttATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGAt                                                                                                                    <  3:426503/91‑1 (MQ=255)

                                                                             tATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATg                                                          <  1:788312/148‑1 (MQ=255)

                                                                               ggctatgtggatctaccaggtccacaaccattttgccaTCCTGTTCTTTGCCGAACAGGAt                                                                                                                                               >  2:1068155‑M1/39‑61 (MQ=255)

                                                                                gTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGAcc                                                                                                                            >  1:130533/1‑79 (MQ=255)

                                                                                    aaGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGt                                                                                                                        <  3:1130108/79‑1 (MQ=255)

                                                                                    aaGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGt                                                                                                                        >  4:1130108/1‑79 (MQ=255)

                                                                                     aGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCt                                                                                                                           >  1:938478/1‑75 (MQ=255)

                                                                                     aGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCt                                                                                                                           <  2:938478/75‑1 (MQ=255)

                                                                                      gCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAAcatc                                                 <  2:306070/148‑1 (MQ=255)

                                                                                       cTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCtat                                                             >  3:61623/1‑135 (MQ=255)

                                                                                        tGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGTCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAAcatcat                                               <  2:854890/148‑1 (MQ=255)

                                                                                          aaCAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTc                                             >  4:571302/1‑148 (MQ=255)

                                                                                            cAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTg                                           >  1:54092/1‑148 (MQ=255)

                                                                                             aGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGa                                          <  2:54092/148‑1 (MQ=255)

                                                                                             aGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGa                                          <  3:571302/148‑1 (MQ=255)

                                                                                                aCAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGAGCTATATGCCGAACATCATTCGGCTGc                                       >  4:733579/1‑148 (MQ=255)

                                                                                                   aGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGAc                                                                                                                             >  3:691667/1‑59 (MQ=255)

                                                                                                   aGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGa                                                                       <  2:348983/113‑1 (MQ=255)

                                                                                                   aGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTa                                    >  1:380599/1‑148 (MQ=255)

                                                                                                   aGATTGTTCGTCCCGATTTCCTGTTCCTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCta                                                              >  2:990069/1‑122 (MQ=255)

                                                                                                     aTTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGaa                                                                          <  2:398126/108‑1 (MQ=255)

                                                                                                     aTTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGaa                                                                          >  1:398126/1‑108 (MQ=255)

                                                                                                      ttGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTgcg                                                                 <  4:73138/116‑1 (MQ=255)

                                                                                                      ttGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCta                                                              >  4:395367/1‑119 (MQ=255)

                                                                                                      ttGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGc                                       >  2:1125789/1‑142 (MQ=255)

                                                                                                      ttGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGc                                       <  1:1125789/142‑1 (MQ=255)

                                                                                                            gTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAGGcgaat                           <  1:76889/148‑1 (MQ=255)

                                                                                                             tCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGt                                                                                                                                    <  1:421535/42‑1 (MQ=255)

                                                                                                             tCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGt                                                                                                                                    >  2:421535/1‑42 (MQ=255)

                                                                                                              cccGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGAt                                                                                            <  4:942674/81‑1 (MQ=255)

                                                                                                                cGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCcaca                                                                                                               >  1:1050330/1‑60 (MQ=255)

                                                                                                                cGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGa                                          <  1:267141/129‑1 (MQ=255)

                                                                                                                cGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGa                                          >  2:267141/1‑129 (MQ=255)

                                                                                                                 gATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTg                                                                                                                          <  2:184870/48‑1 (MQ=255)

                                                                                                                 gATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTg                                                                                                                          >  1:184870/1‑48 (MQ=255)

                                                                                                                   tttCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCt                                      >  1:346078/1‑130 (MQ=255)

                                                                                                                    atcctgttcggcaaagaacaggaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGcc                                                                                                          >  2:1068155‑M2/24‑61 (MQ=255)

                                                                                                                    atcctgttcggcaaagaacaggaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGcc                                                                                                          <  1:1068155‑M2/38‑1 (MQ=255)

                                                                                                                    atcctgttcggcaaagaacaggaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTg                                           <  2:22342‑M2/101‑1 (MQ=255)

                                                                                                                    atcctgttcggcaaagaacaggaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTg                                           >  1:602155‑M2/24‑124 (MQ=255)

                                                                                                                    atcctgttcggcaaagaacaggaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTg                                           >  1:22342‑M2/24‑124 (MQ=255)

                                                                                                                     tcctgttcggcaaagaacaggaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAGGCGAATCGAATCTGt                  >  1:818598‑M2/23‑148 (MQ=255)

                                                                                                                       CTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCtt                                                                                        >  2:787621‑M1/1‑76 (MQ=255)

                                                                                                                        TGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTg                                                                                              <  3:110043‑M1/69‑1 (MQ=255)

                                                                                                                        TGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCaa                                                                                 <  3:299675‑M1/82‑1 (MQ=255)

                                                                                                                         gttcggcaaagaacaggaTGGCAAAATGGTTGTGGACCTGGTAGATCcac                                                                                                                >  4:856557‑M2/19‑50 (MQ=255)

                                                                                                                         GTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAg                                 <  4:295326‑M1/129‑1 (MQ=255)

                                                                                                                         GTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAg                                 >  3:295326‑M1/1‑129 (MQ=255)

                                                                                                                          TTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAGGCGAATCGAATCTGt                  <  2:639879‑M1/143‑1 (MQ=255)

                                                                                                                          TTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAGGCGAATCGAATCTGt                  >  1:639879‑M1/1‑143 (MQ=255)

                                                                                                                             tttGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGa                                                      >  3:915723/1‑104 (MQ=255)

                                                                                                                             tttGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGa                                                      <  4:915723/104‑1 (MQ=255)

                                                                                                                              ttGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCtat                                                             <  2:213988/96‑1 (MQ=255)

                                                                                                                                aaagaacaggaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAGGCGAATCGAATCTGTCGCCGAAGTaa       <  2:818598‑M2/137‑1 (MQ=255)

                                                                                                                                 ccGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAGGcgaat                           >  3:460172/1‑127 (MQ=255)

                                                                                                                                  cGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGa                                                                           >  2:1043432/1‑78 (MQ=255)

                                                                                                                                  cGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGa                                                                           <  1:1043432/78‑1 (MQ=255)

                                                                                                                                   gaacaggaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTg                                                                                      >  4:619382‑M2/9‑66 (MQ=255)

                                                                                                                                    aacaggaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAGGCGAATCGAATCTGTCGCCGAAGTAAAggg   >  2:527153‑M2/8‑148 (MQ=255)

                                                                                                                                        ggaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCtt                                     <  3:908684‑M2/107‑1 (MQ=255)

                                                                                                                                        ggaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCtt                                     >  4:908684‑M2/4‑110 (MQ=255)

                                                                                                                                         gaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATc                                                                                                    <  1:727163‑M2/44‑1 (MQ=255)

                                                                                                                                         gaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATc                                                                                                    >  2:727163‑M2/3‑46 (MQ=255)

                                                                                                                                         gaTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAAcatcat                                               >  4:185421‑M2/3‑99 (MQ=255)

                                                                                                                                          aTGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGc                                       <  4:1127522‑M2/105‑1 (MQ=255)

TCGAAACCAAACGTGAAGGATTTGCTTTCTGGTATCGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAGGCGAATCGAATCTGTCGCCGAAGTAAAGGGT  >  NC_000913/291843‑292123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.