| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 632148 | NA (NA) | 8 (0.090) | 6/184 | NT | NA | noncoding (34/34 nt) | REP55 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP55 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 2673806 = | NA (NA) | noncoding (31/34 nt) | REP185 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP185 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
TCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACAGAAGAAAT > NC_000913/2673698‑2673946 | tCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTAc < 3:56017/122‑1 (MQ=255)tCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTAc > 4:56017/1‑122 (MQ=255) gCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCAtt > 2:202507/1‑89 (MQ=255) gCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCAtt < 1:202507/89‑1 (MQ=255) tctctcGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTcccc > 1:10653/1‑113 (MQ=255) tctctcGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTcccc < 2:10653/113‑1 (MQ=255) gccggataaggcgttcacgccgcatccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAgt > 3:379063‑M2/31‑76 (MQ=255) gccggataaggcgttcacgccgcatccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAgt < 4:379063‑M2/46‑1 (MQ=255) gATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTTAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCgatgatga < 2:542430/127‑1 (MQ=255) gATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCgatgatga > 1:542430/1‑127 (MQ=255) ataaggcgttcacgccgcatccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTcccc > 4:1084216‑M2/26‑83 (MQ=255) ataaggcgttcacgccgcatccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTcccc < 3:1084216‑M2/58‑1 (MQ=255) ataaggcgttcacgccgcatccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATg > 2:498515‑M2/26‑99 (MQ=255) ataaggcgttcacgccgcatccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATg < 1:498515‑M2/74‑1 (MQ=255) ataaggcgttcacgccgcatccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCgatgatg > 2:89077‑M2/26‑125 (MQ=255) ataaggcgttcacgccgcatccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCgatgatg < 1:89077‑M2/100‑1 (MQ=255) cggcgTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCa < 2:589957/52‑1 (MQ=255) cggcgTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCa > 1:589957/1‑52 (MQ=255) aCGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGCAgttgt > 3:464420/1‑63 (MQ=255) aCGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAgttgt < 4:464420/63‑1 (MQ=255) aCGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTcc < 1:132403/142‑1 (MQ=255) aCGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTcc > 2:132403/1‑142 (MQ=255) ccTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACagaag > 3:649026/1‑148 (MQ=255) atccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACAGAAGAAAt < 4:649026‑M2/141‑1 (MQ=255) ccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAgttg < 3:623848‑M2/48‑1 (MQ=255) ccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAgttg > 4:623848‑M2/6‑53 (MQ=255) ccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCcag > 3:345466‑M2/6‑135 (MQ=255) ccggcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCcag < 4:345466‑M2/130‑1 (MQ=255) gcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCgatgatgat < 2:285610‑M2/102‑1 (MQ=255) gcATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCgatgatgat > 1:285610‑M2/3‑104 (MQ=255) | TCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACAGAAGAAAT > NC_000913/2673698‑2673946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |